Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3200

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
3,334,950	-				-1.8
3,335,029	+				+4.9
3,335,029	+				-1.4
3,335,029	+				+2.0
3,335,029	+				+1.0
3,335,029	+				+1.0
3,335,030	-				-0.4
3,335,030	-				+0.7
3,335,030	-				-0.4
3,335,030	-				-0.6
3,335,030	-				+0.2
3,335,061	+				-0.3
3,335,061	+				+0.6
3,335,062	-				-0.8
3,335,062	-				+0.1
3,335,062	-				-0.6
3,335,064	+				+0.6
3,335,065	-				-0.7
3,335,065	-				+1.9
3,335,065	-				+0.6
3,335,076	+				-1.2
3,335,076	+				-0.7
3,335,077	-				+1.8
3,335,083	+				-0.4
3,335,084	-				-0.1
3,335,090	+				+0.4
3,335,090	+				-0.9
3,335,090	+				-0.6
3,335,090	+				+0.6
3,335,090	+				-1.8
3,335,090	+				-0.4
3,335,090	+				+0.6
3,335,091	-				-0.3
3,335,091	-				-0.6
3,335,091	-				+0.9
3,335,096	+				-0.3
3,335,096	+				+0.6
3,335,096	+				+0.5
3,335,096	+				-1.1
3,335,097	-				-0.6
3,335,097	-				+1.7
3,335,097	-				+0.2
3,335,196	+		Ga0059261_3200	0.13	+1.8
3,335,196	+		Ga0059261_3200	0.13	+0.6
3,335,196	+		Ga0059261_3200	0.13	-1.0
3,335,196	+		Ga0059261_3200	0.13	+0.6
3,335,196	+		Ga0059261_3200	0.13	-0.2
3,335,196	+		Ga0059261_3200	0.13	-1.0
3,335,197	-		Ga0059261_3200	0.13	+0.6
3,335,197	-		Ga0059261_3200	0.13	+1.3
3,335,197	-		Ga0059261_3200	0.13	+1.7
3,335,197	-		Ga0059261_3200	0.13	+0.5
3,335,197	-		Ga0059261_3200	0.13	-0.6
3,335,197	-		Ga0059261_3200	0.13	-0.6
3,335,197	-		Ga0059261_3200	0.13	-0.0
3,335,197	-				+1.1
3,335,197	-		Ga0059261_3200	0.13	-0.1
3,335,218	-		Ga0059261_3200	0.16	-2.4
3,335,397	+		Ga0059261_3200	0.37	+0.1
3,335,397	+		Ga0059261_3200	0.37	-1.5
3,335,398	-		Ga0059261_3200	0.37	+2.3
3,335,398	-		Ga0059261_3200	0.37	-0.9
3,335,398	-		Ga0059261_3200	0.37	+0.0
3,335,400	+		Ga0059261_3200	0.38	-0.7
3,335,400	+		Ga0059261_3200	0.38	+0.2
3,335,400	+		Ga0059261_3200	0.38	+0.7
3,335,400	+		Ga0059261_3200	0.38	-1.2
3,335,400	+		Ga0059261_3200	0.38	+1.4
3,335,401	-		Ga0059261_3200	0.38	+0.6
3,335,517	+		Ga0059261_3200	0.51	-2.1
3,335,517	+		Ga0059261_3200	0.51	-1.6
3,335,517	+		Ga0059261_3200	0.51	+0.6
3,335,518	-		Ga0059261_3200	0.52	+0.4
3,335,518	-		Ga0059261_3200	0.52	-1.5
3,335,518	-		Ga0059261_3200	0.52	-1.1
3,335,518	-		Ga0059261_3200	0.52	-0.9
3,335,518	-		Ga0059261_3200	0.52	-0.2
3,335,518	-		Ga0059261_3200	0.52	-2.5
3,335,572	-		Ga0059261_3200	0.58	+2.4
3,335,573	+		Ga0059261_3200	0.58	-1.0
3,335,573	+		Ga0059261_3200	0.58	+0.1
3,335,573	+		Ga0059261_3200	0.58	+2.1
3,335,573	+		Ga0059261_3200	0.58	+0.6
3,335,574	-		Ga0059261_3200	0.58	-1.4
3,335,574	-		Ga0059261_3200	0.58	-2.3
3,335,574	-		Ga0059261_3200	0.58	+1.4
3,335,574	-		Ga0059261_3200	0.58	-0.1
3,335,574	-		Ga0059261_3200	0.58	+1.5
3,335,574	-		Ga0059261_3200	0.58	-2.4
3,335,574	-		Ga0059261_3200	0.58	-0.6
3,335,598	+		Ga0059261_3200	0.61	+0.6
3,335,598	+		Ga0059261_3200	0.61	-0.9
3,335,598	+		Ga0059261_3200	0.61	+0.6
3,335,598	+		Ga0059261_3200	0.61	-0.4
3,335,599	-		Ga0059261_3200	0.61	-0.0
3,335,599	-		Ga0059261_3200	0.61	-1.6
3,335,599	-		Ga0059261_3200	0.61	-0.0
3,335,599	-				+0.1
3,335,599	-		Ga0059261_3200	0.61	+0.9
3,335,599	-		Ga0059261_3200	0.61	+0.3
3,335,619	+		Ga0059261_3200	0.64	+0.1
3,335,620	-		Ga0059261_3200	0.64	+2.0
3,335,738	+		Ga0059261_3200	0.78	-0.4
3,335,738	+		Ga0059261_3200	0.78	+0.8
3,335,738	+		Ga0059261_3200	0.78	+1.1
3,335,738	+		Ga0059261_3200	0.78	-0.2
3,335,739	-		Ga0059261_3200	0.78	-2.2
3,335,760	+		Ga0059261_3200	0.80	-1.2
3,335,760	+		Ga0059261_3200	0.80	+0.7
3,335,760	+		Ga0059261_3200	0.80	-0.7
3,335,761	-		Ga0059261_3200	0.80	+0.0
3,335,766	+		Ga0059261_3200	0.81	-0.1
3,335,766	+		Ga0059261_3200	0.81	-0.9
3,335,766	+		Ga0059261_3200	0.81	-0.1
3,335,766	+		Ga0059261_3200	0.81	+0.4
3,335,766	+		Ga0059261_3200	0.81	+1.1
3,335,766	+		Ga0059261_3200	0.81	+0.6
3,335,767	-		Ga0059261_3200	0.81	-2.2
3,335,767	-		Ga0059261_3200	0.81	+1.1
3,335,767	-		Ga0059261_3200	0.81	-0.3
3,335,767	-		Ga0059261_3200	0.81	+1.6
3,335,767	-		Ga0059261_3200	0.81	+0.7
3,335,767	-		Ga0059261_3200	0.81	-1.0
3,335,776	-		Ga0059261_3200	0.82	+1.0
3,335,776	-				+2.1
3,335,922	+				-0.9
3,335,922	+				-0.9
3,335,923	-				+0.0
3,335,923	-				-0.7
3,335,988	+				-1.1
3,335,988	+				+1.1
3,335,988	+				+1.8
3,335,988	+				-0.7
3,335,988	+				+0.2
3,335,989	-				-1.3
3,335,989	-				-0.2
3,335,989	-				+0.7
3,336,071	+				+0.6
3,336,072	-				+1.6
3,336,168	+				+3.1
3,336,168	+				-0.0
3,336,168	+				+0.1
3,336,169	-				+0.7
3,336,169	-				-0.2
3,336,169	-				+0.8
3,336,169	-				-0.7
3,336,265	+		Ga0059261_3201	0.11	-0.0
3,336,265	+		Ga0059261_3201	0.11	-1.7
3,336,265	+		Ga0059261_3201	0.11	+1.1
3,336,265	+		Ga0059261_3201	0.11	-0.2
3,336,265	+		Ga0059261_3201	0.11	+0.0
3,336,266	-		Ga0059261_3201	0.11	-0.9
3,336,266	-		Ga0059261_3201	0.11	-0.9
3,336,266	-		Ga0059261_3201	0.11	-0.4
3,336,266	-		Ga0059261_3201	0.11	+0.6
3,336,266	-		Ga0059261_3201	0.11	-0.1
3,336,266	-		Ga0059261_3201	0.11	-0.5
3,336,266	-		Ga0059261_3201	0.11	-0.0
3,336,266	-		Ga0059261_3201	0.11	-0.9
3,336,266	-		Ga0059261_3201	0.11	+3.8
3,336,266	-		Ga0059261_3201	0.11	+0.4
3,336,434	+		Ga0059261_3201	0.22	+1.8
3,336,434	+		Ga0059261_3201	0.22	-0.0
3,336,434	+		Ga0059261_3201	0.22	-1.8
3,336,434	+		Ga0059261_3201	0.22	-0.4
3,336,434	+		Ga0059261_3201	0.22	+0.4
3,336,434	+		Ga0059261_3201	0.22	-0.0
3,336,435	-		Ga0059261_3201	0.22	-1.4
3,336,435	-		Ga0059261_3201	0.22	+2.7
3,336,435	-		Ga0059261_3201	0.22	+0.6
3,336,435	-		Ga0059261_3201	0.22	-1.4
3,336,509	+		Ga0059261_3201	0.27	+2.9
3,336,510	-		Ga0059261_3201	0.27	+1.5
3,336,510	-		Ga0059261_3201	0.27	-0.6
3,336,579	+		Ga0059261_3201	0.32	-1.2
3,336,579	+		Ga0059261_3201	0.32	+0.8
3,336,579	+		Ga0059261_3201	0.32	+0.7
3,336,579	+		Ga0059261_3201	0.32	-0.7
3,336,579	+		Ga0059261_3201	0.32	+0.0
3,336,580	-		Ga0059261_3201	0.32	+0.3
3,336,580	-		Ga0059261_3201	0.32	+0.1
3,336,580	-		Ga0059261_3201	0.32	+0.9
3,336,582	+		Ga0059261_3201	0.32	+2.5
3,336,582	+		Ga0059261_3201	0.32	-0.4
3,336,582	+		Ga0059261_3201	0.32	+0.7
3,336,582	+		Ga0059261_3201	0.32	+2.8
3,336,582	+		Ga0059261_3201	0.32	-0.5
3,336,582	+		Ga0059261_3201	0.32	+0.1
3,336,583	-		Ga0059261_3201	0.32	-0.0
3,336,583	-				+0.6
3,336,583	-		Ga0059261_3201	0.32	-1.4
3,336,583	-		Ga0059261_3201	0.32	+0.6
3,336,583	-		Ga0059261_3201	0.32	+0.1
3,336,583	-		Ga0059261_3201	0.32	+0.1
3,336,583	-		Ga0059261_3201	0.32	-0.3
3,336,583	-		Ga0059261_3201	0.32	-0.8
3,336,583	-		Ga0059261_3201	0.32	+1.3
3,336,587	+		Ga0059261_3201	0.32	-0.4
3,336,588	-		Ga0059261_3201	0.32	-0.6
3,336,875	+		Ga0059261_3201	0.52	-2.0
3,336,876	-		Ga0059261_3201	0.52	+2.4