Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2354

Experiment: nitrate 0.125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 0.125 M
2,787,413	+		Pf6N2E2_2352	0.26	-0.6
2,787,557	+		Pf6N2E2_2352	0.46	+0.5
2,787,558	-		Pf6N2E2_2352	0.46	-1.7
2,787,635	+		Pf6N2E2_2352	0.56	+0.4
2,787,636	-		Pf6N2E2_2352	0.57	+0.5
2,788,024	+		Pf6N2E2_2353	0.26	+0.7
2,788,024	+		Pf6N2E2_2353	0.26	+0.2
2,788,024	+		Pf6N2E2_2353	0.26	+0.3
2,788,025	-		Pf6N2E2_2353	0.26	-2.2
2,788,025	-		Pf6N2E2_2353	0.26	+0.2
2,788,056	+		Pf6N2E2_2353	0.36	-0.6
2,788,056	+		Pf6N2E2_2353	0.36	-0.8
2,788,056	+		Pf6N2E2_2353	0.36	+1.5
2,788,056	+		Pf6N2E2_2353	0.36	+0.7
2,788,057	-		Pf6N2E2_2353	0.36	+0.1
2,788,057	-		Pf6N2E2_2353	0.36	-0.4
2,788,253	+				-0.2
2,788,253	+				+0.7
2,788,253	+				+0.0
2,788,253	+				+1.2
2,788,253	+				+0.1
2,788,253	+				+0.4
2,788,253	+				-0.9
2,788,254	-				-0.9
2,788,254	-				-0.8
2,788,254	-				+1.4
2,788,388	+		Pf6N2E2_2354	0.28	+0.2
2,788,388	+		Pf6N2E2_2354	0.28	-0.0
2,788,388	+		Pf6N2E2_2354	0.28	-0.9
2,788,388	+		Pf6N2E2_2354	0.28	-1.3
2,788,395	+		Pf6N2E2_2354	0.31	-1.2
2,788,395	+		Pf6N2E2_2354	0.31	-0.6
2,788,396	-		Pf6N2E2_2354	0.31	-0.7
2,788,417	-		Pf6N2E2_2354	0.39	-0.4
2,788,568	-				-0.4
2,788,576	+				-0.8
2,788,576	+				+1.2
2,788,576	+				-0.7
2,788,576	+				-0.3
2,788,576	+				+0.2
2,788,576	+				-0.3
2,788,576	+				+0.1
2,788,577	-				-0.3
2,788,577	-				+0.2
2,788,577	-				+0.2
2,788,577	-				+0.3
2,788,577	-				+0.5
2,788,577	-				-0.8
2,788,577	-				-0.3
2,788,577	-				+0.2
2,788,586	-				+0.1
2,788,586	-				+0.1
2,788,586	-				+0.3
2,788,632	+				+0.7
2,788,632	+				+0.5
2,788,633	-				+0.2
2,788,633	-				-0.3
2,788,704	+		Pf6N2E2_2355	0.11	-0.7
2,788,704	+		Pf6N2E2_2355	0.11	+0.7
2,788,705	-		Pf6N2E2_2355	0.11	+0.2
2,788,740	+		Pf6N2E2_2355	0.14	-0.2
2,788,741	-		Pf6N2E2_2355	0.14	-0.6
2,788,741	-		Pf6N2E2_2355	0.14	+0.0
2,789,178	+		Pf6N2E2_2355	0.52	-0.2
2,789,178	+		Pf6N2E2_2355	0.52	+0.3
2,789,179	-		Pf6N2E2_2355	0.53	+1.0
2,789,179	-		Pf6N2E2_2355	0.53	+1.0
2,789,486	+		Pf6N2E2_2355	0.79	-0.0