Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_4123

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
4,279,307	+		Ga0059261_4121	0.77	-0.2
4,279,307	+		Ga0059261_4121	0.77	-1.0
4,279,307	+		Ga0059261_4121	0.77	-1.9
4,279,308	-		Ga0059261_4121	0.77	-0.1
4,279,308	-		Ga0059261_4121	0.77	+0.1
4,279,308	-		Ga0059261_4121	0.77	-3.2
4,279,308	-		Ga0059261_4121	0.77	-0.9
4,279,308	-		Ga0059261_4121	0.77	+1.1
4,279,358	+		Ga0059261_4121	0.80	+0.4
4,279,358	+		Ga0059261_4121	0.80	+0.8
4,279,358	+		Ga0059261_4121	0.80	-1.3
4,279,359	-		Ga0059261_4121	0.80	+0.5
4,279,388	+		Ga0059261_4121	0.82	-0.2
4,279,389	-		Ga0059261_4121	0.82	-2.0
4,279,488	+		Ga0059261_4121	0.87	-1.4
4,279,488	+		Ga0059261_4121	0.87	-1.0
4,279,488	+		Ga0059261_4121	0.87	+0.1
4,279,488	+		Ga0059261_4121	0.87	-1.3
4,279,489	-		Ga0059261_4121	0.87	-0.1
4,279,489	-		Ga0059261_4121	0.87	+0.6
4,279,489	-		Ga0059261_4121	0.87	-0.1
4,279,497	-		Ga0059261_4121	0.88	-0.9
4,279,497	-		Ga0059261_4121	0.88	-0.2
4,279,497	-		Ga0059261_4121	0.88	-0.8
4,279,497	-		Ga0059261_4121	0.88	-1.5
4,279,758	-				+0.7
4,280,084	+		Ga0059261_4122	0.71	-0.4
4,280,085	-		Ga0059261_4122	0.71	-0.9
4,280,085	-		Ga0059261_4122	0.71	-1.0
4,280,193	-				-1.5
4,280,193	-				-1.4
4,280,193	-				-0.1
4,280,274	+				-1.3
4,280,274	+				-0.8
4,280,274	+				-1.4
4,280,274	+				-0.8
4,280,274	+				-0.0
4,280,274	+				-1.1
4,280,274	+				+2.4
4,280,274	+				-1.7
4,280,274	+				-0.3
4,280,274	+				-1.0
4,280,274	+				+1.6
4,280,274	+				+0.5
4,280,274	+				-1.9
4,280,274	+				-0.2
4,280,275	-				-0.5
4,280,275	-				+1.4
4,280,275	-				+1.2
4,280,275	-				-0.1
4,280,275	-				-1.0
4,280,275	-				-1.0
4,280,275	-				+1.5
4,280,275	-				-0.4
4,280,275	-				-1.0
4,280,275	-				+1.4
4,280,275	-				+1.2
4,280,275	-				-1.5
4,280,275	-				+1.2
4,280,275	-				+0.2
4,280,275	-				+1.5
4,280,275	-				-0.0
4,280,326	+				-1.5
4,280,326	+				+1.3
4,280,326	+				-1.8
4,280,326	+				+1.5
4,280,327	-				-0.8
4,280,371	+				-0.4
4,280,371	+				-0.8
4,280,371	+				+0.1
4,280,371	+				-2.0
4,280,371	+				-0.8
4,280,372	-				-1.9
4,280,375	+				-1.7
4,280,375	+				-0.2
4,280,375	+				+0.5
4,280,375	+				+0.6
4,280,375	+				-0.4
4,280,376	-				-0.1
4,280,376	-				+1.8
4,280,395	+				-0.6
4,280,395	+				-1.0
4,280,395	+				+0.0
4,280,419	+				-0.4
4,280,419	+				-0.5
4,280,419	+				+1.9
4,280,419	+				+0.2
4,280,419	+				+0.4
4,280,420	-				+2.0
4,280,420	-				-0.2
4,280,420	-				+1.4
4,280,420	-				-1.4
4,280,420	-				+0.7
4,280,420	-				-0.5
4,280,420	-				+2.1
4,280,420	-				+1.3
4,280,436	+		Ga0059261_4123	0.11	+1.0
4,280,436	+		Ga0059261_4123	0.11	+3.7
4,280,436	+		Ga0059261_4123	0.11	+0.6
4,280,436	+		Ga0059261_4123	0.11	-0.5
4,280,437	-		Ga0059261_4123	0.11	+0.0
4,280,437	-		Ga0059261_4123	0.11	+1.0
4,280,437	-		Ga0059261_4123	0.11	-1.3
4,280,896	+		Ga0059261_4123	0.35	-0.2
4,280,897	-		Ga0059261_4123	0.35	+0.4
4,280,897	-		Ga0059261_4123	0.35	+1.5
4,280,897	-		Ga0059261_4123	0.35	+3.0
4,280,932	+		Ga0059261_4123	0.37	-1.9
4,280,932	+		Ga0059261_4123	0.37	-0.2
4,280,933	-		Ga0059261_4123	0.37	+1.2
4,280,933	-		Ga0059261_4123	0.37	-0.5
4,280,933	-		Ga0059261_4123	0.37	-0.5
4,280,933	-				+2.0
4,280,933	-		Ga0059261_4123	0.37	+0.4
4,280,933	-		Ga0059261_4123	0.37	+1.2
4,280,933	-		Ga0059261_4123	0.37	-0.1
4,281,277	+		Ga0059261_4123	0.55	-0.7
4,281,277	+		Ga0059261_4123	0.55	+0.0
4,281,277	+		Ga0059261_4123	0.55	+0.2
4,281,278	-		Ga0059261_4123	0.55	+0.3
4,281,278	-		Ga0059261_4123	0.55	-0.0
4,281,278	-		Ga0059261_4123	0.55	-1.9
4,281,278	-		Ga0059261_4123	0.55	+0.7
4,281,278	-		Ga0059261_4123	0.55	-1.2
4,281,283	+		Ga0059261_4123	0.56	+0.1
4,281,283	+		Ga0059261_4123	0.56	-2.1
4,281,283	+		Ga0059261_4123	0.56	+0.2
4,281,283	+		Ga0059261_4123	0.56	+0.6
4,281,283	+		Ga0059261_4123	0.56	+2.2
4,281,283	+				+2.0
4,281,283	+		Ga0059261_4123	0.56	-0.4
4,281,283	+		Ga0059261_4123	0.56	+0.0
4,281,283	+		Ga0059261_4123	0.56	-0.3
4,281,284	-		Ga0059261_4123	0.56	+0.8
4,281,284	-		Ga0059261_4123	0.56	+1.5
4,281,284	-		Ga0059261_4123	0.56	+0.6
4,281,284	-		Ga0059261_4123	0.56	+0.4
4,281,284	-		Ga0059261_4123	0.56	+0.4
4,281,358	+		Ga0059261_4123	0.60	+1.2
4,281,358	+		Ga0059261_4123	0.60	-1.2
4,281,700	+		Ga0059261_4123	0.78	-0.7
4,281,700	+		Ga0059261_4123	0.78	+2.4
4,281,700	+		Ga0059261_4123	0.78	+1.2
4,281,700	+		Ga0059261_4123	0.78	+2.0
4,281,700	+		Ga0059261_4123	0.78	+2.9
4,281,700	+				+0.0
4,281,700	+		Ga0059261_4123	0.78	+1.0
4,281,701	-		Ga0059261_4123	0.78	-0.6
4,281,701	-		Ga0059261_4123	0.78	-0.1
4,281,701	-		Ga0059261_4123	0.78	+0.4
4,281,701	-		Ga0059261_4123	0.78	+0.8
4,281,905	-		Ga0059261_4123	0.89	-1.5
4,281,905	-		Ga0059261_4123	0.89	+1.3
4,281,905	-		Ga0059261_4123	0.89	-2.9
4,281,905	-		Ga0059261_4123	0.89	+0.5
4,281,905	-		Ga0059261_4123	0.89	-0.3
4,281,905	-		Ga0059261_4123	0.89	-1.0
4,281,905	-		Ga0059261_4123	0.89	+0.5
4,281,934	+				-0.6
4,281,934	+				-0.4
4,281,934	+				+0.5
4,281,934	+				+4.1
4,281,934	+				+0.7
4,281,935	-				+0.6
4,281,935	-				+0.2
4,281,935	-				+2.7
4,281,935	-				+0.4
4,282,140	+				+0.8
4,282,140	+				+0.6
4,282,140	+				+0.6
4,282,141	-				+1.0
4,282,141	-				-2.6
4,282,333	+		Ga0059261_4124	0.24	+3.0
4,282,333	+		Ga0059261_4124	0.24	+0.7
4,282,333	+		Ga0059261_4124	0.24	+0.2
4,282,333	+		Ga0059261_4124	0.24	+0.5
4,282,333	+		Ga0059261_4124	0.24	+2.4
4,282,334	-		Ga0059261_4124	0.25	+1.1
4,282,334	-		Ga0059261_4124	0.25	-2.1
4,282,334	-		Ga0059261_4124	0.25	-1.5
4,282,334	-		Ga0059261_4124	0.25	-1.5
4,282,334	-		Ga0059261_4124	0.25	-0.9
4,282,334	-		Ga0059261_4124	0.25	+0.0
4,282,338	+		Ga0059261_4124	0.25	+1.7
4,282,339	-		Ga0059261_4124	0.25	-2.3
4,282,339	-		Ga0059261_4124	0.25	-0.8
4,282,339	-		Ga0059261_4124	0.25	+0.4
4,282,339	-		Ga0059261_4124	0.25	-0.3
4,282,735	+		Ga0059261_4124	0.82	-0.0
4,282,998	+				-1.0
4,282,999	-				-1.0
4,282,999	-				+4.0
4,282,999	-				-0.5
4,282,999	-				-1.0
4,283,092	+		Ga0059261_4125	0.25	+0.5
4,283,092	+		Ga0059261_4125	0.25	-0.6
4,283,093	-		Ga0059261_4125	0.26	-0.8
4,283,093	-		Ga0059261_4125	0.26	-0.2