Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2464

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
2,545,346	+		Ga0059261_2463	0.44	+0.8
2,545,346	+		Ga0059261_2463	0.44	-1.0
2,545,346	+		Ga0059261_2463	0.44	+2.2
2,545,347	-		Ga0059261_2463	0.44	+0.4
2,545,347	-				-0.4
2,545,347	-		Ga0059261_2463	0.44	+0.0
2,545,347	-		Ga0059261_2463	0.44	+0.6
2,545,404	+		Ga0059261_2463	0.48	-0.4
2,545,404	+		Ga0059261_2463	0.48	-0.1
2,545,619	+		Ga0059261_2463	0.62	-0.0
2,545,619	+		Ga0059261_2463	0.62	+1.2
2,545,619	+		Ga0059261_2463	0.62	+3.5
2,545,619	+		Ga0059261_2463	0.62	+0.6
2,545,619	+		Ga0059261_2463	0.62	-0.2
2,545,619	+		Ga0059261_2463	0.62	-0.7
2,545,619	+		Ga0059261_2463	0.62	+1.4
2,545,619	+		Ga0059261_2463	0.62	-0.8
2,545,619	+		Ga0059261_2463	0.62	-1.0
2,545,620	-		Ga0059261_2463	0.62	-0.5
2,545,620	-		Ga0059261_2463	0.62	-1.7
2,545,620	-		Ga0059261_2463	0.62	+0.5
2,545,620	-		Ga0059261_2463	0.62	-0.4
2,545,620	-		Ga0059261_2463	0.62	-1.2
2,545,620	-		Ga0059261_2463	0.62	+1.0
2,545,620	-		Ga0059261_2463	0.62	-1.0
2,545,620	-		Ga0059261_2463	0.62	-0.3
2,545,620	-		Ga0059261_2463	0.62	+0.1
2,545,620	-		Ga0059261_2463	0.62	-1.1
2,545,620	-		Ga0059261_2463	0.62	+1.9
2,545,620	-		Ga0059261_2463	0.62	-1.5
2,545,620	-		Ga0059261_2463	0.62	+0.6
2,545,778	+		Ga0059261_2463	0.72	-1.6
2,545,778	+		Ga0059261_2463	0.72	-0.3
2,545,778	+		Ga0059261_2463	0.72	-1.7
2,545,779	-		Ga0059261_2463	0.72	+0.3
2,545,779	-		Ga0059261_2463	0.72	+1.2
2,545,779	-		Ga0059261_2463	0.72	-0.1
2,545,874	+		Ga0059261_2463	0.79	+1.1
2,545,874	+		Ga0059261_2463	0.79	-0.6
2,545,874	+		Ga0059261_2463	0.79	-2.1
2,545,875	-		Ga0059261_2463	0.79	-0.6
2,545,875	-		Ga0059261_2463	0.79	-1.1
2,545,875	-		Ga0059261_2463	0.79	+0.5
2,545,875	-		Ga0059261_2463	0.79	-0.0
2,545,875	-		Ga0059261_2463	0.79	-0.7
2,545,898	+		Ga0059261_2463	0.80	-0.2
2,545,899	-		Ga0059261_2463	0.80	-1.7
2,545,967	+		Ga0059261_2463	0.85	+0.3
2,545,967	+		Ga0059261_2463	0.85	-0.0
2,545,967	+		Ga0059261_2463	0.85	+2.2
2,545,967	+				+3.2
2,545,967	+		Ga0059261_2463	0.85	+0.4
2,545,967	+		Ga0059261_2463	0.85	+0.8
2,545,967	+		Ga0059261_2463	0.85	-0.5
2,545,967	+		Ga0059261_2463	0.85	-0.2
2,545,968	-		Ga0059261_2463	0.85	+0.6
2,545,968	-		Ga0059261_2463	0.85	-0.1
2,545,968	-		Ga0059261_2463	0.85	+0.6
2,545,968	-				+4.8
2,545,973	+		Ga0059261_2463	0.85	+1.4
2,545,973	+		Ga0059261_2463	0.85	+0.3
2,545,973	+		Ga0059261_2463	0.85	+0.1
2,545,973	+		Ga0059261_2463	0.85	-0.1
2,545,973	+		Ga0059261_2463	0.85	+0.2
2,545,973	+		Ga0059261_2463	0.85	-1.6
2,545,973	+		Ga0059261_2463	0.85	-0.2
2,545,973	+		Ga0059261_2463	0.85	+0.5
2,545,974	-		Ga0059261_2463	0.85	-3.0
2,545,974	-		Ga0059261_2463	0.85	+1.2
2,545,974	-		Ga0059261_2463	0.85	+0.6
2,545,974	-		Ga0059261_2463	0.85	+0.3
2,545,974	-		Ga0059261_2463	0.85	+0.5
2,545,974	-		Ga0059261_2463	0.85	+0.3
2,545,974	-		Ga0059261_2463	0.85	-1.1
2,545,986	-		Ga0059261_2463	0.86	-0.4
2,546,087	+				-1.2
2,546,087	+				-0.4
2,546,088	-				-1.4
2,546,088	-				-0.5
2,546,088	-				-3.3
2,546,153	+				-0.5
2,546,153	+				+3.2
2,546,154	-				+0.8
2,546,154	-				+0.3
2,546,154	-				-1.8
2,546,210	+				+0.6
2,546,210	+				+0.6
2,546,210	+				-1.2
2,546,210	+				+1.0
2,546,210	+				-1.0
2,546,211	-				-1.5
2,546,263	+				+0.0
2,546,263	+				-0.6
2,546,264	-				-0.5
2,546,264	-				-0.9
2,546,409	+				-1.1
2,546,409	+				-1.5
2,546,410	-				-1.2
2,546,410	-				+2.2
2,546,410	-				+2.2
2,546,416	+				-0.4
2,546,416	+				-0.6
2,546,416	+				+0.0
2,546,417	-				+0.9
2,546,417	-				-1.5
2,546,417	-				-1.4
2,546,417	-				+0.6
2,546,683	+				+3.2
2,546,683	+		Ga0059261_2464	0.15	+2.8
2,546,683	+		Ga0059261_2464	0.15	+0.3
2,546,683	+		Ga0059261_2464	0.15	-1.6
2,546,683	+		Ga0059261_2464	0.15	+1.0
2,546,683	+		Ga0059261_2464	0.15	+0.4
2,546,683	+		Ga0059261_2464	0.15	-1.4
2,546,684	-		Ga0059261_2464	0.15	-0.9
2,546,684	-		Ga0059261_2464	0.15	+0.1
2,546,684	-		Ga0059261_2464	0.15	-0.6
2,546,684	-		Ga0059261_2464	0.15	+1.4
2,546,684	-		Ga0059261_2464	0.15	+0.8
2,546,715	+		Ga0059261_2464	0.16	-1.0
2,546,716	-		Ga0059261_2464	0.16	-0.0
2,546,716	-		Ga0059261_2464	0.16	+0.0
2,546,885	-		Ga0059261_2464	0.23	+0.1
2,547,058	+		Ga0059261_2464	0.30	-0.8
2,547,058	+		Ga0059261_2464	0.30	-0.1
2,547,058	+		Ga0059261_2464	0.30	+0.2
2,547,059	-		Ga0059261_2464	0.30	-0.1
2,547,059	-		Ga0059261_2464	0.30	-1.3
2,547,059	-		Ga0059261_2464	0.30	-1.6
2,547,059	-		Ga0059261_2464	0.30	+1.2
2,547,059	-		Ga0059261_2464	0.30	-1.2
2,547,059	-		Ga0059261_2464	0.30	-0.3
2,547,059	-		Ga0059261_2464	0.30	-1.3
2,547,059	-		Ga0059261_2464	0.30	+1.7
2,547,086	-		Ga0059261_2464	0.31	+0.8
2,547,142	+		Ga0059261_2464	0.33	-0.7
2,547,143	-		Ga0059261_2464	0.33	+0.2
2,547,248	+		Ga0059261_2464	0.38	-0.6
2,547,248	+		Ga0059261_2464	0.38	-1.2
2,547,249	-		Ga0059261_2464	0.38	-1.3
2,547,393	+		Ga0059261_2464	0.43	-0.2
2,547,394	-		Ga0059261_2464	0.43	-0.3
2,547,586	+		Ga0059261_2464	0.51	-0.6
2,547,586	+		Ga0059261_2464	0.51	-0.6
2,547,586	+		Ga0059261_2464	0.51	-0.4
2,547,586	+		Ga0059261_2464	0.51	-0.0
2,547,586	+		Ga0059261_2464	0.51	-1.0
2,547,586	+		Ga0059261_2464	0.51	-2.7
2,547,586	+		Ga0059261_2464	0.51	+0.9
2,547,587	-		Ga0059261_2464	0.51	-0.9
2,547,587	-		Ga0059261_2464	0.51	+0.4
2,547,587	-		Ga0059261_2464	0.51	+1.2
2,547,587	-		Ga0059261_2464	0.51	-0.5
2,547,587	-		Ga0059261_2464	0.51	+0.5
2,547,587	-		Ga0059261_2464	0.51	-0.6
2,547,587	-				+2.2
2,547,799	+		Ga0059261_2464	0.60	+0.2
2,547,799	+		Ga0059261_2464	0.60	+0.5
2,547,799	+		Ga0059261_2464	0.60	-0.1
2,547,799	+		Ga0059261_2464	0.60	-0.5
2,548,132	+		Ga0059261_2464	0.73	-0.9
2,548,132	+		Ga0059261_2464	0.73	-1.2
2,548,132	+		Ga0059261_2464	0.73	-1.0
2,548,132	+		Ga0059261_2464	0.73	+2.2
2,548,132	+		Ga0059261_2464	0.73	+0.4
2,548,132	+		Ga0059261_2464	0.73	-1.5
2,548,133	-		Ga0059261_2464	0.73	-2.0
2,548,133	-		Ga0059261_2464	0.73	+1.4
2,548,133	-		Ga0059261_2464	0.73	+0.8
2,548,133	-		Ga0059261_2464	0.73	+0.3
2,548,133	-		Ga0059261_2464	0.73	-2.5
2,548,133	-		Ga0059261_2464	0.73	+0.2
2,548,279	+		Ga0059261_2464	0.79	-2.0
2,548,279	+		Ga0059261_2464	0.79	-0.0
2,548,279	+		Ga0059261_2464	0.79	-1.3
2,548,279	+		Ga0059261_2464	0.79	-1.6
2,548,279	+		Ga0059261_2464	0.79	+1.1
2,548,279	+		Ga0059261_2464	0.79	+0.2
2,548,280	-		Ga0059261_2464	0.79	+1.1
2,548,280	-		Ga0059261_2464	0.79	-1.2
2,548,280	-		Ga0059261_2464	0.79	+0.2
2,548,282	+		Ga0059261_2464	0.79	-1.4
2,548,282	+		Ga0059261_2464	0.79	-0.4
2,548,282	+		Ga0059261_2464	0.79	-0.7
2,548,282	+		Ga0059261_2464	0.79	-2.1
2,548,282	+		Ga0059261_2464	0.79	+1.6
2,548,282	+		Ga0059261_2464	0.79	+1.9
2,548,283	-				+0.6
2,548,283	-		Ga0059261_2464	0.79	-1.6
2,548,283	-		Ga0059261_2464	0.79	+2.6
2,548,283	-		Ga0059261_2464	0.79	+1.4
2,548,465	+		Ga0059261_2464	0.86	-0.2
2,548,466	-		Ga0059261_2464	0.86	+0.9
2,548,477	+		Ga0059261_2464	0.87	+1.6
2,548,477	+		Ga0059261_2464	0.87	+0.1
2,548,477	+		Ga0059261_2464	0.87	-1.5
2,548,477	+		Ga0059261_2464	0.87	+1.0
2,548,478	-		Ga0059261_2464	0.87	-0.3
2,548,478	-		Ga0059261_2464	0.87	-0.6
2,548,553	-		Ga0059261_2464	0.90	-0.5
2,548,553	-		Ga0059261_2464	0.90	+0.9
2,548,751	-				+2.2
2,548,751	-				-0.6
2,548,751	-				-0.2
2,548,793	+				-0.5
2,548,794	-				-2.5
2,548,794	-				-0.1
2,548,810	-				-0.6
2,548,810	-				+1.6
2,548,839	+				-0.2
2,548,840	-				-1.1
2,548,917	+		Ga0059261_2465	0.12	-2.5
2,548,917	+		Ga0059261_2465	0.12	+1.1
2,548,917	+		Ga0059261_2465	0.12	+1.0
2,548,918	-		Ga0059261_2465	0.12	-0.1
2,548,918	-		Ga0059261_2465	0.12	-1.2
2,548,918	-		Ga0059261_2465	0.12	-1.7
2,549,154	+		Ga0059261_2465	0.38	+1.6
2,549,154	+		Ga0059261_2465	0.38	-1.3
2,549,154	+		Ga0059261_2465	0.38	+0.5
2,549,154	+		Ga0059261_2465	0.38	-0.4
2,549,155	-		Ga0059261_2465	0.38	-1.2
2,549,155	-		Ga0059261_2465	0.38	-2.2
2,549,155	-		Ga0059261_2465	0.38	-1.4
2,549,155	-		Ga0059261_2465	0.38	+0.9
2,549,155	-		Ga0059261_2465	0.38	-0.3
2,549,155	-		Ga0059261_2465	0.38	-2.5
2,549,155	-		Ga0059261_2465	0.38	-1.6
2,549,155	-		Ga0059261_2465	0.38	-0.8
2,549,313	-		Ga0059261_2465	0.55	-1.3
2,549,412	+		Ga0059261_2465	0.66	-0.4
2,549,412	+		Ga0059261_2465	0.66	-0.6
2,549,412	+		Ga0059261_2465	0.66	-0.7
2,549,412	+		Ga0059261_2465	0.66	-1.0
2,549,412	+		Ga0059261_2465	0.66	-0.2
2,549,413	-				-0.2
2,549,413	-		Ga0059261_2465	0.66	+0.4
2,549,413	-		Ga0059261_2465	0.66	-0.2
2,549,413	-		Ga0059261_2465	0.66	+2.2
2,549,413	-		Ga0059261_2465	0.66	-0.2
2,549,413	-		Ga0059261_2465	0.66	-1.0
2,549,413	-		Ga0059261_2465	0.66	+0.1
2,549,425	-		Ga0059261_2465	0.67	-0.5
2,549,425	-		Ga0059261_2465	0.67	-1.2
2,549,425	-		Ga0059261_2465	0.67	-2.5
2,549,592	+		Ga0059261_2465	0.85	+0.7
2,549,592	+		Ga0059261_2465	0.85	+1.3
2,549,593	-		Ga0059261_2465	0.85	+0.3
2,549,593	-		Ga0059261_2465	0.85	+1.9
2,549,632	-		Ga0059261_2465	0.89	+1.9
2,549,632	-		Ga0059261_2465	0.89	-1.2
2,549,720	-				-0.2
2,549,775	+				+1.0
2,549,776	-				-0.0