Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_03465

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_03460 and AO356_03465 are separated by 13 nucleotidesAO356_03465 and AO356_03470 overlap by 1 nucleotides AO356_03460: AO356_03460 - aspartate aminotransferase, at 769,955 to 771,067 _03460 AO356_03465: AO356_03465 - prephenate dehydratase, at 771,081 to 772,175 _03465 AO356_03470: AO356_03470 - 3-phosphoserine/phosphohydroxythreonine aminotransferase, at 772,175 to 773,260 _03470 Position (kb) 771 772 773Strain fitness (log2 ratio) -1 0 1at 770.097 kb on + strand, within AO356_03460at 770.098 kb on - strand, within AO356_03460at 770.236 kb on - strand, within AO356_03460at 770.374 kb on - strand, within AO356_03460at 770.461 kb on - strand, within AO356_03460at 770.461 kb on - strand, within AO356_03460at 770.470 kb on - strand, within AO356_03460at 770.470 kb on - strand, within AO356_03460at 770.470 kb on - strand, within AO356_03460at 770.692 kb on - strand, within AO356_03460at 770.743 kb on - strand, within AO356_03460at 770.743 kb on - strand, within AO356_03460at 771.012 kb on + strandat 771.216 kb on - strand, within AO356_03465

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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770,097 + AO356_03460 0.13 +1.1
770,098 - AO356_03460 0.13 +0.1
770,236 - AO356_03460 0.25 -0.4
770,374 - AO356_03460 0.38 +0.7
770,461 - AO356_03460 0.45 +1.1
770,461 - AO356_03460 0.45 +0.6
770,470 - AO356_03460 0.46 -0.3
770,470 - AO356_03460 0.46 -0.5
770,470 - AO356_03460 0.46 +0.1
770,692 - AO356_03460 0.66 +0.5
770,743 - AO356_03460 0.71 +0.7
770,743 - AO356_03460 0.71 +0.9
771,012 + +1.6
771,216 - AO356_03465 0.12 +0.7

Or see this region's nucleotide sequence