Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_14260 and AO356_14265 are separated by 126 nucleotides AO356_14265 and AO356_14270 are separated by 67 nucleotides
AO356_14260: AO356_14260 - diguanylate cyclase, at 3,239,719 to 3,243,462
_14260
AO356_14265: AO356_14265 - RNA polymerase subunit sigma-70, at 3,243,589 to 3,245,436
_14265
AO356_14270: AO356_14270 - DNA primase, at 3,245,504 to 3,247,462
_14270
Position (kb)
3243
3244
3245
3246 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3242.620 kb on + strand, within AO356_14260 at 3242.655 kb on - strand, within AO356_14260 at 3242.662 kb on + strand, within AO356_14260 at 3242.663 kb on - strand, within AO356_14260 at 3242.663 kb on - strand, within AO356_14260 at 3242.663 kb on - strand, within AO356_14260 at 3242.663 kb on - strand, within AO356_14260 at 3242.684 kb on + strand, within AO356_14260 at 3242.685 kb on - strand, within AO356_14260 at 3242.776 kb on + strand, within AO356_14260 at 3242.776 kb on + strand, within AO356_14260 at 3242.776 kb on + strand, within AO356_14260 at 3242.776 kb on + strand, within AO356_14260 at 3242.776 kb on + strand, within AO356_14260 at 3242.777 kb on - strand, within AO356_14260 at 3242.777 kb on - strand, within AO356_14260 at 3242.777 kb on - strand, within AO356_14260 at 3242.777 kb on - strand, within AO356_14260 at 3242.813 kb on + strand, within AO356_14260 at 3242.819 kb on + strand, within AO356_14260 at 3242.840 kb on + strand, within AO356_14260 at 3242.840 kb on + strand, within AO356_14260 at 3242.840 kb on + strand, within AO356_14260 at 3242.840 kb on + strand, within AO356_14260 at 3242.840 kb on + strand, within AO356_14260 at 3242.840 kb on + strand, within AO356_14260 at 3242.840 kb on + strand, within AO356_14260 at 3242.840 kb on + strand, within AO356_14260 at 3242.840 kb on + strand, within AO356_14260 at 3242.841 kb on - strand, within AO356_14260 at 3242.950 kb on - strand, within AO356_14260 at 3243.008 kb on + strand, within AO356_14260 at 3243.008 kb on + strand, within AO356_14260 at 3243.008 kb on + strand, within AO356_14260 at 3243.008 kb on + strand, within AO356_14260 at 3243.008 kb on + strand, within AO356_14260 at 3243.008 kb on + strand, within AO356_14260 at 3243.008 kb on + strand, within AO356_14260 at 3243.008 kb on + strand, within AO356_14260 at 3243.008 kb on + strand, within AO356_14260 at 3243.008 kb on + strand, within AO356_14260 at 3243.009 kb on - strand, within AO356_14260 at 3243.009 kb on - strand, within AO356_14260 at 3243.009 kb on - strand, within AO356_14260 at 3243.009 kb on - strand, within AO356_14260 at 3243.009 kb on - strand, within AO356_14260 at 3243.009 kb on - strand, within AO356_14260 at 3243.009 kb on - strand, within AO356_14260 at 3243.009 kb on - strand, within AO356_14260 at 3243.009 kb on - strand, within AO356_14260 at 3243.009 kb on - strand, within AO356_14260 at 3243.038 kb on + strand, within AO356_14260 at 3243.038 kb on + strand, within AO356_14260 at 3243.038 kb on + strand, within AO356_14260 at 3243.038 kb on + strand, within AO356_14260 at 3243.038 kb on + strand, within AO356_14260 at 3243.038 kb on + strand, within AO356_14260 at 3243.039 kb on - strand, within AO356_14260 at 3243.039 kb on - strand, within AO356_14260 at 3243.039 kb on - strand, within AO356_14260 at 3243.074 kb on + strand, within AO356_14260 at 3243.075 kb on - strand, within AO356_14260 at 3243.075 kb on - strand, within AO356_14260 at 3243.075 kb on - strand, within AO356_14260 at 3243.118 kb on - strand at 3243.128 kb on + strand at 3243.128 kb on + strand at 3243.129 kb on - strand at 3243.129 kb on - strand at 3243.166 kb on + strand at 3243.166 kb on + strand at 3243.166 kb on + strand at 3243.166 kb on + strand at 3243.167 kb on - strand at 3243.167 kb on - strand at 3243.199 kb on + strand at 3243.269 kb on + strand at 3243.269 kb on + strand at 3243.269 kb on + strand at 3243.269 kb on + strand at 3243.269 kb on + strand at 3243.270 kb on - strand at 3243.270 kb on - strand at 3243.290 kb on + strand at 3243.501 kb on + strand at 3243.501 kb on + strand at 3243.501 kb on + strand at 3243.501 kb on + strand at 3243.502 kb on - strand at 3243.543 kb on + strand at 3243.543 kb on + strand at 3243.543 kb on + strand at 3243.543 kb on + strand at 3243.544 kb on - strand at 3243.554 kb on - strand at 3243.554 kb on - strand at 3245.489 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 3,242,620 + AO356_14260 0.77 +0.2 3,242,655 - AO356_14260 0.78 +0.5 3,242,662 + AO356_14260 0.79 -0.3 3,242,663 - AO356_14260 0.79 -0.1 3,242,663 - AO356_14260 0.79 +0.7 3,242,663 - AO356_14260 0.79 -0.4 3,242,663 - AO356_14260 0.79 -1.0 3,242,684 + AO356_14260 0.79 -1.1 3,242,685 - AO356_14260 0.79 +0.1 3,242,776 + AO356_14260 0.82 +0.6 3,242,776 + AO356_14260 0.82 -0.8 3,242,776 + AO356_14260 0.82 +0.3 3,242,776 + AO356_14260 0.82 +0.9 3,242,776 + AO356_14260 0.82 +0.2 3,242,777 - AO356_14260 0.82 +0.3 3,242,777 - AO356_14260 0.82 +0.8 3,242,777 - AO356_14260 0.82 +0.3 3,242,777 - AO356_14260 0.82 -0.6 3,242,813 + AO356_14260 0.83 +0.6 3,242,819 + AO356_14260 0.83 -0.2 3,242,840 + AO356_14260 0.83 +0.1 3,242,840 + AO356_14260 0.83 +1.0 3,242,840 + AO356_14260 0.83 +1.0 3,242,840 + AO356_14260 0.83 +0.1 3,242,840 + AO356_14260 0.83 -0.5 3,242,840 + AO356_14260 0.83 +0.5 3,242,840 + AO356_14260 0.83 +0.8 3,242,840 + AO356_14260 0.83 -0.8 3,242,840 + AO356_14260 0.83 -0.7 3,242,841 - AO356_14260 0.83 +0.2 3,242,950 - AO356_14260 0.86 +0.7 3,243,008 + AO356_14260 0.88 +0.0 3,243,008 + AO356_14260 0.88 +0.3 3,243,008 + AO356_14260 0.88 +1.9 3,243,008 + AO356_14260 0.88 +0.6 3,243,008 + AO356_14260 0.88 -0.6 3,243,008 + AO356_14260 0.88 -0.6 3,243,008 + AO356_14260 0.88 +0.8 3,243,008 + AO356_14260 0.88 +1.0 3,243,008 + AO356_14260 0.88 +0.0 3,243,008 + AO356_14260 0.88 +0.3 3,243,009 - AO356_14260 0.88 +0.4 3,243,009 - AO356_14260 0.88 -0.1 3,243,009 - AO356_14260 0.88 -0.7 3,243,009 - AO356_14260 0.88 +0.1 3,243,009 - AO356_14260 0.88 +1.5 3,243,009 - AO356_14260 0.88 +0.5 3,243,009 - AO356_14260 0.88 -0.3 3,243,009 - AO356_14260 0.88 +1.0 3,243,009 - AO356_14260 0.88 +0.0 3,243,009 - AO356_14260 0.88 +0.2 3,243,038 + AO356_14260 0.89 -0.0 3,243,038 + AO356_14260 0.89 -0.7 3,243,038 + AO356_14260 0.89 +0.3 3,243,038 + AO356_14260 0.89 +0.3 3,243,038 + AO356_14260 0.89 +0.4 3,243,038 + AO356_14260 0.89 +0.9 3,243,039 - AO356_14260 0.89 +0.1 3,243,039 - AO356_14260 0.89 +0.0 3,243,039 - AO356_14260 0.89 -1.2 3,243,074 + AO356_14260 0.90 +0.0 3,243,075 - AO356_14260 0.90 +1.5 3,243,075 - AO356_14260 0.90 +2.0 3,243,075 - AO356_14260 0.90 +0.0 3,243,118 - -1.7 3,243,128 + -0.8 3,243,128 + +0.9 3,243,129 - -0.7 3,243,129 - -0.5 3,243,166 + +0.3 3,243,166 + -0.3 3,243,166 + -0.5 3,243,166 + +0.1 3,243,167 - +0.5 3,243,167 - -0.4 3,243,199 + +1.2 3,243,269 + -1.6 3,243,269 + +1.7 3,243,269 + +0.5 3,243,269 + -0.0 3,243,269 + -0.9 3,243,270 - -3.0 3,243,270 - +0.7 3,243,290 + -1.0 3,243,501 + +0.6 3,243,501 + -0.8 3,243,501 + +0.8 3,243,501 + -0.5 3,243,502 - +0.4 3,243,543 + -0.4 3,243,543 + -0.7 3,243,543 + +0.8 3,243,543 + -0.3 3,243,544 - +2.3 3,243,554 - -0.1 3,243,554 - -0.5 3,245,489 - +0.0
Or see this region's nucleotide sequence