Strain Fitness in Pantoea sp. MT58 around IAI47_11650

Experiment: Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
2,467,755	+				-1.6
2,467,755	+				-1.8
2,467,755	+				+2.2
2,467,755	+				+2.3
2,467,756	-				-0.8
2,467,756	-				-1.4
2,467,756	-				+0.8
2,467,756	-				+2.9
2,467,833	+		IAI47_11645	0.18	+0.2
2,467,833	+		IAI47_11645	0.18	-1.9
2,467,833	+		IAI47_11645	0.18	-2.0
2,467,833	+		IAI47_11645	0.18	-0.8
2,467,833	+		IAI47_11645	0.18	-1.8
2,467,833	+		IAI47_11645	0.18	-0.1
2,467,833	+		IAI47_11645	0.18	+2.0
2,467,833	+		IAI47_11645	0.18	+1.2
2,467,834	-		IAI47_11645	0.18	-3.1
2,467,834	-		IAI47_11645	0.18	+0.2
2,467,834	-		IAI47_11645	0.18	+4.0
2,467,834	-		IAI47_11645	0.18	-1.6
2,467,834	-		IAI47_11645	0.18	-1.9
2,467,838	+		IAI47_11645	0.18	-1.8
2,467,865	+		IAI47_11645	0.21	+3.0
2,467,870	+		IAI47_11645	0.21	-0.4
2,467,871	-		IAI47_11645	0.22	+1.9
2,467,890	-		IAI47_11645	0.23	-0.6
2,467,890	-		IAI47_11645	0.23	-0.6
2,467,890	-		IAI47_11645	0.23	+2.4
2,467,917	-		IAI47_11645	0.26	-1.3
2,467,937	+		IAI47_11645	0.28	+2.6
2,467,944	-		IAI47_11645	0.29	-0.8
2,467,947	+		IAI47_11645	0.29	+1.5
2,467,947	+		IAI47_11645	0.29	-0.6
2,467,947	+		IAI47_11645	0.29	+1.6
2,467,947	+		IAI47_11645	0.29	+2.2
2,467,948	-		IAI47_11645	0.29	+1.0
2,467,955	+		IAI47_11645	0.30	-0.6
2,467,955	+		IAI47_11645	0.30	+2.0
2,467,955	+		IAI47_11645	0.30	+0.1
2,467,955	+		IAI47_11645	0.30	+2.6
2,467,956	-		IAI47_11645	0.30	-1.5
2,467,956	-		IAI47_11645	0.30	+2.9
2,468,008	+		IAI47_11645	0.36	-1.9
2,468,009	-		IAI47_11645	0.36	-1.3
2,468,012	+		IAI47_11645	0.36	+2.7
2,468,012	+		IAI47_11645	0.36	-0.8
2,468,012	+		IAI47_11645	0.36	+0.8
2,468,012	+		IAI47_11645	0.36	+3.1
2,468,012	+		IAI47_11645	0.36	-0.8
2,468,012	+		IAI47_11645	0.36	+2.2
2,468,012	+		IAI47_11645	0.36	+1.0
2,468,013	-		IAI47_11645	0.36	-1.4
2,468,013	-		IAI47_11645	0.36	+4.0
2,468,013	-		IAI47_11645	0.36	+2.7
2,468,013	-		IAI47_11645	0.36	-0.4
2,468,013	-		IAI47_11645	0.36	+0.2
2,468,013	-		IAI47_11645	0.36	-2.7
2,468,013	-		IAI47_11645	0.36	-2.0
2,468,013	-		IAI47_11645	0.36	+1.9
2,468,013	-		IAI47_11645	0.36	-0.4
2,468,016	+		IAI47_11645	0.36	-0.1
2,468,016	+		IAI47_11645	0.36	+1.7
2,468,016	+		IAI47_11645	0.36	-0.1
2,468,017	-		IAI47_11645	0.37	+0.8
2,468,017	-		IAI47_11645	0.37	-0.4
2,468,025	+		IAI47_11645	0.37	+1.2
2,468,033	+		IAI47_11645	0.38	-1.1
2,468,033	+		IAI47_11645	0.38	+2.8
2,468,033	+		IAI47_11645	0.38	+1.6
2,468,033	+		IAI47_11645	0.38	-0.8
2,468,033	+		IAI47_11645	0.38	+2.3
2,468,033	+		IAI47_11645	0.38	+1.2
2,468,034	-		IAI47_11645	0.38	+0.3
2,468,034	-		IAI47_11645	0.38	+0.2
2,468,034	-		IAI47_11645	0.38	-1.5
2,468,034	-		IAI47_11645	0.38	+1.4
2,468,034	-		IAI47_11645	0.38	+1.3
2,468,034	-		IAI47_11645	0.38	-0.1
2,468,034	-		IAI47_11645	0.38	-1.6
2,468,034	-		IAI47_11645	0.38	+1.2
2,468,071	+		IAI47_11645	0.42	-2.0
2,468,072	-		IAI47_11645	0.42	+2.2
2,468,091	-		IAI47_11645	0.44	-1.4
2,468,103	-		IAI47_11645	0.45	+2.2
2,468,103	-		IAI47_11645	0.45	-0.4
2,468,103	-		IAI47_11645	0.45	+1.4
2,468,112	+		IAI47_11645	0.46	-0.2
2,468,113	-		IAI47_11645	0.46	-1.4
2,468,229	+		IAI47_11645	0.58	-1.3
2,468,230	-		IAI47_11645	0.58	-2.6
2,468,230	-		IAI47_11645	0.58	+3.8
2,468,260	+		IAI47_11645	0.62	-1.6
2,468,261	-		IAI47_11645	0.62	-1.3
2,468,282	-		IAI47_11645	0.64	+0.7
2,468,306	+		IAI47_11645	0.66	+3.7
2,468,306	+		IAI47_11645	0.66	+2.2
2,468,306	+		IAI47_11645	0.66	+2.0
2,468,306	+		IAI47_11645	0.66	+1.7
2,468,306	+		IAI47_11645	0.66	-2.4
2,468,306	+		IAI47_11645	0.66	+0.7
2,468,307	-		IAI47_11645	0.66	+1.9
2,468,307	-		IAI47_11645	0.66	+1.3
2,468,307	-		IAI47_11645	0.66	-0.1
2,468,307	-		IAI47_11645	0.66	+2.5
2,468,307	-		IAI47_11645	0.66	+0.2
2,468,307	-		IAI47_11645	0.66	+2.1
2,468,307	-		IAI47_11645	0.66	-2.5
2,468,307	-		IAI47_11645	0.66	-2.6
2,468,307	-		IAI47_11645	0.66	+0.6
2,468,312	-		IAI47_11645	0.67	-0.1
2,468,329	+		IAI47_11645	0.69	-1.0
2,468,339	-		IAI47_11645	0.70	-0.8
2,468,350	+		IAI47_11645	0.71	-0.8
2,468,351	-		IAI47_11645	0.71	+2.2
2,468,351	-		IAI47_11645	0.71	+0.8
2,468,351	-		IAI47_11645	0.71	-0.8
2,468,351	-		IAI47_11645	0.71	-2.2
2,468,358	+		IAI47_11645	0.72	-1.4
2,468,358	+		IAI47_11645	0.72	+2.1
2,468,358	+		IAI47_11645	0.72	+0.8
2,468,358	+		IAI47_11645	0.72	-0.0
2,468,358	+		IAI47_11645	0.72	+2.1
2,468,358	+		IAI47_11645	0.72	-0.6
2,468,359	-		IAI47_11645	0.72	+0.7
2,468,359	-		IAI47_11645	0.72	-1.7
2,468,359	-		IAI47_11645	0.72	-2.4
2,468,359	-		IAI47_11645	0.72	-1.6
2,468,407	+		IAI47_11645	0.77	+3.5
2,468,407	+		IAI47_11645	0.77	-0.4
2,468,407	+		IAI47_11645	0.77	-1.4
2,468,407	+		IAI47_11645	0.77	-1.0
2,468,408	-		IAI47_11645	0.77	+0.8
2,468,408	-		IAI47_11645	0.77	+1.7
2,468,408	-		IAI47_11645	0.77	+2.8
2,468,410	+		IAI47_11645	0.77	-0.1
2,468,411	-		IAI47_11645	0.77	-1.6
2,468,425	+		IAI47_11645	0.79	-0.4
2,468,465	-		IAI47_11645	0.83	-0.1
2,468,486	+		IAI47_11645	0.85	-2.7
2,468,504	-		IAI47_11645	0.87	+4.5
2,468,526	-		IAI47_11645	0.89	+0.2
2,468,554	+				+1.0
2,468,554	+				-1.3
2,468,554	+				+0.2
2,468,555	-				-0.0
2,468,555	-				-1.0
2,468,555	-				+0.1
2,468,555	-				-0.1
2,468,555	-				-0.8
2,468,555	-				-0.4
2,468,569	-				-1.3
2,468,671	-				-0.8
2,468,671	-				-0.1
2,468,679	+				+2.3
2,468,679	+				+1.0
2,468,685	+				+2.5
2,468,685	+				+1.0
2,468,686	-				-1.1
2,468,686	-				-1.0
2,468,752	-				+0.8
2,468,829	+		IAI47_11650	0.16	+0.6
2,468,830	-		IAI47_11650	0.17	+0.9
2,468,862	+		IAI47_11650	0.23	-2.3
2,468,862	+		IAI47_11650	0.23	+1.3
2,468,863	-		IAI47_11650	0.23	-0.0
2,468,863	-		IAI47_11650	0.23	-1.3
2,468,878	+		IAI47_11650	0.27	+1.9
2,468,878	+		IAI47_11650	0.27	+1.7
2,468,879	-		IAI47_11650	0.27	+1.9
2,468,879	-		IAI47_11650	0.27	+1.1
2,468,879	-		IAI47_11650	0.27	-0.4
2,468,901	+		IAI47_11650	0.31	-0.1
2,468,901	+		IAI47_11650	0.31	+1.8
2,468,902	-		IAI47_11650	0.31	+0.6
2,468,902	-		IAI47_11650	0.31	+0.1
2,468,946	+		IAI47_11650	0.41	+0.2
2,468,946	+		IAI47_11650	0.41	-0.4
2,468,947	-		IAI47_11650	0.41	+1.9
2,468,947	-		IAI47_11650	0.41	+1.8
2,468,947	-		IAI47_11650	0.41	-2.1
2,468,972	-		IAI47_11650	0.46	-0.6
2,468,977	+		IAI47_11650	0.47	+5.0
2,468,977	+		IAI47_11650	0.47	+2.0
2,468,977	+		IAI47_11650	0.47	+0.3
2,468,977	+		IAI47_11650	0.47	-1.5
2,468,977	+		IAI47_11650	0.47	-1.6
2,468,978	-		IAI47_11650	0.47	+1.2
2,468,978	-		IAI47_11650	0.47	+2.9
2,468,978	-		IAI47_11650	0.47	+2.5
2,468,992	+		IAI47_11650	0.50	-1.7
2,469,004	+		IAI47_11650	0.53	+3.1
2,469,034	+		IAI47_11650	0.59	+2.9
2,469,035	-		IAI47_11650	0.59	-2.0
2,469,035	-		IAI47_11650	0.59	-1.0
2,469,035	-		IAI47_11650	0.59	-1.6
2,469,035	-		IAI47_11650	0.59	+1.5
2,469,073	+		IAI47_11650	0.67	-2.0
2,469,074	-		IAI47_11650	0.67	+1.7
2,469,074	-		IAI47_11650	0.67	-2.1
2,469,079	+		IAI47_11650	0.68	+3.1
2,469,080	-		IAI47_11650	0.68	-1.1
2,469,085	+		IAI47_11650	0.69	+2.4
2,469,151	+		IAI47_11650	0.83	-0.6
2,469,151	+		IAI47_11650	0.83	-2.2
2,469,151	+		IAI47_11650	0.83	+1.9
2,469,151	+		IAI47_11650	0.83	-1.6
2,469,152	-		IAI47_11650	0.83	+1.9
2,469,152	-		IAI47_11650	0.83	+2.2
2,469,152	-		IAI47_11650	0.83	+3.3
2,469,152	-		IAI47_11650	0.83	+2.2
2,469,154	+		IAI47_11650	0.84	-0.6
2,469,197	-				+1.2
2,469,214	+				+2.0
2,469,215	-				-0.1
2,469,221	-				-2.6
2,469,221	-				-2.7
2,469,226	+				-0.1
2,469,407	+				-1.7
2,469,407	+				-1.0
2,469,407	+				+0.9
2,469,409	+				+0.3
2,469,410	-				+0.5
2,469,487	+				-0.8
2,469,493	-				-0.6
2,469,568	+		IAI47_11655	0.45	-0.8
2,469,655	+		IAI47_11655	0.86	+1.8
2,469,656	-		IAI47_11655	0.86	-2.5
2,469,662	+		IAI47_11655	0.89	+5.2
2,469,662	+		IAI47_11655	0.89	+1.4
2,469,663	-				+2.2
2,469,780	-				+0.7
2,469,780	-				+1.7
2,469,786	+				+1.7
2,469,787	-				-0.8
2,469,787	-				+0.2
2,469,811	-				+2.0
2,469,881	+				-1.7
2,469,882	-				-0.3
2,469,885	-				+1.1
2,469,966	+		IAI47_11660	0.13	+1.9
2,469,986	+		IAI47_11660	0.14	+2.4
2,469,986	+		IAI47_11660	0.14	-0.0
2,469,986	+		IAI47_11660	0.14	-2.5
2,469,986	+		IAI47_11660	0.14	+1.2
2,469,986	+		IAI47_11660	0.14	+0.7
2,469,986	+		IAI47_11660	0.14	-0.1
2,469,986	+		IAI47_11660	0.14	+1.0
2,469,986	+		IAI47_11660	0.14	+2.8
2,469,987	-		IAI47_11660	0.14	+1.5
2,469,987	-		IAI47_11660	0.14	+3.3
2,469,987	-		IAI47_11660	0.14	+0.8
2,469,987	-		IAI47_11660	0.14	-1.1
2,470,006	+		IAI47_11660	0.15	+2.7
2,470,006	+		IAI47_11660	0.15	-1.3
2,470,073	+		IAI47_11660	0.20	-0.4
2,470,074	-		IAI47_11660	0.20	-0.8
2,470,074	-		IAI47_11660	0.20	+1.1
2,470,074	-		IAI47_11660	0.20	+2.1
2,470,103	+		IAI47_11660	0.22	-1.0
2,470,155	-		IAI47_11660	0.25	-3.4
2,470,189	-		IAI47_11660	0.27	-1.0
2,470,231	-		IAI47_11660	0.30	+0.7
2,470,231	-		IAI47_11660	0.30	-1.8