Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_13915 and AO356_13920 are separated by 13 nucleotides AO356_13920 and AO356_13925 are separated by 320 nucleotides
AO356_13915: AO356_13915 - electron transfer flavoprotein subunit alpha, at 3,155,879 to 3,157,099
_13915
AO356_13920: AO356_13920 - electron transfer flavoprotein subunit beta, at 3,157,113 to 3,157,883
_13920
AO356_13925: AO356_13925 - acetyltransferase, at 3,158,204 to 3,158,770
_13925
Position (kb)
3157
3158 Strain fitness (log2 ratio)
-2
-1
0
1 at 3156.129 kb on + strand, within AO356_13915 at 3156.129 kb on + strand, within AO356_13915 at 3156.130 kb on - strand, within AO356_13915 at 3156.146 kb on + strand, within AO356_13915 at 3156.146 kb on + strand, within AO356_13915 at 3156.146 kb on + strand, within AO356_13915 at 3156.146 kb on + strand, within AO356_13915 at 3156.147 kb on - strand, within AO356_13915 at 3156.147 kb on - strand, within AO356_13915 at 3156.147 kb on - strand, within AO356_13915 at 3156.147 kb on - strand, within AO356_13915 at 3156.147 kb on - strand, within AO356_13915 at 3156.147 kb on - strand, within AO356_13915 at 3156.315 kb on + strand, within AO356_13915 at 3156.893 kb on + strand, within AO356_13915 at 3156.893 kb on + strand, within AO356_13915 at 3156.894 kb on - strand, within AO356_13915 at 3156.894 kb on - strand, within AO356_13915 at 3156.894 kb on - strand, within AO356_13915 at 3156.894 kb on - strand, within AO356_13915 at 3156.894 kb on - strand, within AO356_13915 at 3157.067 kb on + strand at 3157.097 kb on + strand at 3157.097 kb on + strand at 3157.097 kb on + strand at 3157.097 kb on + strand at 3157.098 kb on - strand at 3157.106 kb on + strand at 3157.106 kb on + strand at 3157.106 kb on + strand at 3157.106 kb on + strand at 3157.107 kb on - strand at 3157.107 kb on - strand at 3157.107 kb on - strand at 3157.107 kb on - strand at 3157.118 kb on + strand at 3157.620 kb on + strand, within AO356_13920 at 3157.620 kb on + strand, within AO356_13920 at 3157.621 kb on - strand, within AO356_13920 at 3157.621 kb on - strand, within AO356_13920 at 3157.893 kb on + strand at 3157.893 kb on + strand at 3157.894 kb on - strand at 3157.894 kb on - strand at 3157.894 kb on - strand at 3157.936 kb on + strand at 3157.936 kb on + strand at 3157.936 kb on + strand at 3157.937 kb on - strand at 3158.002 kb on + strand at 3158.003 kb on - strand at 3158.199 kb on + strand at 3158.199 kb on + strand at 3158.200 kb on - strand at 3158.211 kb on + strand at 3158.211 kb on + strand at 3158.212 kb on - strand at 3158.212 kb on - strand at 3158.212 kb on - strand at 3158.291 kb on + strand, within AO356_13925 at 3158.292 kb on - strand, within AO356_13925 at 3158.292 kb on - strand, within AO356_13925 at 3158.292 kb on - strand, within AO356_13925 at 3158.292 kb on - strand, within AO356_13925 at 3158.292 kb on - strand, within AO356_13925 at 3158.435 kb on + strand, within AO356_13925 at 3158.435 kb on + strand, within AO356_13925 at 3158.435 kb on + strand, within AO356_13925 at 3158.435 kb on + strand, within AO356_13925 at 3158.435 kb on + strand, within AO356_13925 at 3158.435 kb on + strand, within AO356_13925 at 3158.436 kb on - strand, within AO356_13925 at 3158.436 kb on - strand, within AO356_13925 at 3158.436 kb on - strand, within AO356_13925 at 3158.436 kb on - strand, within AO356_13925 at 3158.436 kb on - strand, within AO356_13925 at 3158.436 kb on - strand, within AO356_13925 at 3158.492 kb on + strand, within AO356_13925 at 3158.522 kb on + strand, within AO356_13925 at 3158.522 kb on + strand, within AO356_13925 at 3158.522 kb on + strand, within AO356_13925 at 3158.522 kb on + strand, within AO356_13925 at 3158.522 kb on + strand, within AO356_13925 at 3158.522 kb on + strand, within AO356_13925 at 3158.522 kb on + strand, within AO356_13925 at 3158.523 kb on - strand, within AO356_13925 at 3158.523 kb on - strand, within AO356_13925 at 3158.523 kb on - strand, within AO356_13925 at 3158.523 kb on - strand, within AO356_13925 at 3158.524 kb on + strand, within AO356_13925 at 3158.524 kb on + strand, within AO356_13925 at 3158.525 kb on - strand, within AO356_13925 at 3158.525 kb on - strand, within AO356_13925 at 3158.525 kb on - strand, within AO356_13925 at 3158.525 kb on - strand, within AO356_13925 at 3158.525 kb on - strand, within AO356_13925 at 3158.557 kb on + strand, within AO356_13925 at 3158.557 kb on + strand, within AO356_13925 at 3158.558 kb on - strand, within AO356_13925 at 3158.642 kb on + strand, within AO356_13925 at 3158.672 kb on + strand, within AO356_13925 at 3158.673 kb on - strand, within AO356_13925 at 3158.736 kb on + strand at 3158.737 kb on - strand at 3158.750 kb on + strand at 3158.751 kb on - strand at 3158.751 kb on - strand at 3158.823 kb on + strand at 3158.823 kb on + strand at 3158.823 kb on + strand at 3158.823 kb on + strand at 3158.824 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 3,156,129 + AO356_13915 0.20 +1.1 3,156,129 + AO356_13915 0.20 +0.2 3,156,130 - AO356_13915 0.21 -0.2 3,156,146 + AO356_13915 0.22 +0.6 3,156,146 + AO356_13915 0.22 -0.4 3,156,146 + AO356_13915 0.22 -0.2 3,156,146 + AO356_13915 0.22 -0.2 3,156,147 - AO356_13915 0.22 +0.9 3,156,147 - AO356_13915 0.22 +0.1 3,156,147 - AO356_13915 0.22 -0.2 3,156,147 - AO356_13915 0.22 +1.1 3,156,147 - AO356_13915 0.22 +0.3 3,156,147 - AO356_13915 0.22 +0.6 3,156,315 + AO356_13915 0.36 +0.5 3,156,893 + AO356_13915 0.83 +0.0 3,156,893 + AO356_13915 0.83 -0.4 3,156,894 - AO356_13915 0.83 -0.5 3,156,894 - AO356_13915 0.83 -0.2 3,156,894 - AO356_13915 0.83 +0.1 3,156,894 - AO356_13915 0.83 +0.7 3,156,894 - AO356_13915 0.83 -1.5 3,157,067 + -0.6 3,157,097 + +0.2 3,157,097 + +0.7 3,157,097 + +0.2 3,157,097 + -0.9 3,157,098 - +0.9 3,157,106 + +1.0 3,157,106 + -0.8 3,157,106 + -0.4 3,157,106 + -0.9 3,157,107 - -0.7 3,157,107 - -0.9 3,157,107 - -0.2 3,157,107 - +0.6 3,157,118 + -0.1 3,157,620 + AO356_13920 0.66 -1.6 3,157,620 + AO356_13920 0.66 -0.3 3,157,621 - AO356_13920 0.66 -1.2 3,157,621 - AO356_13920 0.66 +0.3 3,157,893 + -0.9 3,157,893 + +1.0 3,157,894 - -0.6 3,157,894 - +1.4 3,157,894 - +0.3 3,157,936 + +0.1 3,157,936 + -0.2 3,157,936 + -0.4 3,157,937 - -0.3 3,158,002 + +0.5 3,158,003 - +0.2 3,158,199 + -0.2 3,158,199 + -0.7 3,158,200 - +0.3 3,158,211 + +0.3 3,158,211 + +0.8 3,158,212 - +0.1 3,158,212 - +0.7 3,158,212 - -1.2 3,158,291 + AO356_13925 0.15 -0.8 3,158,292 - AO356_13925 0.16 +0.5 3,158,292 - AO356_13925 0.16 +0.1 3,158,292 - AO356_13925 0.16 -0.1 3,158,292 - AO356_13925 0.16 -0.8 3,158,292 - AO356_13925 0.16 +0.6 3,158,435 + AO356_13925 0.41 -0.4 3,158,435 + AO356_13925 0.41 +0.8 3,158,435 + AO356_13925 0.41 -0.0 3,158,435 + AO356_13925 0.41 +0.8 3,158,435 + AO356_13925 0.41 +0.2 3,158,435 + AO356_13925 0.41 +0.2 3,158,436 - AO356_13925 0.41 -0.8 3,158,436 - AO356_13925 0.41 +0.3 3,158,436 - AO356_13925 0.41 -0.4 3,158,436 - AO356_13925 0.41 -0.5 3,158,436 - AO356_13925 0.41 +0.9 3,158,436 - AO356_13925 0.41 -2.4 3,158,492 + AO356_13925 0.51 -0.6 3,158,522 + AO356_13925 0.56 -0.9 3,158,522 + AO356_13925 0.56 -0.0 3,158,522 + AO356_13925 0.56 +0.4 3,158,522 + AO356_13925 0.56 -0.2 3,158,522 + AO356_13925 0.56 +0.3 3,158,522 + AO356_13925 0.56 +0.1 3,158,522 + AO356_13925 0.56 -0.1 3,158,523 - AO356_13925 0.56 -1.7 3,158,523 - AO356_13925 0.56 +0.8 3,158,523 - AO356_13925 0.56 -0.9 3,158,523 - AO356_13925 0.56 +1.2 3,158,524 + AO356_13925 0.56 +0.1 3,158,524 + AO356_13925 0.56 -0.6 3,158,525 - AO356_13925 0.57 +0.4 3,158,525 - AO356_13925 0.57 +0.1 3,158,525 - AO356_13925 0.57 -0.7 3,158,525 - AO356_13925 0.57 +0.1 3,158,525 - AO356_13925 0.57 +0.2 3,158,557 + AO356_13925 0.62 +0.2 3,158,557 + AO356_13925 0.62 -0.5 3,158,558 - AO356_13925 0.62 -0.2 3,158,642 + AO356_13925 0.77 +1.6 3,158,672 + AO356_13925 0.83 +0.2 3,158,673 - AO356_13925 0.83 +0.5 3,158,736 + +0.7 3,158,737 - -0.1 3,158,750 + +0.5 3,158,751 - -0.6 3,158,751 - +0.1 3,158,823 + -0.6 3,158,823 + +0.9 3,158,823 + -0.7 3,158,823 + -0.1 3,158,824 - -0.2
Or see this region's nucleotide sequence