Strain Fitness in Pantoea sp. MT58 around IAI47_13150

Experiment: Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
2,779,113	+		IAI47_13145	0.55	-0.1
2,779,113	+		IAI47_13145	0.55	+0.3
2,779,114	-		IAI47_13145	0.55	+1.5
2,779,187	+		IAI47_13145	0.65	-0.7
2,779,188	-		IAI47_13145	0.65	+0.1
2,779,188	-		IAI47_13145	0.65	-0.7
2,779,188	-		IAI47_13145	0.65	+0.8
2,779,191	+		IAI47_13145	0.65	-1.7
2,779,191	+		IAI47_13145	0.65	-0.5
2,779,191	+		IAI47_13145	0.65	-0.9
2,779,192	-		IAI47_13145	0.65	+0.3
2,779,326	+		IAI47_13145	0.83	+1.5
2,779,327	-		IAI47_13145	0.83	-1.8
2,779,327	-		IAI47_13145	0.83	-1.1
2,779,327	-		IAI47_13145	0.83	-0.7
2,779,331	+		IAI47_13145	0.84	-0.1
2,779,332	-		IAI47_13145	0.84	-1.1
2,779,332	-		IAI47_13145	0.84	-0.9
2,779,375	+		IAI47_13145	0.89	-0.3
2,779,376	-		IAI47_13145	0.89	-1.4
2,779,376	-		IAI47_13145	0.89	+1.8
2,779,376	-		IAI47_13145	0.89	-1.3
2,779,376	-		IAI47_13145	0.89	-0.5
2,779,376	-		IAI47_13145	0.89	-0.2
2,779,376	-		IAI47_13145	0.89	+0.7
2,779,376	-		IAI47_13145	0.89	-2.2
2,779,376	-		IAI47_13145	0.89	-0.5
2,779,467	+				-0.3
2,779,467	+				-0.9
2,779,468	-				+0.1
2,779,493	+				+3.4
2,779,510	-				+0.7
2,779,510	-				-2.0
2,779,510	-				-0.3
2,779,510	-				+1.1
2,779,510	-				-2.0
2,779,510	-				+2.9
2,779,510	-				-0.5
2,779,510	-				+1.5
2,779,518	-				-3.6
2,779,617	+				-2.8
2,779,655	+				-0.4
2,779,655	+				+0.8
2,779,655	+				+2.3
2,779,655	+				+0.6
2,779,655	+				+3.9
2,779,656	-				+0.5
2,779,656	-				+2.1
2,779,656	-				+0.3
2,779,656	-				-2.4
2,779,675	-				-1.3
2,779,675	-				+3.5
2,779,675	-				-1.1
2,779,675	-				-2.2
2,779,675	-				+1.6
2,779,675	-				+2.8
2,779,675	-				+1.0
2,779,675	-				-1.2
2,779,675	-				+1.4
2,779,702	-				-0.7
2,779,702	-				+2.3
2,779,871	+				+1.3
2,779,871	+				-1.7
2,779,872	-				+0.0
2,779,872	-				+2.6
2,779,876	+				-0.7
2,779,876	+				+1.3
2,779,876	+				-0.3
2,779,876	+				+2.3
2,779,876	+				-1.1
2,779,876	+				+2.3
2,779,876	+				+0.7
2,779,876	+				-0.4
2,779,877	-				-1.7
2,779,877	-				+1.3
2,779,877	-				-1.7
2,779,877	-				+1.5
2,779,877	-				+2.1
2,779,877	-				-1.1
2,779,877	-				-0.1
2,779,877	-				+0.7
2,779,877	-				-0.9
2,779,877	-				+3.3
2,779,877	-				-0.3
2,779,877	-				+0.1
2,779,920	+				+4.5
2,779,920	+				+0.2
2,779,921	-				-2.0
2,779,921	-				+2.9
2,779,980	+				-1.5
2,780,007	+				-0.1
2,780,007	+				-0.9
2,780,007	+				+2.1
2,780,008	-				-1.1
2,780,008	-				-0.9
2,780,016	+				-1.1
2,780,016	+				-0.7
2,780,017	-				-1.3
2,780,017	-				-1.6
2,780,017	-				-2.7
2,780,020	+				-1.1
2,780,020	+				+2.5
2,780,021	-				+0.3
2,780,021	-				-0.1
2,780,124	+				-2.4
2,780,124	+				+0.1
2,780,124	+				+2.0
2,780,124	+				-1.1
2,780,124	+				-2.1
2,780,124	+				-2.1
2,780,124	+				-1.6
2,780,124	+				+1.3
2,780,124	+				-0.9
2,780,124	+				+1.3
2,780,124	+				+1.2
2,780,124	+				-0.1
2,780,124	+				+2.3
2,780,124	+				-0.5
2,780,125	-				-1.1
2,780,125	-				+4.6
2,780,125	-				+0.4
2,780,125	-				-0.5
2,780,125	-				-0.5
2,780,125	-				-0.4
2,780,125	-				-0.5
2,780,125	-				+0.6
2,780,125	-				-1.9
2,780,125	-				-1.3
2,780,141	-				-1.2
2,780,191	+		IAI47_13150	0.13	+2.1
2,780,236	+		IAI47_13150	0.16	+1.9
2,780,236	+		IAI47_13150	0.16	-0.9
2,780,236	+		IAI47_13150	0.16	+0.3
2,780,236	+		IAI47_13150	0.16	-2.4
2,780,236	+		IAI47_13150	0.16	-0.1
2,780,236	+		IAI47_13150	0.16	+1.5
2,780,236	+		IAI47_13150	0.16	-1.4
2,780,237	-		IAI47_13150	0.16	-0.1
2,780,237	-		IAI47_13150	0.16	+1.8
2,780,237	-		IAI47_13150	0.16	-1.4
2,780,237	-		IAI47_13150	0.16	-2.0
2,780,237	-		IAI47_13150	0.16	+0.9
2,780,237	-		IAI47_13150	0.16	+2.5
2,780,237	-		IAI47_13150	0.16	-0.6
2,780,237	-		IAI47_13150	0.16	-0.1
2,780,237	-		IAI47_13150	0.16	-2.2
2,780,237	-		IAI47_13150	0.16	+2.2
2,780,237	-		IAI47_13150	0.16	+2.7
2,780,237	-		IAI47_13150	0.16	-0.5
2,780,237	-		IAI47_13150	0.16	+2.0
2,780,237	-		IAI47_13150	0.16	-0.9
2,780,278	+		IAI47_13150	0.19	+1.7
2,780,278	+		IAI47_13150	0.19	-1.7
2,780,279	-		IAI47_13150	0.19	+2.1
2,780,279	-		IAI47_13150	0.19	+1.4
2,780,279	-		IAI47_13150	0.19	-2.0
2,780,279	-		IAI47_13150	0.19	+1.3
2,780,279	-		IAI47_13150	0.19	-2.1
2,780,281	+		IAI47_13150	0.19	-2.6
2,780,281	+		IAI47_13150	0.19	+0.3
2,780,281	+		IAI47_13150	0.19	+0.7
2,780,281	+		IAI47_13150	0.19	+0.0
2,780,281	+		IAI47_13150	0.19	+1.5
2,780,281	+		IAI47_13150	0.19	+1.0
2,780,282	-		IAI47_13150	0.19	+3.1
2,780,282	-		IAI47_13150	0.19	+2.3
2,780,282	-		IAI47_13150	0.19	-2.3
2,780,282	-		IAI47_13150	0.19	+2.0
2,780,373	-		IAI47_13150	0.25	+1.3
2,780,373	-		IAI47_13150	0.25	+0.5
2,780,373	-		IAI47_13150	0.25	-1.9
2,780,373	-		IAI47_13150	0.25	+1.9
2,780,415	+		IAI47_13150	0.27	-1.6
2,780,415	+		IAI47_13150	0.27	-0.3
2,780,415	+		IAI47_13150	0.27	+1.3
2,780,416	-		IAI47_13150	0.27	-2.1
2,780,416	-		IAI47_13150	0.27	-0.7
2,780,416	-		IAI47_13150	0.27	+1.9
2,780,416	-		IAI47_13150	0.27	-0.5
2,780,418	+		IAI47_13150	0.27	+3.5
2,780,446	+		IAI47_13150	0.29	+1.8
2,780,446	+		IAI47_13150	0.29	+0.3
2,780,446	+		IAI47_13150	0.29	-1.7
2,780,446	+		IAI47_13150	0.29	-2.5
2,780,447	-		IAI47_13150	0.29	+1.3
2,780,447	-		IAI47_13150	0.29	-1.1
2,780,447	-		IAI47_13150	0.29	-1.2
2,780,447	-		IAI47_13150	0.29	+1.9
2,780,447	-		IAI47_13150	0.29	+0.5
2,780,447	-		IAI47_13150	0.29	-1.8
2,780,447	-		IAI47_13150	0.29	-1.2
2,780,458	+		IAI47_13150	0.30	-2.4
2,780,458	+		IAI47_13150	0.30	+1.9
2,780,458	+		IAI47_13150	0.30	+1.7
2,780,459	-		IAI47_13150	0.30	+1.9
2,780,467	+		IAI47_13150	0.30	+2.3
2,780,468	-		IAI47_13150	0.31	-2.3
2,780,468	-		IAI47_13150	0.31	-0.6
2,780,503	+		IAI47_13150	0.33	-0.3
2,780,503	+		IAI47_13150	0.33	-0.9
2,780,504	-		IAI47_13150	0.33	-0.1
2,780,504	-		IAI47_13150	0.33	-2.0
2,780,504	-		IAI47_13150	0.33	-2.2
2,780,504	-		IAI47_13150	0.33	+2.1
2,780,504	-		IAI47_13150	0.33	+1.3
2,780,504	-		IAI47_13150	0.33	-0.3
2,780,509	+		IAI47_13150	0.33	+2.8
2,780,561	+		IAI47_13150	0.36	-0.3
2,780,600	+		IAI47_13150	0.39	-2.6
2,780,609	+		IAI47_13150	0.39	+0.7
2,780,610	-		IAI47_13150	0.39	+2.2
2,780,610	-		IAI47_13150	0.39	-1.1
2,780,623	+		IAI47_13150	0.40	+0.7
2,780,654	+		IAI47_13150	0.42	-0.9
2,780,657	-		IAI47_13150	0.42	+3.3
2,780,743	+		IAI47_13150	0.48	-0.3
2,780,753	-		IAI47_13150	0.48	+2.3
2,780,753	-		IAI47_13150	0.48	-0.3
2,780,753	-		IAI47_13150	0.48	+0.3
2,780,759	-		IAI47_13150	0.49	-0.9
2,780,780	+		IAI47_13150	0.50	-1.4
2,780,780	+		IAI47_13150	0.50	-2.0
2,780,780	+		IAI47_13150	0.50	+3.3
2,780,781	-		IAI47_13150	0.50	+0.3
2,780,781	-		IAI47_13150	0.50	-1.3
2,780,781	-		IAI47_13150	0.50	+1.9
2,780,781	-		IAI47_13150	0.50	-1.2
2,780,813	-		IAI47_13150	0.52	-1.3
2,780,854	+		IAI47_13150	0.55	+1.8
2,780,854	+		IAI47_13150	0.55	-0.9
2,780,854	+		IAI47_13150	0.55	-1.3
2,780,854	+		IAI47_13150	0.55	+1.8
2,780,855	-		IAI47_13150	0.55	+1.3
2,780,855	-		IAI47_13150	0.55	+1.4
2,780,855	-		IAI47_13150	0.55	-1.0
2,780,855	-		IAI47_13150	0.55	+0.7
2,780,855	-		IAI47_13150	0.55	+2.3
2,780,855	-		IAI47_13150	0.55	-2.3
2,780,855	-		IAI47_13150	0.55	+0.9
2,780,856	+		IAI47_13150	0.55	+1.6
2,780,856	+		IAI47_13150	0.55	-2.1
2,780,856	+		IAI47_13150	0.55	+2.6
2,780,856	+		IAI47_13150	0.55	+2.1
2,780,856	+		IAI47_13150	0.55	+3.4
2,780,856	+		IAI47_13150	0.55	+0.8
2,780,856	+		IAI47_13150	0.55	-0.7
2,780,856	+		IAI47_13150	0.55	-1.1
2,780,856	+		IAI47_13150	0.55	-1.6
2,780,856	+		IAI47_13150	0.55	-0.9
2,780,857	-		IAI47_13150	0.55	+1.1
2,780,857	-		IAI47_13150	0.55	+0.0
2,780,857	-		IAI47_13150	0.55	+3.2
2,780,857	-		IAI47_13150	0.55	+0.3
2,780,857	-		IAI47_13150	0.55	-0.5
2,780,857	-		IAI47_13150	0.55	-1.6
2,780,857	-		IAI47_13150	0.55	+0.7
2,780,865	+		IAI47_13150	0.55	-0.5
2,780,865	+		IAI47_13150	0.55	-2.6
2,780,865	+		IAI47_13150	0.55	-1.4
2,780,869	+		IAI47_13150	0.56	+2.3
2,780,870	-		IAI47_13150	0.56	+1.8
2,780,878	-		IAI47_13150	0.56	+0.3
2,780,895	+		IAI47_13150	0.57	+2.8
2,780,926	+		IAI47_13150	0.59	-1.1
2,780,926	+		IAI47_13150	0.59	-2.4
2,780,927	-		IAI47_13150	0.59	+1.4
2,780,927	-		IAI47_13150	0.59	-1.8
2,780,927	-		IAI47_13150	0.59	-0.5
2,780,927	-		IAI47_13150	0.59	+0.7
2,780,927	-		IAI47_13150	0.59	-1.6
2,780,927	-		IAI47_13150	0.59	-1.3
2,780,927	-		IAI47_13150	0.59	-1.5
2,780,929	+		IAI47_13150	0.59	-0.3
2,780,930	-		IAI47_13150	0.60	+1.7
2,780,930	-		IAI47_13150	0.60	-1.6
2,780,956	+		IAI47_13150	0.61	+2.3
2,780,956	+		IAI47_13150	0.61	+3.3
2,780,957	-		IAI47_13150	0.61	-1.9
2,780,957	-		IAI47_13150	0.61	-2.1
2,780,957	-		IAI47_13150	0.61	-0.7
2,780,957	-		IAI47_13150	0.61	-0.5
2,781,042	-		IAI47_13150	0.67	-2.5
2,781,094	+		IAI47_13150	0.70	+0.1
2,781,094	+		IAI47_13150	0.70	-1.9
2,781,095	-		IAI47_13150	0.70	-2.6
2,781,095	-		IAI47_13150	0.70	+2.2
2,781,126	+		IAI47_13150	0.72	+0.7
2,781,161	+		IAI47_13150	0.74	+3.5
2,781,161	+		IAI47_13150	0.74	-1.6
2,781,187	+		IAI47_13150	0.76	+0.3
2,781,188	-		IAI47_13150	0.76	+2.1
2,781,188	-		IAI47_13150	0.76	+1.7
2,781,188	-		IAI47_13150	0.76	+3.4
2,781,188	-		IAI47_13150	0.76	+0.3
2,781,189	+		IAI47_13150	0.76	+3.2
2,781,189	+		IAI47_13150	0.76	-1.4
2,781,190	-		IAI47_13150	0.76	-1.8
2,781,190	-		IAI47_13150	0.76	+0.0
2,781,190	-		IAI47_13150	0.76	-1.4
2,781,208	-		IAI47_13150	0.77	+2.3
2,781,232	+		IAI47_13150	0.78	+0.8
2,781,232	+		IAI47_13150	0.78	+0.2
2,781,232	+		IAI47_13150	0.78	+1.4
2,781,232	+		IAI47_13150	0.78	+2.7
2,781,232	+		IAI47_13150	0.78	-0.7
2,781,232	+		IAI47_13150	0.78	-1.7
2,781,232	+		IAI47_13150	0.78	-2.2
2,781,233	-		IAI47_13150	0.79	+0.3
2,781,233	-		IAI47_13150	0.79	-1.3
2,781,233	-		IAI47_13150	0.79	+3.6
2,781,233	-		IAI47_13150	0.79	+2.7
2,781,233	-		IAI47_13150	0.79	+1.3
2,781,234	+		IAI47_13150	0.79	+2.4
2,781,235	-		IAI47_13150	0.79	-1.9
2,781,235	-		IAI47_13150	0.79	-0.1
2,781,235	-		IAI47_13150	0.79	-0.2
2,781,235	-		IAI47_13150	0.79	-0.9
2,781,267	+		IAI47_13150	0.81	-2.1
2,781,267	+		IAI47_13150	0.81	-0.7
2,781,267	+		IAI47_13150	0.81	+0.7
2,781,271	+		IAI47_13150	0.81	-1.1
2,781,271	+		IAI47_13150	0.81	-1.8
2,781,271	+		IAI47_13150	0.81	+2.6
2,781,272	-		IAI47_13150	0.81	-1.3
2,781,272	-		IAI47_13150	0.81	-0.9
2,781,272	-		IAI47_13150	0.81	+0.3
2,781,273	-		IAI47_13150	0.81	-0.9
2,781,299	+		IAI47_13150	0.83	+0.1
2,781,300	-		IAI47_13150	0.83	-1.3
2,781,320	+		IAI47_13150	0.84	+0.2
2,781,320	+		IAI47_13150	0.84	-1.1
2,781,320	+		IAI47_13150	0.84	-0.1
2,781,321	-		IAI47_13150	0.84	-2.1
2,781,321	-		IAI47_13150	0.84	+0.0
2,781,321	-		IAI47_13150	0.84	+2.0
2,781,321	-		IAI47_13150	0.84	+1.9
2,781,321	-		IAI47_13150	0.84	-2.8
2,781,321	-		IAI47_13150	0.84	+3.6
2,781,321	-		IAI47_13150	0.84	-1.9
2,781,321	-		IAI47_13150	0.84	-1.4
2,781,321	-		IAI47_13150	0.84	+1.2
2,781,332	+		IAI47_13150	0.85	-0.5
2,781,333	-		IAI47_13150	0.85	-3.3
2,781,374	-		IAI47_13150	0.87	+3.5
2,781,380	-		IAI47_13150	0.88	+2.9
2,781,388	+		IAI47_13150	0.88	+0.1
2,781,389	-		IAI47_13150	0.88	+1.3
2,781,389	-		IAI47_13150	0.88	-0.3
2,781,396	+		IAI47_13150	0.89	-3.3
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