Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3829

Experiment: nitrate 0.125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 0.125 M
4,463,028	-		Pf6N2E2_3827	0.35	+0.8
4,463,028	-		Pf6N2E2_3827	0.35	-0.1
4,463,142	-		Pf6N2E2_3827	0.61	-0.6
4,463,142	-		Pf6N2E2_3827	0.61	-1.1
4,463,249	+		Pf6N2E2_3827	0.85	-0.9
4,463,249	+		Pf6N2E2_3827	0.85	+0.7
4,463,249	+		Pf6N2E2_3827	0.85	+1.0
4,463,249	+		Pf6N2E2_3827	0.85	+1.0
4,463,249	+		Pf6N2E2_3827	0.85	+0.8
4,463,250	-		Pf6N2E2_3827	0.85	+1.9
4,463,250	-		Pf6N2E2_3827	0.85	-0.3
4,463,250	-		Pf6N2E2_3827	0.85	+1.3
4,463,250	-		Pf6N2E2_3827	0.85	+0.7
4,463,250	-		Pf6N2E2_3827	0.85	+0.3
4,463,250	-		Pf6N2E2_3827	0.85	-1.5
4,463,278	+				+0.6
4,463,278	+				-0.2
4,463,278	+				+0.1
4,463,278	+				-0.9
4,463,278	+				-1.3
4,463,278	+				+0.3
4,463,278	+				-1.2
4,463,279	-				+1.2
4,463,472	+		Pf6N2E2_3828	0.35	-0.2
4,463,472	+		Pf6N2E2_3828	0.35	-0.7
4,463,473	-		Pf6N2E2_3828	0.35	-0.3
4,463,473	-		Pf6N2E2_3828	0.35	+0.4
4,463,547	-		Pf6N2E2_3828	0.51	-0.2
4,463,737	-				+0.2
4,463,737	-				-0.9
4,463,764	+				+0.0
4,463,764	+				+0.7
4,463,764	+				-0.4
4,463,764	+				-0.3
4,463,764	+				-0.1
4,463,765	-				-2.8
4,463,765	-				+1.2
4,463,765	-				+0.9
4,463,765	-				-0.8
4,463,767	-				+0.3
4,463,767	-				-1.5
4,463,888	+				+1.4
4,463,888	+				+0.5
4,463,889	-				+0.2
4,463,889	-				+1.2
4,463,939	+		Pf6N2E2_3829	0.11	-0.5
4,464,299	+		Pf6N2E2_3829	0.85	-0.4
4,464,299	+		Pf6N2E2_3829	0.85	+0.5
4,464,299	+		Pf6N2E2_3829	0.85	-1.6
4,464,299	+		Pf6N2E2_3829	0.85	+0.1
4,464,299	+		Pf6N2E2_3829	0.85	-0.4
4,464,300	-		Pf6N2E2_3829	0.86	-0.3
4,464,300	-		Pf6N2E2_3829	0.86	-1.1
4,464,300	-		Pf6N2E2_3829	0.86	-1.9
4,464,300	-		Pf6N2E2_3829	0.86	-0.5
4,464,300	-		Pf6N2E2_3829	0.86	-0.5
4,464,383	+				-0.3
4,464,384	-				+0.6
4,464,384	-				+0.4
4,464,384	-				+0.1
4,464,384	-				+1.2
4,464,384	-				-1.9
4,464,435	+		Pf6N2E2_3830	0.10	-0.8
4,464,605	+		Pf6N2E2_3830	0.77	-0.8
4,464,605	+		Pf6N2E2_3830	0.77	-0.5
4,464,605	+		Pf6N2E2_3830	0.77	-1.2
4,464,605	+		Pf6N2E2_3830	0.77	-0.9
4,464,606	-		Pf6N2E2_3830	0.77	+1.3
4,464,606	-		Pf6N2E2_3830	0.77	+0.0
4,464,606	-		Pf6N2E2_3830	0.77	-1.5
4,464,623	+		Pf6N2E2_3830	0.84	-0.3
4,464,632	+		Pf6N2E2_3830	0.87	-0.6
4,464,704	-				+0.4
4,464,704	-				-1.9
4,465,042	-				+2.5
4,465,100	-				-0.5
4,465,115	-				-0.4
4,465,115	-				-0.7
4,465,116	+				+0.0
4,465,116	+				-1.6
4,465,116	+				+0.9
4,465,116	+				-1.3
4,465,116	+				+0.0
4,465,116	+				-1.3
4,465,117	-				+1.5
4,465,117	-				-0.4
4,465,117	-				+0.8
4,465,117	-				-0.2
4,465,117	-				+0.4
4,465,117	-				-0.9
4,465,170	+				+0.9
4,465,170	+				-1.6
4,465,176	+				-1.2
4,465,177	-				-0.5
4,465,236	+				+0.0