Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5122

Experiment: nitrate 0.125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 0.125 M
5,904,443	+				+1.5
5,904,443	+				-0.3
5,904,443	+				-1.9
5,904,443	+				-0.3
5,904,443	+				+1.6
5,904,443	+				-3.0
5,904,443	+				+0.2
5,904,443	+				+1.0
5,904,443	+				+0.1
5,904,444	-				+0.0
5,904,444	-				+1.4
5,904,444	-				-0.1
5,904,444	-				-0.4
5,904,447	+				-0.4
5,904,447	+				-1.5
5,904,447	+				-0.0
5,904,448	-				+1.8
5,904,448	-				-0.6
5,904,448	-				-0.8
5,904,469	+				-1.1
5,904,469	+				-0.0
5,904,469	+				+0.1
5,904,469	+				+0.3
5,904,471	+				-1.0
5,904,471	+				+0.2
5,904,471	+				-0.9
5,904,471	+				-0.6
5,904,471	+				+1.0
5,904,471	+				-0.7
5,904,471	+				+0.4
5,904,471	+				-0.2
5,904,471	+				-0.9
5,904,471	+				+1.0
5,904,471	+				-2.5
5,904,471	+				-0.3
5,904,471	+				+1.0
5,904,471	+				-0.3
5,904,472	-				+1.9
5,904,472	-				+0.3
5,904,472	-				-0.9
5,904,472	-				+2.2
5,904,472	-				+1.2
5,904,678	-				+1.0
5,904,678	-				+0.8
5,904,704	+				-0.2
5,904,704	+				-0.3
5,904,705	-				-1.1
5,904,713	+				+0.9
5,904,713	+				-0.3
5,904,713	+				+0.7
5,904,713	+				+0.7
5,904,732	+				-0.5
5,904,761	+				+1.2
5,904,761	+				+0.8
5,904,761	+				+0.5
5,904,761	+				+0.9
5,904,762	-				-0.6
5,904,809	+				+0.5
5,904,810	-				+0.4
5,904,928	+				-0.8
5,904,928	+				-1.1
5,904,929	-				-0.1
5,904,929	-				+0.7
5,904,931	+				+0.8
5,904,932	-				-0.1
5,904,932	-				-0.2
5,904,932	-				+0.9
5,904,932	-				+0.9
5,904,932	-				+0.7
5,904,932	-				-0.2
5,904,932	-				+0.1
5,904,932	-				+1.2
5,904,932	-				-0.7
5,904,932	-				+0.7
5,904,932	-				+0.2
5,904,998	+				+0.5
5,904,998	+				-0.4
5,904,998	+				-0.1
5,904,998	+				-0.9
5,904,998	+				+0.0
5,904,999	-				+0.3
5,904,999	-				-0.5
5,904,999	-				-0.9
5,904,999	-				-0.8
5,904,999	-				+0.2
5,905,207	+				+0.5
5,905,207	+				+0.7
5,905,208	-				-0.3
5,905,252	-				-2.0
5,905,252	-				-1.3
5,905,285	+				-0.2
5,905,285	+				+0.7
5,905,289	+				+1.5
5,905,290	-				+0.7
5,905,290	-				-0.6
5,905,290	-				-0.4
5,905,290	-				-0.1
5,905,290	-				-1.1
5,905,306	-				+1.2
5,905,351	+				-0.1
5,905,570	+		Pf6N2E2_5122	0.10	+0.6
5,905,584	-		Pf6N2E2_5122	0.11	+0.5
5,905,784	+		Pf6N2E2_5122	0.26	+0.4
5,905,785	-		Pf6N2E2_5122	0.26	-0.0
5,905,785	-		Pf6N2E2_5122	0.26	-0.2
5,905,785	-		Pf6N2E2_5122	0.26	-1.3
5,905,894	+		Pf6N2E2_5122	0.34	+2.2
5,905,894	+		Pf6N2E2_5122	0.34	+0.2
5,905,894	+		Pf6N2E2_5122	0.34	+0.1
5,905,895	-		Pf6N2E2_5122	0.34	+0.2
5,905,895	-		Pf6N2E2_5122	0.34	+0.9
5,905,895	-		Pf6N2E2_5122	0.34	+0.3
5,905,895	-		Pf6N2E2_5122	0.34	+0.2
5,906,293	+		Pf6N2E2_5122	0.64	+1.1
5,906,294	-		Pf6N2E2_5122	0.64	+0.1
5,906,294	-		Pf6N2E2_5122	0.64	-0.9
5,906,294	-		Pf6N2E2_5122	0.64	-0.7
5,906,294	-		Pf6N2E2_5122	0.64	-0.7
5,906,774	+				-0.9
5,906,775	-				+0.8
5,906,846	+				-0.2
5,906,846	+				-0.0
5,906,846	+				-0.2
5,906,886	+				-0.7
5,906,886	+				-0.6
5,906,887	-				-0.3
5,906,887	-				+0.8
5,906,996	+		Pf6N2E2_5123	0.14	+0.4
5,907,132	+		Pf6N2E2_5123	0.22	+1.1
5,907,132	+		Pf6N2E2_5123	0.22	+1.0
5,907,132	+		Pf6N2E2_5123	0.22	-0.9
5,907,132	+		Pf6N2E2_5123	0.22	+0.4
5,907,132	+		Pf6N2E2_5123	0.22	+0.2
5,907,132	+		Pf6N2E2_5123	0.22	+0.1
5,907,133	-		Pf6N2E2_5123	0.22	+1.0
5,907,133	-		Pf6N2E2_5123	0.22	-0.2
5,907,313	+		Pf6N2E2_5123	0.34	-0.3
5,907,314	-		Pf6N2E2_5123	0.34	+0.6
5,907,365	+		Pf6N2E2_5123	0.37	-0.0
5,907,365	+		Pf6N2E2_5123	0.37	+1.2
5,907,365	+		Pf6N2E2_5123	0.37	-0.3
5,907,366	-		Pf6N2E2_5123	0.37	+1.8
5,907,366	-		Pf6N2E2_5123	0.37	+0.6
5,907,497	+		Pf6N2E2_5123	0.45	+0.2
5,907,519	+		Pf6N2E2_5123	0.47	+1.4
5,907,519	+		Pf6N2E2_5123	0.47	-1.6
5,907,520	-		Pf6N2E2_5123	0.47	+1.2
5,907,642	+		Pf6N2E2_5123	0.54	+0.2
5,907,642	+		Pf6N2E2_5123	0.54	+1.8
5,907,642	+		Pf6N2E2_5123	0.54	+0.8
5,907,643	-		Pf6N2E2_5123	0.54	+1.1
5,907,674	+		Pf6N2E2_5123	0.56	-0.4
5,907,674	+		Pf6N2E2_5123	0.56	+0.2
5,907,674	+		Pf6N2E2_5123	0.56	-0.0
5,907,675	-		Pf6N2E2_5123	0.56	-0.2
5,907,675	-		Pf6N2E2_5123	0.56	-1.5