Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3066

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
3,204,465	+		Ga0059261_3065	0.64	+0.7
3,204,465	+		Ga0059261_3065	0.64	-0.2
3,204,465	+		Ga0059261_3065	0.64	+2.5
3,204,466	-		Ga0059261_3065	0.64	-0.5
3,204,466	-		Ga0059261_3065	0.64	+0.7
3,204,466	-		Ga0059261_3065	0.64	+0.5
3,204,466	-		Ga0059261_3065	0.64	+0.8
3,204,466	-		Ga0059261_3065	0.64	-1.7
3,204,469	-		Ga0059261_3065	0.64	+0.1
3,204,527	+		Ga0059261_3065	0.67	-0.4
3,204,557	-		Ga0059261_3065	0.69	-0.5
3,204,557	-		Ga0059261_3065	0.69	-0.5
3,204,703	+		Ga0059261_3065	0.76	-0.2
3,204,703	+		Ga0059261_3065	0.76	+0.8
3,204,703	+		Ga0059261_3065	0.76	+0.2
3,204,946	+		Ga0059261_3065	0.88	+1.9
3,204,946	+		Ga0059261_3065	0.88	-0.3
3,204,946	+		Ga0059261_3065	0.88	-0.8
3,204,946	+		Ga0059261_3065	0.88	+0.1
3,204,947	-		Ga0059261_3065	0.88	+1.4
3,204,947	-		Ga0059261_3065	0.88	+2.3
3,205,226	+				+1.0
3,205,226	+				+0.4
3,205,227	-				-0.7
3,205,236	+				-0.4
3,205,236	+				-1.7
3,205,236	+				-2.5
3,205,237	-				-1.0
3,205,239	+				+2.5
3,205,239	+				+0.9
3,205,240	-				+0.4
3,205,240	-				+0.8
3,205,240	-				+1.2
3,205,275	-				-0.4
3,205,275	-				-0.3
3,205,286	+				+0.8
3,205,287	-				+0.6
3,205,287	-				-0.7
3,205,287	-				+0.6
3,205,287	-				-0.4
3,205,300	+				-1.8
3,205,300	+				+2.2
3,205,300	+				-0.2
3,205,405	+				+3.8
3,205,405	+				+1.0
3,205,406	-				+0.4
3,205,406	-				-0.2
3,205,406	-				+0.8
3,205,406	-				+1.2
3,205,461	-				+1.5
3,205,461	-				-0.3
3,205,461	-				+0.3
3,205,492	+				+0.9
3,205,492	+				-0.6
3,205,492	+				+0.1
3,205,493	-				+0.2
3,205,493	-				-1.2
3,205,493	-				+1.7
3,205,493	-				-1.4
3,205,575	+				+3.0
3,205,575	+				+1.2
3,205,576	-				-0.5
3,205,576	-				+2.8
3,205,576	-				-1.0
3,205,649	+		Ga0059261_3066	0.11	-1.0
3,205,650	-		Ga0059261_3066	0.11	+1.3
3,205,650	-		Ga0059261_3066	0.11	-0.3
3,205,650	-		Ga0059261_3066	0.11	-0.7
3,205,650	-		Ga0059261_3066	0.11	+1.7
3,205,650	-		Ga0059261_3066	0.11	-0.8
3,205,752	+		Ga0059261_3066	0.16	+2.3
3,205,752	+		Ga0059261_3066	0.16	-1.2
3,205,752	+		Ga0059261_3066	0.16	-0.1
3,205,753	-		Ga0059261_3066	0.16	-0.9
3,205,753	-		Ga0059261_3066	0.16	-1.0
3,205,753	-		Ga0059261_3066	0.16	+2.0
3,205,753	-		Ga0059261_3066	0.16	-0.8
3,205,753	-		Ga0059261_3066	0.16	-0.6
3,205,753	-		Ga0059261_3066	0.16	-2.5
3,205,780	+		Ga0059261_3066	0.18	-0.2
3,205,781	-		Ga0059261_3066	0.18	-0.6
3,205,781	-		Ga0059261_3066	0.18	-1.5
3,205,795	+		Ga0059261_3066	0.18	-0.2
3,205,892	+		Ga0059261_3066	0.24	+2.2
3,205,943	+		Ga0059261_3066	0.26	-0.0
3,205,944	-		Ga0059261_3066	0.27	+1.7
3,205,944	-		Ga0059261_3066	0.27	-0.7
3,205,944	-		Ga0059261_3066	0.27	-0.1
3,205,944	-		Ga0059261_3066	0.27	+0.4
3,205,944	-		Ga0059261_3066	0.27	+1.6
3,205,944	-		Ga0059261_3066	0.27	+0.4
3,205,944	-		Ga0059261_3066	0.27	-0.2
3,205,944	-		Ga0059261_3066	0.27	+0.8
3,205,944	-		Ga0059261_3066	0.27	-1.1
3,205,944	-		Ga0059261_3066	0.27	+0.3
3,205,969	+		Ga0059261_3066	0.28	-0.8
3,205,969	+		Ga0059261_3066	0.28	+0.0
3,205,969	+		Ga0059261_3066	0.28	-2.2
3,205,969	+		Ga0059261_3066	0.28	-0.5
3,205,969	+		Ga0059261_3066	0.28	-2.1
3,205,969	+		Ga0059261_3066	0.28	+1.5
3,205,970	-		Ga0059261_3066	0.28	-0.2
3,205,970	-		Ga0059261_3066	0.28	+0.9
3,205,970	-		Ga0059261_3066	0.28	-0.9
3,205,970	-		Ga0059261_3066	0.28	+1.6
3,205,970	-		Ga0059261_3066	0.28	-1.5
3,206,219	+		Ga0059261_3066	0.41	-0.7
3,206,219	+		Ga0059261_3066	0.41	-0.5
3,206,219	+		Ga0059261_3066	0.41	-1.3
3,206,219	+		Ga0059261_3066	0.41	+0.2
3,206,219	+		Ga0059261_3066	0.41	+3.4
3,206,219	+		Ga0059261_3066	0.41	-2.7
3,206,219	+		Ga0059261_3066	0.41	+0.2
3,206,219	+		Ga0059261_3066	0.41	+1.4
3,206,220	-		Ga0059261_3066	0.41	+0.1
3,206,220	-		Ga0059261_3066	0.41	-2.2
3,206,220	-		Ga0059261_3066	0.41	-0.6
3,206,220	-		Ga0059261_3066	0.41	-1.6
3,206,220	-		Ga0059261_3066	0.41	+0.6
3,206,220	-		Ga0059261_3066	0.41	-0.2
3,206,220	-		Ga0059261_3066	0.41	-0.1
3,206,220	-		Ga0059261_3066	0.41	+0.8
3,206,220	-		Ga0059261_3066	0.41	-0.9
3,206,223	+		Ga0059261_3066	0.42	+1.0
3,206,223	+		Ga0059261_3066	0.42	-1.2
3,206,223	+		Ga0059261_3066	0.42	+1.6
3,206,224	-		Ga0059261_3066	0.42	-0.3
3,206,224	-		Ga0059261_3066	0.42	+0.6
3,206,224	-		Ga0059261_3066	0.42	-1.7
3,206,224	-		Ga0059261_3066	0.42	-0.7
3,206,342	+		Ga0059261_3066	0.48	-0.6
3,206,342	+		Ga0059261_3066	0.48	-0.2
3,206,342	+		Ga0059261_3066	0.48	+1.4
3,206,343	-		Ga0059261_3066	0.48	+0.8
3,206,343	-		Ga0059261_3066	0.48	+1.4
3,206,343	-		Ga0059261_3066	0.48	-0.8
3,206,383	+		Ga0059261_3066	0.50	-1.1
3,206,383	+		Ga0059261_3066	0.50	-1.0
3,206,383	+		Ga0059261_3066	0.50	+0.9
3,206,384	-		Ga0059261_3066	0.50	+1.1
3,206,384	-		Ga0059261_3066	0.50	+1.0
3,206,384	-		Ga0059261_3066	0.50	+0.8
3,206,384	-		Ga0059261_3066	0.50	-0.6
3,206,419	+		Ga0059261_3066	0.52	-0.3
3,206,419	+		Ga0059261_3066	0.52	+0.8
3,206,420	-		Ga0059261_3066	0.52	-0.3
3,206,459	+		Ga0059261_3066	0.54	+0.2
3,206,459	+		Ga0059261_3066	0.54	-0.7
3,206,459	+		Ga0059261_3066	0.54	-0.4
3,206,459	+		Ga0059261_3066	0.54	-0.5
3,206,459	+		Ga0059261_3066	0.54	-3.4
3,206,459	+				+0.6
3,206,459	+		Ga0059261_3066	0.54	-0.3
3,206,460	-		Ga0059261_3066	0.54	+0.3
3,206,460	-		Ga0059261_3066	0.54	+2.2
3,206,460	-		Ga0059261_3066	0.54	-1.7
3,206,531	+		Ga0059261_3066	0.58	-0.6
3,206,531	+		Ga0059261_3066	0.58	-0.0
3,206,531	+		Ga0059261_3066	0.58	-0.8
3,206,531	+		Ga0059261_3066	0.58	-1.7
3,206,532	-		Ga0059261_3066	0.58	+0.4
3,206,532	-		Ga0059261_3066	0.58	+0.8
3,206,532	-		Ga0059261_3066	0.58	-1.3
3,206,610	+		Ga0059261_3066	0.62	-0.2
3,206,610	+		Ga0059261_3066	0.62	+1.8
3,206,610	+		Ga0059261_3066	0.62	+2.2
3,206,610	+		Ga0059261_3066	0.62	-1.5
3,206,610	+		Ga0059261_3066	0.62	+0.6
3,206,611	-		Ga0059261_3066	0.62	+1.0
3,206,611	-		Ga0059261_3066	0.62	-0.8
3,206,611	-		Ga0059261_3066	0.62	-1.3
3,206,611	-		Ga0059261_3066	0.62	-0.8
3,206,611	-		Ga0059261_3066	0.62	+0.2
3,206,611	-		Ga0059261_3066	0.62	+1.0
3,206,611	-		Ga0059261_3066	0.62	+0.2
3,206,628	+		Ga0059261_3066	0.63	+1.2
3,206,628	+		Ga0059261_3066	0.63	-2.3
3,206,628	+		Ga0059261_3066	0.63	+0.2
3,206,629	-		Ga0059261_3066	0.63	-1.3
3,206,629	-		Ga0059261_3066	0.63	-1.4
3,206,760	+		Ga0059261_3066	0.70	-2.6
3,206,761	-		Ga0059261_3066	0.70	+0.9
3,206,761	-		Ga0059261_3066	0.70	+0.8
3,206,761	-		Ga0059261_3066	0.70	-1.3
3,206,761	-		Ga0059261_3066	0.70	+0.4
3,206,774	+		Ga0059261_3066	0.71	-0.2
3,206,774	+		Ga0059261_3066	0.71	+0.4
3,206,774	+		Ga0059261_3066	0.71	-1.7
3,206,774	+		Ga0059261_3066	0.71	+1.8
3,206,774	+		Ga0059261_3066	0.71	+0.9
3,206,774	+		Ga0059261_3066	0.71	-1.8
3,206,774	+		Ga0059261_3066	0.71	-1.5
3,206,774	+		Ga0059261_3066	0.71	-0.4
3,206,774	+		Ga0059261_3066	0.71	-0.4
3,206,774	+		Ga0059261_3066	0.71	+0.9
3,206,774	+		Ga0059261_3066	0.71	+1.2
3,206,774	+		Ga0059261_3066	0.71	+3.5
3,206,775	-		Ga0059261_3066	0.71	+0.4
3,206,775	-		Ga0059261_3066	0.71	+0.4
3,206,775	-		Ga0059261_3066	0.71	-0.2
3,206,775	-		Ga0059261_3066	0.71	-0.7
3,206,775	-		Ga0059261_3066	0.71	-0.4
3,206,775	-		Ga0059261_3066	0.71	+2.4
3,206,775	-		Ga0059261_3066	0.71	-0.0
3,206,775	-		Ga0059261_3066	0.71	-0.4
3,206,775	-		Ga0059261_3066	0.71	+1.9
3,206,775	-		Ga0059261_3066	0.71	+0.2
3,206,852	+		Ga0059261_3066	0.75	+0.0
3,206,852	+		Ga0059261_3066	0.75	-1.4
3,206,852	+		Ga0059261_3066	0.75	-1.0
3,206,852	+		Ga0059261_3066	0.75	+0.4
3,206,852	+		Ga0059261_3066	0.75	+3.2
3,206,853	-		Ga0059261_3066	0.75	+0.4
3,206,853	-		Ga0059261_3066	0.75	-0.5
3,206,853	-		Ga0059261_3066	0.75	-0.8
3,206,853	-		Ga0059261_3066	0.75	-0.6
3,206,853	-		Ga0059261_3066	0.75	-1.3
3,206,853	-		Ga0059261_3066	0.75	+0.2
3,206,853	-		Ga0059261_3066	0.75	-1.6
3,206,853	-		Ga0059261_3066	0.75	-1.4
3,206,853	-		Ga0059261_3066	0.75	-1.3
3,206,854	+		Ga0059261_3066	0.75	-1.1
3,206,854	+		Ga0059261_3066	0.75	+0.2
3,206,854	+		Ga0059261_3066	0.75	+0.2
3,206,854	+		Ga0059261_3066	0.75	-1.4
3,206,854	+		Ga0059261_3066	0.75	-0.4
3,206,854	+		Ga0059261_3066	0.75	+1.7
3,206,855	-		Ga0059261_3066	0.75	+0.6
3,206,855	-		Ga0059261_3066	0.75	-0.4
3,206,855	-		Ga0059261_3066	0.75	+0.6
3,206,855	-		Ga0059261_3066	0.75	-0.4
3,206,986	+		Ga0059261_3066	0.83	-1.5
3,206,986	+		Ga0059261_3066	0.83	-1.8
3,206,987	-		Ga0059261_3066	0.83	+1.4
3,207,040	+		Ga0059261_3066	0.85	+1.9
3,207,040	+		Ga0059261_3066	0.85	-0.8
3,207,040	+		Ga0059261_3066	0.85	-0.4
3,207,040	+		Ga0059261_3066	0.85	-0.7
3,207,041	-		Ga0059261_3066	0.85	-0.7
3,207,041	-		Ga0059261_3066	0.85	-1.0
3,207,041	-		Ga0059261_3066	0.85	+1.4
3,207,041	-				+2.2
3,207,042	+		Ga0059261_3066	0.86	-1.2
3,207,095	+		Ga0059261_3066	0.88	+0.1
3,207,095	+		Ga0059261_3066	0.88	+0.8
3,207,095	+		Ga0059261_3066	0.88	-1.2
3,207,096	-		Ga0059261_3066	0.88	+0.6
3,207,189	+				+1.5
3,207,189	+				-1.0
3,207,189	+				-0.3
3,207,189	+				+0.7
3,207,190	-				-0.7
3,207,190	-				-0.5
3,207,190	-				-0.2
3,207,190	-				+0.5
3,207,190	-				-0.9
3,207,308	+				+3.6
3,207,309	-				-1.7
3,207,570	+		Ga0059261_3067	0.14	+0.2
3,207,570	+		Ga0059261_3067	0.14	-0.3
3,207,570	+		Ga0059261_3067	0.14	+1.9
3,207,571	-		Ga0059261_3067	0.14	-2.3
3,207,571	-		Ga0059261_3067	0.14	+1.1
3,207,571	-				-0.7
3,207,571	-		Ga0059261_3067	0.14	+0.4
3,207,574	+		Ga0059261_3067	0.14	-0.7
3,207,574	+		Ga0059261_3067	0.14	-1.3
3,207,574	+		Ga0059261_3067	0.14	+0.9
3,207,574	+		Ga0059261_3067	0.14	-1.4
3,207,574	+		Ga0059261_3067	0.14	-0.1
3,207,574	+		Ga0059261_3067	0.14	-0.8
3,207,574	+		Ga0059261_3067	0.14	+0.6
3,207,574	+		Ga0059261_3067	0.14	+1.2
3,207,574	+		Ga0059261_3067	0.14	-1.0
3,207,574	+		Ga0059261_3067	0.14	+0.2
3,207,574	+		Ga0059261_3067	0.14	-1.1
3,207,575	-		Ga0059261_3067	0.14	+3.9
3,207,575	-		Ga0059261_3067	0.14	-1.1
3,207,575	-		Ga0059261_3067	0.14	-0.3
3,207,575	-		Ga0059261_3067	0.14	-0.5
3,207,575	-		Ga0059261_3067	0.14	+0.6
3,207,613	+		Ga0059261_3067	0.16	-0.3
3,207,613	+		Ga0059261_3067	0.16	-0.7
3,207,613	+		Ga0059261_3067	0.16	+1.9
3,207,613	+		Ga0059261_3067	0.16	-0.7
3,207,614	-		Ga0059261_3067	0.16	-2.4
3,207,871	+		Ga0059261_3067	0.30	+3.2
3,207,871	+		Ga0059261_3067	0.30	-1.4
3,207,872	-		Ga0059261_3067	0.30	-1.8
3,207,872	-		Ga0059261_3067	0.30	-1.7
3,207,906	+		Ga0059261_3067	0.32	+1.0
3,207,906	+		Ga0059261_3067	0.32	-0.8
3,207,906	+		Ga0059261_3067	0.32	-1.3
3,207,907	-		Ga0059261_3067	0.32	+3.3
3,207,907	-		Ga0059261_3067	0.32	-1.0
3,207,957	-		Ga0059261_3067	0.35	+0.6
3,207,957	-		Ga0059261_3067	0.35	-2.0
3,207,957	-		Ga0059261_3067	0.35	+1.1
3,207,997	-		Ga0059261_3067	0.37	+0.3
3,208,147	+		Ga0059261_3067	0.45	-0.6
3,208,161	-		Ga0059261_3067	0.46	-0.4
3,208,162	+		Ga0059261_3067	0.46	+1.5
3,208,162	+		Ga0059261_3067	0.46	+0.6
3,208,162	+		Ga0059261_3067	0.46	+4.0
3,208,162	+		Ga0059261_3067	0.46	-0.3
3,208,163	-		Ga0059261_3067	0.46	-1.1
3,208,163	-		Ga0059261_3067	0.46	-0.3
3,208,185	+		Ga0059261_3067	0.47	+1.4
3,208,186	-		Ga0059261_3067	0.48	-1.8
3,208,186	-		Ga0059261_3067	0.48	+0.5
3,208,195	+		Ga0059261_3067	0.48	+2.7
3,208,195	+		Ga0059261_3067	0.48	-0.8
3,208,195	+		Ga0059261_3067	0.48	-2.5
3,208,195	+		Ga0059261_3067	0.48	+0.8
3,208,195	+		Ga0059261_3067	0.48	-0.8
3,208,195	+		Ga0059261_3067	0.48	+1.4
3,208,195	+		Ga0059261_3067	0.48	+0.4
3,208,195	+		Ga0059261_3067	0.48	+0.9
3,208,196	-		Ga0059261_3067	0.48	+0.2
3,208,196	-		Ga0059261_3067	0.48	+0.8
3,208,196	-		Ga0059261_3067	0.48	+1.6
3,208,196	-		Ga0059261_3067	0.48	+0.4
3,208,196	-		Ga0059261_3067	0.48	+1.2
3,208,196	-		Ga0059261_3067	0.48	-2.8
3,208,196	-		Ga0059261_3067	0.48	+0.8
3,208,196	-		Ga0059261_3067	0.48	+0.3
3,208,293	+		Ga0059261_3067	0.53	+0.3
3,208,293	+		Ga0059261_3067	0.53	-1.8
3,208,293	+		Ga0059261_3067	0.53	-0.2
3,208,293	+		Ga0059261_3067	0.53	-1.9
3,208,293	+		Ga0059261_3067	0.53	-0.7
3,208,293	+		Ga0059261_3067	0.53	+1.0
3,208,293	+		Ga0059261_3067	0.53	-1.2
3,208,293	+		Ga0059261_3067	0.53	-0.5
3,208,294	-		Ga0059261_3067	0.53	+2.0
3,208,294	-		Ga0059261_3067	0.53	-1.0
3,208,294	-		Ga0059261_3067	0.53	+0.5
3,208,294	-		Ga0059261_3067	0.53	-1.1
3,208,294	-		Ga0059261_3067	0.53	+0.3
3,208,294	-		Ga0059261_3067	0.53	+0.2