Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4044

Experiment: nitrate 0.125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 0.125 M
4,724,443	+				+0.7
4,724,443	+				+0.2
4,724,443	+				-0.0
4,724,443	+				-0.2
4,724,443	+				-1.0
4,724,780	+				-1.4
4,724,781	-				+1.1
4,724,791	+				+0.7
4,724,794	-				-0.3
4,724,812	+				+1.1
4,724,813	-				+0.1
4,724,818	+				-0.4
4,724,819	-				+0.4
4,724,819	-				-1.8
4,724,900	+				+0.2
4,724,900	+				+0.3
4,724,900	+				-0.8
4,724,901	-				-0.2
4,724,901	-				-0.4
4,724,901	-				+0.5
4,724,901	-				-0.7
4,724,904	-				-2.8
4,724,904	-				-0.2
4,724,954	+				+0.1
4,724,955	-				+0.1
4,724,955	-				-0.3
4,724,955	-				-0.1
4,724,955	-				-0.5
4,724,955	-				+0.4
4,724,955	-				+0.4
4,725,241	+		Pf6N2E2_4043	0.77	+0.6
4,725,241	+		Pf6N2E2_4043	0.77	+0.8
4,725,241	+		Pf6N2E2_4043	0.77	-0.9
4,725,241	+		Pf6N2E2_4043	0.77	+0.2
4,725,242	-		Pf6N2E2_4043	0.78	-0.8
4,725,242	-		Pf6N2E2_4043	0.78	+0.8
4,725,242	-		Pf6N2E2_4043	0.78	-0.9
4,725,242	-		Pf6N2E2_4043	0.78	-0.3
4,725,459	+		Pf6N2E2_4044	0.13	-0.4
4,725,460	-		Pf6N2E2_4044	0.13	-1.3
4,725,527	+		Pf6N2E2_4044	0.35	-1.6
4,725,565	+		Pf6N2E2_4044	0.47	-0.5
4,725,565	+		Pf6N2E2_4044	0.47	-0.8
4,725,565	+		Pf6N2E2_4044	0.47	-0.3
4,725,566	-		Pf6N2E2_4044	0.48	-2.2
4,725,656	+		Pf6N2E2_4044	0.77	-3.1
4,725,725	+				-1.1
4,725,725	+				-1.0
4,725,725	+				+0.6
4,725,725	+				+0.8
4,725,725	+				-0.1
4,725,725	+				+0.2
4,725,725	+				-1.8
4,725,726	-				-2.4
4,725,726	-				-0.6
4,725,726	-				+0.0
4,725,726	-				-1.0
4,725,726	-				-0.6
4,725,726	-				-1.6
4,725,726	-				-2.1
4,725,726	-				-0.9
4,725,726	-				-0.5
4,725,726	-				-0.2
4,725,729	+				-0.6
4,725,730	-				+0.2
4,725,730	-				-2.3
4,725,730	-				+0.3
4,725,730	-				+0.1
4,725,730	-				+0.6
4,725,735	+				+1.3
4,725,735	+				+0.1
4,725,735	+				-1.9
4,725,735	+				+0.9
4,725,736	-				+1.1
4,725,736	-				-1.5
4,725,736	-				-0.1
4,725,736	-				-0.2
4,725,736	-				-1.0
4,725,736	-				-1.5
4,725,736	-				-1.5
4,725,761	-				+0.3
4,725,783	+				+0.2
4,725,820	+		Pf6N2E2_4045	0.20	-0.7
4,725,820	+		Pf6N2E2_4045	0.20	-1.7
4,725,820	+		Pf6N2E2_4045	0.20	-0.9
4,725,821	-		Pf6N2E2_4045	0.21	+0.7
4,725,821	-		Pf6N2E2_4045	0.21	+0.6
4,725,821	-		Pf6N2E2_4045	0.21	+0.2
4,725,839	-		Pf6N2E2_4045	0.26	-0.5
4,725,839	-		Pf6N2E2_4045	0.26	-0.9
4,726,354	-		Pf6N2E2_4046	0.14	-0.7
4,726,354	-		Pf6N2E2_4046	0.14	-2.2
4,726,456	+		Pf6N2E2_4046	0.20	+0.6
4,726,457	-		Pf6N2E2_4046	0.20	-1.3
4,726,457	-		Pf6N2E2_4046	0.20	-0.5
4,726,472	+		Pf6N2E2_4046	0.20	-2.6
4,726,491	+		Pf6N2E2_4046	0.21	-0.1
4,726,491	+		Pf6N2E2_4046	0.21	-0.4
4,726,491	+		Pf6N2E2_4046	0.21	-1.3
4,726,492	-		Pf6N2E2_4046	0.21	+0.0
4,726,630	+		Pf6N2E2_4046	0.28	-0.5
4,726,630	+		Pf6N2E2_4046	0.28	-0.3
4,726,630	+		Pf6N2E2_4046	0.28	+0.0
4,726,630	+		Pf6N2E2_4046	0.28	-2.8
4,726,630	+		Pf6N2E2_4046	0.28	-2.3
4,726,630	+		Pf6N2E2_4046	0.28	-2.5
4,726,630	+		Pf6N2E2_4046	0.28	-1.3
4,726,630	+		Pf6N2E2_4046	0.28	-0.6
4,726,631	-		Pf6N2E2_4046	0.28	-0.3
4,726,631	-		Pf6N2E2_4046	0.28	-1.0
4,726,631	-		Pf6N2E2_4046	0.28	+0.2
4,726,631	-		Pf6N2E2_4046	0.28	-2.3
4,726,631	-		Pf6N2E2_4046	0.28	-0.9
4,726,631	-		Pf6N2E2_4046	0.28	-1.3
4,726,631	-		Pf6N2E2_4046	0.28	-0.0
4,726,694	-		Pf6N2E2_4046	0.32	-0.6
4,726,694	-		Pf6N2E2_4046	0.32	-2.1