Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_11575

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_11570 and AO356_11575 are separated by 329 nucleotidesAO356_11575 and AO356_11580 overlap by 4 nucleotidesAO356_11580 and AO356_11585 are separated by 134 nucleotides AO356_11570: AO356_11570 - hypothetical protein, at 2,620,423 to 2,621,148 _11570 AO356_11575: AO356_11575 - transposase, at 2,621,478 to 2,621,783 _11575 AO356_11580: AO356_11580 - transposase, at 2,621,780 to 2,622,616 _11580 AO356_11585: AO356_11585 - lipid A biosynthesis lauroyl acyltransferase, at 2,622,751 to 2,623,638 _11585 Position (kb) 2621 2622Strain fitness (log2 ratio) -2 -1 0 1 2at 2620.622 kb on + strand, within AO356_11570at 2620.635 kb on - strand, within AO356_11570at 2620.821 kb on - strand, within AO356_11570at 2620.821 kb on - strand, within AO356_11570at 2620.821 kb on - strand, within AO356_11570at 2620.922 kb on + strand, within AO356_11570at 2620.922 kb on + strand, within AO356_11570at 2620.923 kb on - strand, within AO356_11570at 2620.966 kb on - strand, within AO356_11570at 2620.966 kb on - strand, within AO356_11570at 2621.015 kb on + strand, within AO356_11570at 2621.015 kb on + strand, within AO356_11570at 2621.015 kb on + strand, within AO356_11570at 2621.015 kb on + strand, within AO356_11570at 2621.015 kb on + strand, within AO356_11570at 2621.015 kb on + strand, within AO356_11570at 2621.015 kb on + strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.016 kb on - strand, within AO356_11570at 2621.050 kb on + strand, within AO356_11570at 2621.050 kb on + strand, within AO356_11570at 2621.050 kb on + strand, within AO356_11570at 2621.051 kb on - strand, within AO356_11570at 2621.051 kb on - strand, within AO356_11570at 2621.121 kb on + strandat 2621.121 kb on + strandat 2621.121 kb on + strandat 2621.121 kb on + strandat 2621.121 kb on + strandat 2621.122 kb on - strandat 2621.122 kb on - strandat 2621.172 kb on + strandat 2621.172 kb on + strandat 2621.172 kb on + strandat 2621.173 kb on - strandat 2621.173 kb on - strandat 2621.173 kb on - strandat 2621.173 kb on - strandat 2621.173 kb on - strandat 2621.173 kb on - strandat 2621.173 kb on - strandat 2621.173 kb on - strandat 2621.173 kb on - strandat 2621.206 kb on + strandat 2621.206 kb on + strandat 2621.206 kb on + strandat 2621.206 kb on + strandat 2621.206 kb on + strandat 2621.207 kb on - strandat 2621.207 kb on - strandat 2621.238 kb on + strandat 2621.238 kb on + strandat 2621.238 kb on + strandat 2621.238 kb on + strandat 2621.238 kb on + strandat 2621.238 kb on + strandat 2621.238 kb on + strandat 2621.238 kb on + strandat 2621.238 kb on + strandat 2621.238 kb on + strandat 2621.238 kb on + strandat 2621.239 kb on - strandat 2621.239 kb on - strandat 2621.239 kb on - strandat 2621.239 kb on - strandat 2621.239 kb on - strandat 2621.239 kb on - strandat 2621.239 kb on - strandat 2621.239 kb on - strandat 2621.239 kb on - strandat 2621.239 kb on - strandat 2621.239 kb on - strandat 2621.242 kb on + strandat 2621.242 kb on + strandat 2621.242 kb on + strandat 2621.242 kb on + strandat 2621.242 kb on + strandat 2621.242 kb on + strandat 2621.242 kb on + strandat 2621.242 kb on + strandat 2621.242 kb on + strandat 2621.242 kb on + strandat 2621.242 kb on + strandat 2621.242 kb on + strandat 2621.242 kb on + strandat 2621.242 kb on + strandat 2621.242 kb on + strandat 2621.243 kb on - strandat 2621.243 kb on - strandat 2621.243 kb on - strandat 2621.243 kb on - strandat 2621.243 kb on - strandat 2621.243 kb on - strandat 2621.243 kb on - strandat 2621.243 kb on - strandat 2621.243 kb on - strandat 2621.295 kb on + strandat 2621.295 kb on + strandat 2621.295 kb on + strandat 2621.295 kb on + strandat 2621.295 kb on + strandat 2621.295 kb on + strandat 2621.295 kb on + strandat 2621.295 kb on + strandat 2621.295 kb on + strandat 2621.295 kb on + strandat 2621.295 kb on + strandat 2621.295 kb on + strandat 2621.295 kb on + strandat 2621.295 kb on + strandat 2621.295 kb on + strandat 2621.295 kb on + strandat 2621.296 kb on - strandat 2621.296 kb on - strandat 2621.296 kb on - strandat 2621.296 kb on - strandat 2621.296 kb on - strandat 2621.315 kb on + strandat 2621.315 kb on + strandat 2621.315 kb on + strandat 2621.315 kb on + strandat 2621.316 kb on - strandat 2621.316 kb on - strandat 2621.316 kb on - strandat 2621.316 kb on - strandat 2621.424 kb on - strandat 2621.424 kb on - strandat 2621.424 kb on - strandat 2621.424 kb on - strandat 2621.424 kb on - strandat 2621.424 kb on - strandat 2621.427 kb on - strandat 2621.444 kb on - strandat 2622.640 kb on + strandat 2622.640 kb on + strandat 2622.640 kb on + strandat 2622.640 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.669 kb on + strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.670 kb on - strandat 2622.673 kb on + strandat 2622.673 kb on + strandat 2622.673 kb on + strandat 2622.673 kb on + strandat 2622.673 kb on + strandat 2622.673 kb on + strandat 2622.674 kb on - strandat 2622.674 kb on - strandat 2622.674 kb on - strandat 2622.674 kb on - strandat 2622.674 kb on - strandat 2622.674 kb on - strandat 2622.674 kb on - strandat 2622.674 kb on - strandat 2622.683 kb on + strandat 2622.683 kb on + strandat 2622.683 kb on + strandat 2622.683 kb on + strandat 2622.684 kb on - strandat 2622.684 kb on - strandat 2622.684 kb on - strandat 2622.684 kb on - strandat 2622.684 kb on - strandat 2622.684 kb on - strandat 2622.734 kb on + strandat 2622.734 kb on + strandat 2622.734 kb on + strandat 2622.734 kb on + strandat 2622.734 kb on + strandat 2622.735 kb on - strandat 2622.735 kb on - strandat 2622.755 kb on + strandat 2622.756 kb on - strandat 2622.756 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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2,620,622 + AO356_11570 0.27 +0.9
2,620,635 - AO356_11570 0.29 -1.2
2,620,821 - AO356_11570 0.55 -1.1
2,620,821 - AO356_11570 0.55 -0.2
2,620,821 - AO356_11570 0.55 -2.0
2,620,922 + AO356_11570 0.69 +0.1
2,620,922 + AO356_11570 0.69 +0.1
2,620,923 - AO356_11570 0.69 +0.7
2,620,966 - AO356_11570 0.75 -0.3
2,620,966 - AO356_11570 0.75 -1.1
2,621,015 + AO356_11570 0.82 +0.5
2,621,015 + AO356_11570 0.82 -0.3
2,621,015 + AO356_11570 0.82 -0.5
2,621,015 + AO356_11570 0.82 +0.2
2,621,015 + AO356_11570 0.82 -0.3
2,621,015 + AO356_11570 0.82 -0.4
2,621,015 + AO356_11570 0.82 +0.9
2,621,016 - AO356_11570 0.82 -0.0
2,621,016 - AO356_11570 0.82 +0.7
2,621,016 - AO356_11570 0.82 +1.2
2,621,016 - AO356_11570 0.82 +0.0
2,621,016 - AO356_11570 0.82 +0.5
2,621,016 - AO356_11570 0.82 -0.7
2,621,016 - AO356_11570 0.82 -0.2
2,621,016 - AO356_11570 0.82 -0.4
2,621,016 - AO356_11570 0.82 -0.5
2,621,016 - AO356_11570 0.82 +0.3
2,621,016 - AO356_11570 0.82 -0.9
2,621,016 - AO356_11570 0.82 -0.5
2,621,016 - AO356_11570 0.82 -0.4
2,621,050 + AO356_11570 0.86 +0.4
2,621,050 + AO356_11570 0.86 +0.0
2,621,050 + AO356_11570 0.86 -1.0
2,621,051 - AO356_11570 0.87 +0.5
2,621,051 - AO356_11570 0.87 +0.1
2,621,121 + +0.3
2,621,121 + +1.5
2,621,121 + +0.1
2,621,121 + +0.9
2,621,121 + +0.3
2,621,122 - +0.7
2,621,122 - -1.9
2,621,172 + -0.8
2,621,172 + +0.9
2,621,172 + -1.3
2,621,173 - -0.2
2,621,173 - -0.8
2,621,173 - -0.1
2,621,173 - +0.4
2,621,173 - +1.1
2,621,173 - -0.7
2,621,173 - -0.5
2,621,173 - -0.6
2,621,173 - -0.0
2,621,206 + +0.1
2,621,206 + -0.6
2,621,206 + +0.5
2,621,206 + -0.1
2,621,206 + -0.4
2,621,207 - +0.4
2,621,207 - +0.5
2,621,238 + +0.4
2,621,238 + +0.1
2,621,238 + -0.5
2,621,238 + +1.0
2,621,238 + +1.1
2,621,238 + +0.8
2,621,238 + -0.1
2,621,238 + -1.0
2,621,238 + +0.6
2,621,238 + -0.3
2,621,238 + -0.4
2,621,239 - +0.5
2,621,239 - -0.4
2,621,239 - -0.7
2,621,239 - +0.6
2,621,239 - +0.0
2,621,239 - -0.0
2,621,239 - +0.6
2,621,239 - -0.8
2,621,239 - -0.4
2,621,239 - -1.1
2,621,239 - -0.5
2,621,242 + +0.4
2,621,242 + +0.3
2,621,242 + +0.6
2,621,242 + +0.5
2,621,242 + +0.1
2,621,242 + +0.6
2,621,242 + +1.6
2,621,242 + +0.3
2,621,242 + -0.0
2,621,242 + -0.7
2,621,242 + +0.2
2,621,242 + +0.8
2,621,242 + +0.4
2,621,242 + +0.3
2,621,242 + +1.2
2,621,243 - +0.4
2,621,243 - +0.3
2,621,243 - -0.1
2,621,243 - -0.1
2,621,243 - -0.0
2,621,243 - -0.1
2,621,243 - +0.0
2,621,243 - +0.3
2,621,243 - +0.6
2,621,295 + +0.3
2,621,295 + +0.0
2,621,295 + +0.4
2,621,295 + -1.0
2,621,295 + +0.0
2,621,295 + +1.1
2,621,295 + -0.4
2,621,295 + -0.0
2,621,295 + -0.9
2,621,295 + +0.2
2,621,295 + +0.1
2,621,295 + +0.8
2,621,295 + +0.6
2,621,295 + -0.6
2,621,295 + +0.7
2,621,295 + +0.3
2,621,296 - +0.6
2,621,296 - +0.3
2,621,296 - +0.5
2,621,296 - +0.2
2,621,296 - -0.8
2,621,315 + +0.7
2,621,315 + +0.6
2,621,315 + +1.2
2,621,315 + +0.2
2,621,316 - +1.0
2,621,316 - -0.2
2,621,316 - -0.1
2,621,316 - -0.3
2,621,424 - +0.0
2,621,424 - +1.1
2,621,424 - +0.4
2,621,424 - +0.4
2,621,424 - +0.9
2,621,424 - -0.5
2,621,427 - +0.2
2,621,444 - +0.5
2,622,640 + +0.1
2,622,640 + -0.1
2,622,640 + +0.1
2,622,640 + -0.4
2,622,669 + -0.5
2,622,669 + +0.4
2,622,669 + +0.1
2,622,669 + +0.4
2,622,669 + +0.9
2,622,669 + +1.1
2,622,669 + -0.4
2,622,669 + +0.2
2,622,669 + +0.0
2,622,669 + -0.1
2,622,669 + -1.5
2,622,669 + +0.3
2,622,669 + -0.5
2,622,669 + +0.0
2,622,669 + +0.1
2,622,669 + -0.6
2,622,669 + -0.3
2,622,669 + +0.2
2,622,669 + -0.3
2,622,669 + +1.4
2,622,669 + +0.3
2,622,669 + +0.1
2,622,669 + +0.3
2,622,669 + +0.7
2,622,669 + -0.4
2,622,669 + -0.5
2,622,670 - +0.2
2,622,670 - -0.1
2,622,670 - +0.0
2,622,670 - -0.1
2,622,670 - +0.1
2,622,670 - +0.2
2,622,670 - +0.5
2,622,670 - +0.4
2,622,670 - +1.2
2,622,670 - -0.1
2,622,670 - -0.8
2,622,670 - +0.2
2,622,670 - +0.2
2,622,670 - +0.6
2,622,670 - +0.1
2,622,670 - +0.4
2,622,670 - +0.1
2,622,670 - +0.3
2,622,670 - +1.9
2,622,670 - +1.1
2,622,670 - -0.3
2,622,670 - -0.0
2,622,670 - -0.2
2,622,670 - +2.3
2,622,670 - -0.1
2,622,670 - -0.2
2,622,670 - +0.7
2,622,670 - -0.4
2,622,670 - -0.9
2,622,670 - +0.4
2,622,670 - -1.1
2,622,670 - +0.7
2,622,670 - -0.7
2,622,670 - +0.2
2,622,670 - +0.6
2,622,673 + +0.3
2,622,673 + +0.8
2,622,673 + -0.2
2,622,673 + +0.3
2,622,673 + +0.7
2,622,673 + +0.5
2,622,674 - -0.5
2,622,674 - -0.6
2,622,674 - +0.5
2,622,674 - +1.9
2,622,674 - +0.9
2,622,674 - -0.6
2,622,674 - +1.6
2,622,674 - -0.1
2,622,683 + -1.2
2,622,683 + +0.9
2,622,683 + +0.7
2,622,683 + +1.0
2,622,684 - +0.3
2,622,684 - +0.4
2,622,684 - -0.8
2,622,684 - +0.2
2,622,684 - +0.0
2,622,684 - -0.7
2,622,734 + +0.1
2,622,734 + +0.8
2,622,734 + +1.3
2,622,734 + +1.0
2,622,734 + +0.8
2,622,735 - +0.7
2,622,735 - +0.8
2,622,755 + -2.0
2,622,756 - -1.1
2,622,756 - -1.1

Or see this region's nucleotide sequence