Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_03790

Experiment: L-Phenylalanine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntAO356_03785 and AO356_03790 are separated by 9 nucleotidesAO356_03790 and AO356_03795 are separated by 231 nucleotides AO356_03785: AO356_03785 - flagellar motor switch protein FliM, at 838,998 to 839,966 _03785 AO356_03790: AO356_03790 - flagellar basal body protein FliL, at 839,976 to 840,479 _03790 AO356_03795: AO356_03795 - flagellar hook-length control protein, at 840,711 to 842,084 _03795 Position (kb) 839 840 841Strain fitness (log2 ratio) -2 -1 0 1 2at 838.981 kb on + strandat 838.981 kb on + strandat 838.981 kb on + strandat 838.981 kb on + strandat 838.981 kb on + strandat 838.981 kb on + strandat 838.982 kb on - strandat 838.982 kb on - strandat 838.982 kb on - strandat 839.099 kb on + strand, within AO356_03785at 839.099 kb on + strand, within AO356_03785at 839.099 kb on + strand, within AO356_03785at 839.099 kb on + strand, within AO356_03785at 839.099 kb on + strand, within AO356_03785at 839.099 kb on + strand, within AO356_03785at 839.099 kb on + strand, within AO356_03785at 839.100 kb on - strand, within AO356_03785at 839.100 kb on - strand, within AO356_03785at 839.100 kb on - strand, within AO356_03785at 839.312 kb on - strand, within AO356_03785at 839.434 kb on + strand, within AO356_03785at 839.434 kb on + strand, within AO356_03785at 839.434 kb on + strand, within AO356_03785at 839.434 kb on + strand, within AO356_03785at 839.434 kb on + strand, within AO356_03785at 839.434 kb on + strand, within AO356_03785at 839.435 kb on - strand, within AO356_03785at 839.435 kb on - strand, within AO356_03785at 839.435 kb on - strand, within AO356_03785at 839.677 kb on + strand, within AO356_03785at 839.677 kb on + strand, within AO356_03785at 839.678 kb on - strand, within AO356_03785at 839.678 kb on - strand, within AO356_03785at 839.693 kb on - strand, within AO356_03785at 839.693 kb on - strand, within AO356_03785at 839.693 kb on - strand, within AO356_03785at 839.693 kb on - strand, within AO356_03785at 839.693 kb on - strand, within AO356_03785at 839.776 kb on + strand, within AO356_03785at 839.776 kb on + strand, within AO356_03785at 839.854 kb on + strand, within AO356_03785at 839.854 kb on + strand, within AO356_03785at 839.855 kb on - strand, within AO356_03785at 839.895 kb on + strandat 839.895 kb on + strandat 839.895 kb on + strandat 839.896 kb on - strandat 839.993 kb on + strandat 839.993 kb on + strandat 839.994 kb on - strandat 839.994 kb on - strandat 840.144 kb on - strand, within AO356_03790at 840.144 kb on - strand, within AO356_03790at 840.209 kb on + strand, within AO356_03790at 840.209 kb on + strand, within AO356_03790at 840.209 kb on + strand, within AO356_03790at 840.209 kb on + strand, within AO356_03790at 840.209 kb on + strand, within AO356_03790at 840.210 kb on - strand, within AO356_03790at 840.210 kb on - strand, within AO356_03790at 840.226 kb on + strand, within AO356_03790at 840.226 kb on + strand, within AO356_03790at 840.226 kb on + strand, within AO356_03790at 840.226 kb on + strand, within AO356_03790at 840.226 kb on + strand, within AO356_03790at 840.226 kb on + strand, within AO356_03790at 840.226 kb on + strand, within AO356_03790at 840.226 kb on + strand, within AO356_03790at 840.227 kb on - strand, within AO356_03790at 840.227 kb on - strand, within AO356_03790at 840.227 kb on - strand, within AO356_03790at 840.250 kb on + strand, within AO356_03790at 840.250 kb on + strand, within AO356_03790at 840.251 kb on - strand, within AO356_03790at 840.251 kb on - strand, within AO356_03790at 840.251 kb on - strand, within AO356_03790at 840.251 kb on - strand, within AO356_03790at 840.251 kb on - strand, within AO356_03790at 840.251 kb on - strand, within AO356_03790at 840.251 kb on - strand, within AO356_03790at 840.358 kb on + strand, within AO356_03790at 840.358 kb on + strand, within AO356_03790at 840.358 kb on + strand, within AO356_03790at 840.359 kb on - strand, within AO356_03790at 840.453 kb on + strandat 840.485 kb on + strandat 840.486 kb on - strandat 840.486 kb on - strandat 840.497 kb on - strandat 840.540 kb on + strandat 840.541 kb on - strandat 840.558 kb on - strandat 840.577 kb on + strandat 840.577 kb on + strandat 840.577 kb on + strandat 840.577 kb on + strandat 840.577 kb on + strandat 840.577 kb on + strandat 840.578 kb on - strandat 840.718 kb on + strandat 840.718 kb on + strandat 840.718 kb on + strandat 840.718 kb on + strandat 840.719 kb on - strandat 840.719 kb on - strandat 840.719 kb on - strandat 840.719 kb on - strandat 840.719 kb on - strandat 840.719 kb on - strandat 840.719 kb on - strandat 840.719 kb on - strandat 840.719 kb on - strandat 840.721 kb on + strandat 840.722 kb on - strandat 840.722 kb on - strandat 840.722 kb on - strandat 840.722 kb on - strandat 840.722 kb on - strandat 840.830 kb on + strandat 840.830 kb on + strandat 840.831 kb on - strandat 840.831 kb on - strandat 840.933 kb on - strand, within AO356_03795at 840.933 kb on - strand, within AO356_03795at 841.111 kb on + strand, within AO356_03795at 841.111 kb on + strand, within AO356_03795at 841.111 kb on + strand, within AO356_03795at 841.111 kb on + strand, within AO356_03795at 841.111 kb on + strand, within AO356_03795at 841.111 kb on + strand, within AO356_03795at 841.111 kb on + strand, within AO356_03795at 841.111 kb on + strand, within AO356_03795at 841.111 kb on + strand, within AO356_03795at 841.111 kb on + strand, within AO356_03795at 841.111 kb on + strand, within AO356_03795at 841.111 kb on + strand, within AO356_03795at 841.111 kb on + strand, within AO356_03795at 841.111 kb on + strand, within AO356_03795at 841.111 kb on + strand, within AO356_03795at 841.112 kb on - strand, within AO356_03795at 841.112 kb on - strand, within AO356_03795at 841.112 kb on - strand, within AO356_03795at 841.112 kb on - strand, within AO356_03795at 841.112 kb on - strand, within AO356_03795at 841.112 kb on - strand, within AO356_03795at 841.163 kb on + strand, within AO356_03795at 841.163 kb on + strand, within AO356_03795at 841.163 kb on + strand, within AO356_03795at 841.164 kb on - strand, within AO356_03795at 841.164 kb on - strand, within AO356_03795at 841.164 kb on - strand, within AO356_03795

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
remove
838,981 + +0.6
838,981 + -0.3
838,981 + -0.2
838,981 + +1.0
838,981 + +1.9
838,981 + +0.1
838,982 - +0.9
838,982 - +0.1
838,982 - -0.3
839,099 + AO356_03785 0.10 -0.1
839,099 + AO356_03785 0.10 -0.7
839,099 + AO356_03785 0.10 +0.3
839,099 + AO356_03785 0.10 -0.1
839,099 + AO356_03785 0.10 +0.8
839,099 + AO356_03785 0.10 +0.3
839,099 + AO356_03785 0.10 +0.7
839,100 - AO356_03785 0.11 -0.0
839,100 - AO356_03785 0.11 +0.7
839,100 - AO356_03785 0.11 -0.1
839,312 - AO356_03785 0.32 -1.3
839,434 + AO356_03785 0.45 -0.3
839,434 + AO356_03785 0.45 -0.1
839,434 + AO356_03785 0.45 +0.4
839,434 + AO356_03785 0.45 +0.7
839,434 + AO356_03785 0.45 -0.7
839,434 + AO356_03785 0.45 +0.2
839,435 - AO356_03785 0.45 +0.3
839,435 - AO356_03785 0.45 -2.3
839,435 - AO356_03785 0.45 +0.6
839,677 + AO356_03785 0.70 +0.9
839,677 + AO356_03785 0.70 +0.0
839,678 - AO356_03785 0.70 -0.4
839,678 - AO356_03785 0.70 +0.6
839,693 - AO356_03785 0.72 -1.0
839,693 - AO356_03785 0.72 +0.3
839,693 - AO356_03785 0.72 +0.5
839,693 - AO356_03785 0.72 -0.2
839,693 - AO356_03785 0.72 +0.4
839,776 + AO356_03785 0.80 +0.9
839,776 + AO356_03785 0.80 +0.8
839,854 + AO356_03785 0.88 +0.5
839,854 + AO356_03785 0.88 +0.7
839,855 - AO356_03785 0.88 +0.1
839,895 + +0.5
839,895 + -0.9
839,895 + -0.5
839,896 - -0.4
839,993 + +0.9
839,993 + +0.6
839,994 - +0.8
839,994 - +1.8
840,144 - AO356_03790 0.33 +0.7
840,144 - AO356_03790 0.33 +1.1
840,209 + AO356_03790 0.46 +0.3
840,209 + AO356_03790 0.46 +0.7
840,209 + AO356_03790 0.46 +0.4
840,209 + AO356_03790 0.46 -0.2
840,209 + AO356_03790 0.46 +0.7
840,210 - AO356_03790 0.46 +1.2
840,210 - AO356_03790 0.46 -0.0
840,226 + AO356_03790 0.50 +0.2
840,226 + AO356_03790 0.50 +0.2
840,226 + AO356_03790 0.50 +0.2
840,226 + AO356_03790 0.50 +0.2
840,226 + AO356_03790 0.50 +0.7
840,226 + AO356_03790 0.50 -0.7
840,226 + AO356_03790 0.50 +0.1
840,226 + AO356_03790 0.50 +0.6
840,227 - AO356_03790 0.50 -1.6
840,227 - AO356_03790 0.50 +0.5
840,227 - AO356_03790 0.50 -0.1
840,250 + AO356_03790 0.54 +1.0
840,250 + AO356_03790 0.54 +0.7
840,251 - AO356_03790 0.55 -1.0
840,251 - AO356_03790 0.55 +0.9
840,251 - AO356_03790 0.55 +0.7
840,251 - AO356_03790 0.55 -0.1
840,251 - AO356_03790 0.55 +0.1
840,251 - AO356_03790 0.55 +1.4
840,251 - AO356_03790 0.55 +0.7
840,358 + AO356_03790 0.76 +1.1
840,358 + AO356_03790 0.76 +0.1
840,358 + AO356_03790 0.76 +0.3
840,359 - AO356_03790 0.76 -0.1
840,453 + +1.1
840,485 + +0.6
840,486 - +0.5
840,486 - +0.1
840,497 - -0.5
840,540 + +0.9
840,541 - +1.4
840,558 - +0.9
840,577 + +1.3
840,577 + -0.2
840,577 + +0.7
840,577 + +0.2
840,577 + -1.2
840,577 + +0.6
840,578 - +0.6
840,718 + -0.6
840,718 + -0.6
840,718 + +0.1
840,718 + -0.3
840,719 - -1.3
840,719 - -0.3
840,719 - -2.0
840,719 - +0.5
840,719 - -0.8
840,719 - +0.9
840,719 - +1.6
840,719 - -0.1
840,719 - -0.1
840,721 + +0.2
840,722 - -0.0
840,722 - -0.3
840,722 - -0.3
840,722 - -0.2
840,722 - +0.1
840,830 + -0.3
840,830 + -1.1
840,831 - -0.5
840,831 - +0.4
840,933 - AO356_03795 0.16 +0.4
840,933 - AO356_03795 0.16 -0.1
841,111 + AO356_03795 0.29 +0.1
841,111 + AO356_03795 0.29 -0.6
841,111 + AO356_03795 0.29 +0.6
841,111 + AO356_03795 0.29 +0.0
841,111 + AO356_03795 0.29 -0.1
841,111 + AO356_03795 0.29 -0.1
841,111 + AO356_03795 0.29 -1.2
841,111 + AO356_03795 0.29 +0.3
841,111 + AO356_03795 0.29 +0.4
841,111 + AO356_03795 0.29 -1.7
841,111 + AO356_03795 0.29 -0.0
841,111 + AO356_03795 0.29 +0.1
841,111 + AO356_03795 0.29 -0.3
841,111 + AO356_03795 0.29 -0.0
841,111 + AO356_03795 0.29 -1.5
841,112 - AO356_03795 0.29 +0.6
841,112 - AO356_03795 0.29 -0.1
841,112 - AO356_03795 0.29 +0.4
841,112 - AO356_03795 0.29 -0.4
841,112 - AO356_03795 0.29 -0.5
841,112 - AO356_03795 0.29 +0.0
841,163 + AO356_03795 0.33 +0.5
841,163 + AO356_03795 0.33 -0.1
841,163 + AO356_03795 0.33 -1.0
841,164 - AO356_03795 0.33 -0.0
841,164 - AO356_03795 0.33 +1.1
841,164 - AO356_03795 0.33 +0.3

Or see this region's nucleotide sequence