Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3009

Experiment: nitrate 0.125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 0.125 M
3,497,453	+		Pf6N2E2_3007	0.72	+0.1
3,497,453	+		Pf6N2E2_3007	0.72	+0.1
3,497,454	-		Pf6N2E2_3007	0.72	+0.9
3,497,454	-		Pf6N2E2_3007	0.72	+0.8
3,497,609	+		Pf6N2E2_3007	0.82	-0.1
3,497,664	-		Pf6N2E2_3007	0.86	+1.3
3,497,705	-		Pf6N2E2_3007	0.88	+0.0
3,497,705	-		Pf6N2E2_3007	0.88	+2.3
3,497,746	+				-0.2
3,497,803	+				+0.1
3,497,804	-				-0.2
3,498,005	+				-0.1
3,498,005	+				-0.1
3,498,145	+		Pf6N2E2_3008	0.43	-0.3
3,498,145	+		Pf6N2E2_3008	0.43	+1.3
3,498,145	+		Pf6N2E2_3008	0.43	-0.7
3,498,145	+		Pf6N2E2_3008	0.43	+1.4
3,498,145	+		Pf6N2E2_3008	0.43	+0.2
3,498,145	+		Pf6N2E2_3008	0.43	-0.5
3,498,146	-		Pf6N2E2_3008	0.43	-0.4
3,498,146	-		Pf6N2E2_3008	0.43	+0.7
3,498,146	-		Pf6N2E2_3008	0.43	-0.5
3,498,411	+		Pf6N2E2_3009	0.29	-1.6
3,498,411	+		Pf6N2E2_3009	0.29	+1.1
3,498,412	-		Pf6N2E2_3009	0.29	-0.7
3,498,537	+		Pf6N2E2_3009	0.65	-0.5
3,498,537	+		Pf6N2E2_3009	0.65	+1.2
3,498,538	-		Pf6N2E2_3009	0.65	-2.5
3,498,630	+				-0.4
3,498,630	+				-1.2
3,498,631	-				-1.1
3,498,631	-				+0.8
3,498,631	-				+0.3
3,498,678	-				-0.3
3,498,721	+				+0.5
3,498,722	-				-1.4
3,498,722	-				+1.0
3,498,742	+				+0.4
3,498,743	-				-1.3
3,498,793	+				-0.2
3,498,794	-				+0.1
3,498,794	-				+0.6
3,498,794	-				+0.4
3,498,794	-				-0.3
3,498,910	+		Pf6N2E2_3010	0.12	+1.0
3,499,007	-		Pf6N2E2_3010	0.19	+1.3
3,499,007	-		Pf6N2E2_3010	0.19	+0.2
3,499,007	-		Pf6N2E2_3010	0.19	-0.4
3,499,115	-		Pf6N2E2_3010	0.26	-0.0
3,499,140	+		Pf6N2E2_3010	0.28	+0.2
3,499,141	-		Pf6N2E2_3010	0.28	+0.8
3,499,141	-		Pf6N2E2_3010	0.28	+0.7
3,499,144	+		Pf6N2E2_3010	0.28	+0.2
3,499,144	+		Pf6N2E2_3010	0.28	-0.7
3,499,145	-		Pf6N2E2_3010	0.28	+0.3
3,499,145	-		Pf6N2E2_3010	0.28	-0.4
3,499,145	-		Pf6N2E2_3010	0.28	+1.1
3,499,157	-		Pf6N2E2_3010	0.29	-0.7
3,499,159	+		Pf6N2E2_3010	0.29	-0.2
3,499,159	+		Pf6N2E2_3010	0.29	+0.7
3,499,160	-		Pf6N2E2_3010	0.29	+0.5
3,499,177	+		Pf6N2E2_3010	0.30	+0.2
3,499,178	-		Pf6N2E2_3010	0.30	-0.0
3,499,178	-		Pf6N2E2_3010	0.30	-0.2
3,499,178	-		Pf6N2E2_3010	0.30	+1.1
3,499,178	-		Pf6N2E2_3010	0.30	+0.8
3,499,298	+		Pf6N2E2_3010	0.38	-0.3
3,499,299	-		Pf6N2E2_3010	0.38	-0.3
3,499,299	-		Pf6N2E2_3010	0.38	+0.4
3,499,299	-		Pf6N2E2_3010	0.38	-0.4
3,499,435	+		Pf6N2E2_3010	0.47	-1.5
3,499,435	+		Pf6N2E2_3010	0.47	+1.8
3,499,435	+		Pf6N2E2_3010	0.47	-0.6
3,499,435	+		Pf6N2E2_3010	0.47	-1.2
3,499,436	-		Pf6N2E2_3010	0.47	-0.4
3,499,436	-		Pf6N2E2_3010	0.47	-1.0