Experiment: nitrate 0.125 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_717 and Pf6N2E2_718 are separated by 155 nucleotides Pf6N2E2_718 and Pf6N2E2_719 are separated by 88 nucleotides Pf6N2E2_719 and Pf6N2E2_720 overlap by 4 nucleotides
Pf6N2E2_717 - Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR, at 820,718 to 822,250
_717
Pf6N2E2_718 - Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5), at 822,406 to 823,053
_718
Pf6N2E2_719 - Molybdenum cofactor biosynthesis protein MoaB, at 823,142 to 823,696
_719
Pf6N2E2_720 - Molybdopterin biosynthesis protein MoeA, at 823,693 to 824,928
_720
Position (kb) 823
824 Strain fitness (log2 ratio) -1
0
1 at 822.220 kb on + strand at 822.220 kb on + strand at 822.220 kb on + strand at 822.221 kb on - strand at 822.650 kb on - strand, within Pf6N2E2_718 at 822.732 kb on - strand, within Pf6N2E2_718 at 822.732 kb on - strand, within Pf6N2E2_718 at 822.732 kb on - strand, within Pf6N2E2_718 at 822.782 kb on - strand, within Pf6N2E2_718 at 823.067 kb on + strand at 823.067 kb on + strand at 823.067 kb on + strand at 823.068 kb on - strand at 823.068 kb on - strand at 823.084 kb on - strand at 823.193 kb on - strand at 823.303 kb on + strand, within Pf6N2E2_719 at 823.308 kb on - strand, within Pf6N2E2_719 at 823.886 kb on - strand, within Pf6N2E2_720 at 824.228 kb on - strand, within Pf6N2E2_720 at 824.228 kb on - strand, within Pf6N2E2_720 at 824.308 kb on + strand, within Pf6N2E2_720 at 824.308 kb on + strand, within Pf6N2E2_720 at 824.309 kb on - strand, within Pf6N2E2_720 at 824.309 kb on - strand, within Pf6N2E2_720 at 824.325 kb on + strand, within Pf6N2E2_720 at 824.688 kb on - strand, within Pf6N2E2_720
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 0.125 M remove 822,220 + +0.2 822,220 + -1.5 822,220 + -0.0 822,221 - +0.0 822,650 - Pf6N2E2_718 0.38 +0.1 822,732 - Pf6N2E2_718 0.50 +0.8 822,732 - Pf6N2E2_718 0.50 +0.4 822,732 - Pf6N2E2_718 0.50 +0.2 822,782 - Pf6N2E2_718 0.58 +0.2 823,067 + -1.7 823,067 + +1.4 823,067 + +1.4 823,068 - +0.8 823,068 - +1.4 823,084 - -0.0 823,193 - +0.4 823,303 + Pf6N2E2_719 0.29 -0.6 823,308 - Pf6N2E2_719 0.30 -1.0 823,886 - Pf6N2E2_720 0.16 -0.1 824,228 - Pf6N2E2_720 0.43 -1.0 824,228 - Pf6N2E2_720 0.43 -0.6 824,308 + Pf6N2E2_720 0.50 +0.5 824,308 + Pf6N2E2_720 0.50 +1.0 824,309 - Pf6N2E2_720 0.50 -1.1 824,309 - Pf6N2E2_720 0.50 +1.1 824,325 + Pf6N2E2_720 0.51 -1.2 824,688 - Pf6N2E2_720 0.81 +0.7
Or see this region's nucleotide sequence