Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1174

Experiment: nitrate 0.125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 0.125 M
1,372,971	+		Pf6N2E2_1172	0.85	-0.1
1,373,066	-				+0.3
1,373,066	-				-1.2
1,373,107	-				-1.7
1,373,107	-				+0.6
1,373,129	+				-2.0
1,373,130	-				-0.7
1,373,161	+				+0.3
1,373,228	+				-2.4
1,373,285	-				+0.6
1,373,288	+				+0.0
1,373,472	-		Pf6N2E2_1173	0.32	-0.6
1,373,472	-		Pf6N2E2_1173	0.32	+0.6
1,373,518	+		Pf6N2E2_1173	0.47	+0.6
1,373,519	-		Pf6N2E2_1173	0.47	+1.3
1,373,519	-		Pf6N2E2_1173	0.47	-0.6
1,373,725	+				+0.8
1,373,791	-				+0.4
1,373,965	+				+0.7
1,374,139	+		Pf6N2E2_1174	0.17	+1.5
1,374,208	+		Pf6N2E2_1174	0.23	-0.0
1,374,208	+		Pf6N2E2_1174	0.23	-0.4
1,374,234	+		Pf6N2E2_1174	0.25	-0.9
1,374,337	+		Pf6N2E2_1174	0.35	+0.5
1,374,456	+		Pf6N2E2_1174	0.46	+0.3
1,374,457	-		Pf6N2E2_1174	0.47	+0.5
1,374,469	+		Pf6N2E2_1174	0.48	+2.3
1,374,488	+		Pf6N2E2_1174	0.49	+0.8
1,374,488	+		Pf6N2E2_1174	0.49	+1.1
1,374,595	-		Pf6N2E2_1174	0.60	+0.7
1,374,681	-		Pf6N2E2_1174	0.68	+0.3
1,374,711	-		Pf6N2E2_1174	0.71	-1.5
1,374,711	-		Pf6N2E2_1174	0.71	+1.1
1,374,711	-		Pf6N2E2_1174	0.71	-0.2
1,374,711	-		Pf6N2E2_1174	0.71	-0.7
1,374,772	-		Pf6N2E2_1174	0.76	+0.5
1,374,794	+		Pf6N2E2_1174	0.78	+1.4
1,374,816	+		Pf6N2E2_1174	0.80	-0.7
1,374,817	-		Pf6N2E2_1174	0.81	-2.3
1,374,817	-		Pf6N2E2_1174	0.81	+1.5
1,374,861	+		Pf6N2E2_1174	0.85	+0.6
1,374,862	-		Pf6N2E2_1174	0.85	+0.9
1,374,862	-		Pf6N2E2_1174	0.85	-0.4
1,374,862	-		Pf6N2E2_1174	0.85	-0.1
1,374,946	+				+0.8
1,374,946	+				+1.1
1,374,947	-				-0.8
1,374,996	+				+0.6
1,374,997	-				+0.7
1,374,997	-				-0.8
1,374,997	-				-0.2
1,374,997	-				+0.7
1,375,056	-				-0.5
1,375,108	+				-0.1
1,375,136	+				+0.4
1,375,136	+				-1.6
1,375,136	+				-0.5
1,375,136	+				-0.6
1,375,167	+				+0.6
1,375,207	-				+0.9
1,375,207	-				+0.3
1,375,207	-				+0.8
1,375,281	+				-0.9
1,375,487	+				-0.7
1,375,487	+				+0.0
1,375,487	+				-0.3
1,375,727	+		Pf6N2E2_1175	0.20	+0.4
1,375,727	+		Pf6N2E2_1175	0.20	-0.8
1,375,793	+		Pf6N2E2_1175	0.23	-1.3
1,375,793	+		Pf6N2E2_1175	0.23	-0.3
1,375,793	+		Pf6N2E2_1175	0.23	-0.0
1,375,794	-		Pf6N2E2_1175	0.23	+1.0
1,375,794	-		Pf6N2E2_1175	0.23	-1.0
1,375,794	-		Pf6N2E2_1175	0.23	-0.5
1,375,794	-		Pf6N2E2_1175	0.23	+1.8
1,375,796	+		Pf6N2E2_1175	0.23	-0.6
1,375,848	-		Pf6N2E2_1175	0.25	-0.4
1,375,874	+		Pf6N2E2_1175	0.26	-0.3
1,375,875	-		Pf6N2E2_1175	0.26	+1.3
1,375,932	-		Pf6N2E2_1175	0.29	+0.7
1,375,932	-		Pf6N2E2_1175	0.29	+0.7