Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1087

Experiment: nitrate 0.125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 0.125 M
1,269,860	+		Pf6N2E2_1086	0.87	+0.5
1,269,861	-		Pf6N2E2_1086	0.88	-1.0
1,269,923	+				+0.7
1,270,097	+				+1.7
1,270,098	-				+0.5
1,270,098	-				-3.1
1,270,151	+				+0.3
1,270,186	+				-0.4
1,270,186	+				+0.8
1,270,187	-				+0.7
1,270,187	-				-0.7
1,270,229	+				+0.8
1,270,229	+				+0.3
1,270,229	+				+0.5
1,270,229	+				+0.1
1,270,229	+				+1.7
1,270,229	+				-0.4
1,270,229	+				+1.0
1,270,230	-				+0.6
1,270,352	+				-0.3
1,270,353	-				-0.3
1,270,353	-				+0.1
1,270,353	-				-0.4
1,270,443	-				+0.0
1,270,499	+		Pf6N2E2_1087	0.12	+0.3
1,270,500	-		Pf6N2E2_1087	0.12	-2.5
1,270,500	-		Pf6N2E2_1087	0.12	-1.0
1,270,691	+		Pf6N2E2_1087	0.32	-1.3
1,270,692	-		Pf6N2E2_1087	0.32	-0.5
1,270,692	-		Pf6N2E2_1087	0.32	-1.0
1,270,775	-		Pf6N2E2_1087	0.40	-1.8
1,270,799	+		Pf6N2E2_1087	0.42	-0.3
1,270,799	+		Pf6N2E2_1087	0.42	-1.7
1,270,800	-		Pf6N2E2_1087	0.42	-1.4
1,270,800	-		Pf6N2E2_1087	0.42	-0.3
1,270,807	+		Pf6N2E2_1087	0.43	-0.5
1,270,807	+		Pf6N2E2_1087	0.43	-2.0
1,270,807	+		Pf6N2E2_1087	0.43	-2.7
1,270,807	+		Pf6N2E2_1087	0.43	-1.3
1,270,807	+		Pf6N2E2_1087	0.43	-1.6
1,270,808	-		Pf6N2E2_1087	0.43	-1.8
1,270,808	-		Pf6N2E2_1087	0.43	-0.4
1,270,938	-		Pf6N2E2_1087	0.56	+0.6
1,271,001	+		Pf6N2E2_1087	0.62	+0.1
1,271,001	+		Pf6N2E2_1087	0.62	-0.7
1,271,002	-		Pf6N2E2_1087	0.63	-1.6
1,271,002	-		Pf6N2E2_1087	0.63	-1.0
1,271,002	-		Pf6N2E2_1087	0.63	-0.4
1,271,008	+		Pf6N2E2_1087	0.63	+0.1
1,271,036	+		Pf6N2E2_1087	0.66	+1.0
1,271,037	-		Pf6N2E2_1087	0.66	-1.0
1,271,073	-		Pf6N2E2_1087	0.70	-1.4
1,271,073	-		Pf6N2E2_1087	0.70	-1.3
1,271,095	+		Pf6N2E2_1087	0.72	+0.2
1,271,099	-		Pf6N2E2_1087	0.72	-0.5
1,271,099	-		Pf6N2E2_1087	0.72	+0.1
1,271,099	-		Pf6N2E2_1087	0.72	-1.5
1,271,346	-				-0.6
1,271,489	+				+0.2
1,271,499	+				-0.7
1,271,499	+				-1.9
1,271,500	-				-2.0
1,271,500	-				-0.6
1,271,500	-				-1.0
1,271,626	+				-1.1
1,271,627	-				-0.8
1,271,627	-				-0.1
1,271,736	-				+0.2
1,271,762	+				-0.1
1,271,762	+				+0.3
1,271,762	+				-0.3
1,271,763	-				+1.9
1,271,763	-				-0.1
1,271,763	-				+0.5
1,271,873	+				-0.2
1,271,921	+				-0.2
1,271,921	+				+0.4
1,271,937	+				-0.7
1,271,938	-				-1.5
1,272,026	+		Pf6N2E2_1088	0.10	+1.1
1,272,026	+		Pf6N2E2_1088	0.10	-1.2
1,272,065	+		Pf6N2E2_1088	0.11	-0.9
1,272,065	+		Pf6N2E2_1088	0.11	-0.3
1,272,065	+		Pf6N2E2_1088	0.11	-0.8
1,272,065	+		Pf6N2E2_1088	0.11	+0.1
1,272,066	-		Pf6N2E2_1088	0.11	-0.2
1,272,094	+		Pf6N2E2_1088	0.12	-2.7
1,272,215	-		Pf6N2E2_1088	0.14	-0.0
1,272,225	+		Pf6N2E2_1088	0.14	-1.1
1,272,226	-		Pf6N2E2_1088	0.14	+0.8
1,272,226	-		Pf6N2E2_1088	0.14	-0.7
1,272,342	-		Pf6N2E2_1088	0.17	+1.3