Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_19755

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_19750 and AO356_19755 are separated by 130 nucleotidesAO356_19755 and AO356_19760 are separated by 126 nucleotides AO356_19750: AO356_19750 - dienelactone hydrolase, at 4,429,628 to 4,430,356 _19750 AO356_19755: AO356_19755 - pirin, at 4,430,487 to 4,431,347 _19755 AO356_19760: AO356_19760 - 5-oxo-L-prolinase, at 4,431,474 to 4,432,484 _19760 Position (kb) 4430 4431 4432Strain fitness (log2 ratio) -2 -1 0 1at 4429.547 kb on + strandat 4429.547 kb on + strandat 4429.547 kb on + strandat 4429.548 kb on - strandat 4429.548 kb on - strandat 4429.548 kb on - strandat 4429.562 kb on - strandat 4429.562 kb on - strandat 4429.658 kb on + strandat 4429.658 kb on + strandat 4429.659 kb on - strandat 4429.659 kb on - strandat 4429.679 kb on + strandat 4429.679 kb on + strandat 4429.679 kb on + strandat 4429.679 kb on + strandat 4429.680 kb on - strandat 4429.758 kb on + strand, within AO356_19750at 4429.806 kb on - strand, within AO356_19750at 4429.806 kb on - strand, within AO356_19750at 4429.829 kb on + strand, within AO356_19750at 4429.830 kb on - strand, within AO356_19750at 4429.918 kb on + strand, within AO356_19750at 4429.919 kb on - strand, within AO356_19750at 4430.080 kb on + strand, within AO356_19750at 4430.080 kb on + strand, within AO356_19750at 4430.081 kb on - strand, within AO356_19750at 4430.081 kb on - strand, within AO356_19750at 4430.226 kb on - strand, within AO356_19750at 4430.266 kb on + strand, within AO356_19750at 4430.267 kb on - strand, within AO356_19750at 4430.285 kb on + strandat 4430.286 kb on - strandat 4430.286 kb on - strandat 4430.286 kb on - strandat 4430.326 kb on + strandat 4430.326 kb on + strandat 4430.326 kb on + strandat 4430.326 kb on + strandat 4430.326 kb on + strandat 4430.327 kb on - strandat 4430.327 kb on - strandat 4430.410 kb on + strandat 4430.411 kb on - strandat 4430.411 kb on - strandat 4430.411 kb on - strandat 4430.423 kb on + strandat 4430.424 kb on - strandat 4430.488 kb on + strandat 4430.694 kb on + strand, within AO356_19755at 4430.694 kb on + strand, within AO356_19755at 4430.694 kb on + strand, within AO356_19755at 4430.695 kb on - strand, within AO356_19755at 4430.695 kb on - strand, within AO356_19755at 4430.695 kb on - strand, within AO356_19755at 4430.715 kb on + strand, within AO356_19755at 4430.755 kb on + strand, within AO356_19755at 4430.755 kb on + strand, within AO356_19755at 4430.755 kb on + strand, within AO356_19755at 4430.755 kb on + strand, within AO356_19755at 4430.755 kb on + strand, within AO356_19755at 4430.755 kb on + strand, within AO356_19755at 4430.756 kb on - strand, within AO356_19755at 4430.756 kb on - strand, within AO356_19755at 4430.756 kb on - strand, within AO356_19755at 4430.756 kb on - strand, within AO356_19755at 4430.824 kb on + strand, within AO356_19755at 4430.824 kb on + strand, within AO356_19755at 4430.824 kb on + strand, within AO356_19755at 4430.825 kb on - strand, within AO356_19755at 4430.825 kb on - strand, within AO356_19755at 4430.944 kb on + strand, within AO356_19755at 4430.945 kb on - strand, within AO356_19755at 4430.945 kb on - strand, within AO356_19755at 4430.945 kb on - strand, within AO356_19755at 4430.965 kb on + strand, within AO356_19755at 4430.966 kb on - strand, within AO356_19755at 4431.151 kb on + strand, within AO356_19755at 4431.151 kb on + strand, within AO356_19755at 4431.151 kb on + strand, within AO356_19755at 4431.151 kb on + strand, within AO356_19755at 4431.151 kb on + strand, within AO356_19755at 4431.152 kb on - strand, within AO356_19755at 4431.152 kb on - strand, within AO356_19755at 4431.152 kb on - strandat 4431.384 kb on + strandat 4431.385 kb on - strandat 4431.444 kb on + strandat 4431.444 kb on + strandat 4431.444 kb on + strandat 4431.444 kb on + strandat 4431.444 kb on + strandat 4431.444 kb on + strandat 4431.444 kb on + strandat 4431.444 kb on + strandat 4431.445 kb on - strandat 4431.445 kb on - strandat 4431.445 kb on - strandat 4431.445 kb on - strandat 4431.445 kb on - strandat 4431.445 kb on - strandat 4431.445 kb on - strandat 4431.445 kb on - strandat 4431.543 kb on + strandat 4431.543 kb on + strandat 4431.544 kb on - strandat 4431.544 kb on - strandat 4431.549 kb on + strandat 4431.549 kb on + strandat 4431.549 kb on + strandat 4431.550 kb on - strandat 4431.550 kb on - strandat 4431.570 kb on + strandat 4431.570 kb on + strandat 4431.571 kb on - strandat 4431.571 kb on - strandat 4431.711 kb on + strand, within AO356_19760at 4431.711 kb on + strand, within AO356_19760at 4431.711 kb on + strand, within AO356_19760at 4431.736 kb on - strand, within AO356_19760at 4431.736 kb on - strand, within AO356_19760at 4431.993 kb on + strand, within AO356_19760at 4431.993 kb on + strand, within AO356_19760at 4431.993 kb on + strand, within AO356_19760at 4431.994 kb on - strand, within AO356_19760at 4431.994 kb on - strand, within AO356_19760at 4431.994 kb on - strand, within AO356_19760at 4432.040 kb on + strand, within AO356_19760at 4432.041 kb on - strand, within AO356_19760at 4432.071 kb on + strand, within AO356_19760at 4432.072 kb on - strand, within AO356_19760at 4432.072 kb on - strand, within AO356_19760at 4432.072 kb on - strand, within AO356_19760at 4432.113 kb on - strand, within AO356_19760at 4432.227 kb on + strand, within AO356_19760at 4432.227 kb on + strand, within AO356_19760at 4432.227 kb on + strand, within AO356_19760at 4432.260 kb on + strand, within AO356_19760at 4432.261 kb on - strand, within AO356_19760at 4432.261 kb on - strand, within AO356_19760

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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4,429,547 + +0.6
4,429,547 + +0.3
4,429,547 + -0.7
4,429,548 - +0.6
4,429,548 - +0.2
4,429,548 - -0.6
4,429,562 - +0.5
4,429,562 - +0.5
4,429,658 + +0.4
4,429,658 + +0.7
4,429,659 - +0.7
4,429,659 - +0.3
4,429,679 + +0.6
4,429,679 + -2.0
4,429,679 + -0.2
4,429,679 + -0.0
4,429,680 - +0.1
4,429,758 + AO356_19750 0.18 -0.8
4,429,806 - AO356_19750 0.24 -0.0
4,429,806 - AO356_19750 0.24 +0.2
4,429,829 + AO356_19750 0.28 -0.2
4,429,830 - AO356_19750 0.28 -0.7
4,429,918 + AO356_19750 0.40 +0.2
4,429,919 - AO356_19750 0.40 +0.5
4,430,080 + AO356_19750 0.62 -0.2
4,430,080 + AO356_19750 0.62 -0.4
4,430,081 - AO356_19750 0.62 -0.4
4,430,081 - AO356_19750 0.62 -0.0
4,430,226 - AO356_19750 0.82 -0.6
4,430,266 + AO356_19750 0.88 -1.4
4,430,267 - AO356_19750 0.88 -1.5
4,430,285 + +0.2
4,430,286 - -0.5
4,430,286 - -0.0
4,430,286 - -0.0
4,430,326 + +0.5
4,430,326 + +0.3
4,430,326 + +1.0
4,430,326 + -0.4
4,430,326 + +0.4
4,430,327 - +0.6
4,430,327 - -0.2
4,430,410 + +0.6
4,430,411 - -0.1
4,430,411 - -0.0
4,430,411 - +0.1
4,430,423 + -0.1
4,430,424 - -0.4
4,430,488 + +0.3
4,430,694 + AO356_19755 0.24 -0.3
4,430,694 + AO356_19755 0.24 -0.1
4,430,694 + AO356_19755 0.24 -0.1
4,430,695 - AO356_19755 0.24 -0.2
4,430,695 - AO356_19755 0.24 -0.4
4,430,695 - AO356_19755 0.24 -0.8
4,430,715 + AO356_19755 0.26 -0.7
4,430,755 + AO356_19755 0.31 +0.8
4,430,755 + AO356_19755 0.31 -0.4
4,430,755 + AO356_19755 0.31 -0.4
4,430,755 + AO356_19755 0.31 +1.2
4,430,755 + AO356_19755 0.31 -0.4
4,430,755 + AO356_19755 0.31 +1.1
4,430,756 - AO356_19755 0.31 -0.0
4,430,756 - AO356_19755 0.31 -0.4
4,430,756 - AO356_19755 0.31 +0.0
4,430,756 - AO356_19755 0.31 -0.9
4,430,824 + AO356_19755 0.39 +1.0
4,430,824 + AO356_19755 0.39 +0.5
4,430,824 + AO356_19755 0.39 +0.3
4,430,825 - AO356_19755 0.39 +0.5
4,430,825 - AO356_19755 0.39 -0.7
4,430,944 + AO356_19755 0.53 +0.1
4,430,945 - AO356_19755 0.53 -0.2
4,430,945 - AO356_19755 0.53 -0.1
4,430,945 - AO356_19755 0.53 +0.0
4,430,965 + AO356_19755 0.56 -0.2
4,430,966 - AO356_19755 0.56 +0.3
4,431,151 + AO356_19755 0.77 +0.1
4,431,151 + AO356_19755 0.77 +0.7
4,431,151 + AO356_19755 0.77 +0.6
4,431,151 + AO356_19755 0.77 -0.5
4,431,151 + AO356_19755 0.77 -0.3
4,431,152 - AO356_19755 0.77 -2.3
4,431,152 - AO356_19755 0.77 +0.8
4,431,152 - +1.0
4,431,384 + -0.2
4,431,385 - +1.2
4,431,444 + -0.8
4,431,444 + -0.9
4,431,444 + +0.6
4,431,444 + -0.2
4,431,444 + +1.4
4,431,444 + -0.0
4,431,444 + +0.3
4,431,444 + +0.7
4,431,445 - -0.5
4,431,445 - -0.6
4,431,445 - -0.0
4,431,445 - +0.9
4,431,445 - -0.2
4,431,445 - +0.8
4,431,445 - +0.9
4,431,445 - +0.8
4,431,543 + +1.6
4,431,543 + -0.0
4,431,544 - -0.3
4,431,544 - +1.4
4,431,549 + -0.6
4,431,549 + -1.0
4,431,549 + +1.3
4,431,550 - +0.7
4,431,550 - -0.8
4,431,570 + -0.2
4,431,570 + -0.2
4,431,571 - +0.1
4,431,571 - -0.2
4,431,711 + AO356_19760 0.23 -0.2
4,431,711 + AO356_19760 0.23 +0.4
4,431,711 + AO356_19760 0.23 -0.6
4,431,736 - AO356_19760 0.26 +0.8
4,431,736 - AO356_19760 0.26 +0.5
4,431,993 + AO356_19760 0.51 -0.3
4,431,993 + AO356_19760 0.51 -0.1
4,431,993 + AO356_19760 0.51 +0.8
4,431,994 - AO356_19760 0.51 -0.1
4,431,994 - AO356_19760 0.51 +0.6
4,431,994 - AO356_19760 0.51 -0.7
4,432,040 + AO356_19760 0.56 +0.6
4,432,041 - AO356_19760 0.56 -1.1
4,432,071 + AO356_19760 0.59 +0.7
4,432,072 - AO356_19760 0.59 -0.0
4,432,072 - AO356_19760 0.59 +0.1
4,432,072 - AO356_19760 0.59 -0.6
4,432,113 - AO356_19760 0.63 +0.5
4,432,227 + AO356_19760 0.74 -0.4
4,432,227 + AO356_19760 0.74 -0.7
4,432,227 + AO356_19760 0.74 -1.1
4,432,260 + AO356_19760 0.78 -0.6
4,432,261 - AO356_19760 0.78 -0.2
4,432,261 - AO356_19760 0.78 -0.6

Or see this region's nucleotide sequence