Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_28530 and AO356_28535 are separated by 13 nucleotides AO356_28535 and AO356_28540 are separated by 17 nucleotides
AO356_28530: AO356_28530 - mannonate dehydratase, at 6,630,676 to 6,631,851
_28530
AO356_28535: AO356_28535 - mannitol dehydrogenase, at 6,631,865 to 6,633,322
_28535
AO356_28540: AO356_28540 - D-mannose transporter (from data) , at 6,633,340 to 6,634,632
_28540
Position (kb)
6631
6632
6633
6634 Strain fitness (log2 ratio)
-2
-1
0
1 at 6631.028 kb on + strand, within AO356_28530 at 6631.029 kb on - strand, within AO356_28530 at 6631.029 kb on - strand, within AO356_28530 at 6631.548 kb on - strand, within AO356_28530 at 6631.610 kb on + strand, within AO356_28530 at 6631.726 kb on + strand, within AO356_28530 at 6631.726 kb on + strand, within AO356_28530 at 6631.736 kb on - strand at 6631.955 kb on + strand at 6632.146 kb on + strand, within AO356_28535 at 6632.353 kb on - strand, within AO356_28535 at 6632.430 kb on + strand, within AO356_28535 at 6633.039 kb on + strand, within AO356_28535 at 6633.039 kb on + strand, within AO356_28535 at 6633.039 kb on + strand, within AO356_28535 at 6633.039 kb on + strand, within AO356_28535 at 6633.040 kb on - strand, within AO356_28535 at 6633.040 kb on - strand, within AO356_28535 at 6633.222 kb on + strand at 6633.422 kb on + strand at 6633.423 kb on - strand at 6633.620 kb on + strand, within AO356_28540 at 6633.621 kb on - strand, within AO356_28540 at 6633.638 kb on + strand, within AO356_28540 at 6633.687 kb on + strand, within AO356_28540 at 6633.687 kb on + strand, within AO356_28540 at 6633.688 kb on - strand, within AO356_28540 at 6633.688 kb on - strand, within AO356_28540 at 6633.899 kb on + strand, within AO356_28540 at 6633.935 kb on + strand, within AO356_28540 at 6633.935 kb on + strand, within AO356_28540 at 6633.936 kb on - strand, within AO356_28540 at 6633.936 kb on - strand, within AO356_28540 at 6633.936 kb on - strand, within AO356_28540 at 6633.936 kb on - strand, within AO356_28540 at 6633.939 kb on + strand, within AO356_28540 at 6633.940 kb on - strand, within AO356_28540 at 6633.941 kb on + strand, within AO356_28540 at 6634.134 kb on + strand, within AO356_28540 at 6634.134 kb on + strand, within AO356_28540 at 6634.157 kb on + strand, within AO356_28540 at 6634.157 kb on + strand, within AO356_28540 at 6634.260 kb on - strand, within AO356_28540
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 6,631,028 + AO356_28530 0.30 +0.8 6,631,029 - AO356_28530 0.30 -0.2 6,631,029 - AO356_28530 0.30 -0.2 6,631,548 - AO356_28530 0.74 -0.1 6,631,610 + AO356_28530 0.79 +1.2 6,631,726 + AO356_28530 0.89 -1.9 6,631,726 + AO356_28530 0.89 +1.6 6,631,736 - +0.2 6,631,955 + -0.6 6,632,146 + AO356_28535 0.19 +0.7 6,632,353 - AO356_28535 0.33 +0.3 6,632,430 + AO356_28535 0.39 +0.4 6,633,039 + AO356_28535 0.81 -0.7 6,633,039 + AO356_28535 0.81 +0.3 6,633,039 + AO356_28535 0.81 -0.1 6,633,039 + AO356_28535 0.81 -1.1 6,633,040 - AO356_28535 0.81 -0.6 6,633,040 - AO356_28535 0.81 -0.6 6,633,222 + -0.3 6,633,422 + -0.4 6,633,423 - -1.2 6,633,620 + AO356_28540 0.22 -0.5 6,633,621 - AO356_28540 0.22 -0.4 6,633,638 + AO356_28540 0.23 -0.6 6,633,687 + AO356_28540 0.27 +0.9 6,633,687 + AO356_28540 0.27 -0.4 6,633,688 - AO356_28540 0.27 -1.1 6,633,688 - AO356_28540 0.27 -1.0 6,633,899 + AO356_28540 0.43 -0.9 6,633,935 + AO356_28540 0.46 -0.1 6,633,935 + AO356_28540 0.46 -0.8 6,633,936 - AO356_28540 0.46 -0.5 6,633,936 - AO356_28540 0.46 +0.4 6,633,936 - AO356_28540 0.46 -0.5 6,633,936 - AO356_28540 0.46 -0.4 6,633,939 + AO356_28540 0.46 +0.4 6,633,940 - AO356_28540 0.46 -0.4 6,633,941 + AO356_28540 0.46 -0.4 6,634,134 + AO356_28540 0.61 +0.9 6,634,134 + AO356_28540 0.61 -0.9 6,634,157 + AO356_28540 0.63 +1.7 6,634,157 + AO356_28540 0.63 +0.1 6,634,260 - AO356_28540 0.71 -0.5
Or see this region's nucleotide sequence