Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2428

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
2,518,530	+		Ga0059261_2425	0.55	-0.1
2,518,531	-		Ga0059261_2425	0.55	+1.1
2,518,608	+		Ga0059261_2425	0.69	-1.3
2,518,609	-		Ga0059261_2425	0.69	+3.2
2,518,609	-		Ga0059261_2425	0.69	+1.6
2,518,609	-		Ga0059261_2425	0.69	-0.4
2,518,609	-		Ga0059261_2425	0.69	+1.8
2,518,609	-		Ga0059261_2425	0.69	+1.6
2,518,641	+		Ga0059261_2425	0.75	-0.6
2,518,642	-		Ga0059261_2425	0.75	+0.5
2,518,676	+		Ga0059261_2425	0.81	+1.0
2,518,677	-		Ga0059261_2425	0.81	+0.0
2,518,677	-		Ga0059261_2425	0.81	-0.3
2,518,677	-		Ga0059261_2425	0.81	-2.1
2,518,677	-		Ga0059261_2425	0.81	+0.2
2,518,677	-		Ga0059261_2425	0.81	-2.0
2,518,677	-		Ga0059261_2425	0.81	-1.3
2,518,755	+				+1.3
2,518,755	+				+2.0
2,518,756	-				-0.3
2,518,756	-				+0.6
2,518,756	-				+2.2
2,518,759	-				-0.0
2,518,795	+				+2.1
2,518,877	+				-0.2
2,518,877	+				-0.6
2,518,877	+				+2.9
2,518,877	+				-0.3
2,518,878	-				-0.1
2,518,878	-				+1.4
2,519,079	+		Ga0059261_2426	0.44	-0.2
2,519,080	-		Ga0059261_2426	0.45	+0.3
2,519,118	+		Ga0059261_2426	0.53	+0.7
2,519,118	+		Ga0059261_2426	0.53	-0.2
2,519,118	+		Ga0059261_2426	0.53	-0.6
2,519,118	+		Ga0059261_2426	0.53	-0.2
2,519,118	+		Ga0059261_2426	0.53	+0.7
2,519,119	-		Ga0059261_2426	0.53	-0.7
2,519,119	-		Ga0059261_2426	0.53	+2.0
2,519,119	-		Ga0059261_2426	0.53	+0.4
2,519,123	+		Ga0059261_2426	0.54	+3.3
2,519,123	+		Ga0059261_2426	0.54	-0.5
2,519,130	+		Ga0059261_2426	0.56	+0.2
2,519,130	+		Ga0059261_2426	0.56	-2.4
2,519,130	+		Ga0059261_2426	0.56	+3.6
2,519,130	+		Ga0059261_2426	0.56	-1.1
2,519,131	-		Ga0059261_2426	0.56	+0.9
2,519,131	-		Ga0059261_2426	0.56	+0.6
2,519,131	-		Ga0059261_2426	0.56	-0.0
2,519,131	-		Ga0059261_2426	0.56	+0.2
2,519,131	-		Ga0059261_2426	0.56	+0.9
2,519,131	-		Ga0059261_2426	0.56	+0.8
2,519,232	+		Ga0059261_2426	0.78	+0.0
2,519,232	+		Ga0059261_2426	0.78	-1.4
2,519,232	+		Ga0059261_2426	0.78	-0.4
2,519,232	+		Ga0059261_2426	0.78	+0.5
2,519,232	+		Ga0059261_2426	0.78	-0.8
2,519,233	-		Ga0059261_2426	0.78	-1.0
2,519,233	-		Ga0059261_2426	0.78	-2.1
2,519,233	-		Ga0059261_2426	0.78	+1.9
2,519,233	-		Ga0059261_2426	0.78	-0.8
2,519,233	-		Ga0059261_2426	0.78	+0.4
2,519,233	-		Ga0059261_2426	0.78	+0.5
2,519,233	-		Ga0059261_2426	0.78	-1.3
2,519,233	-		Ga0059261_2426	0.78	+1.5
2,519,234	+		Ga0059261_2426	0.79	+1.1
2,519,235	-		Ga0059261_2426	0.79	-0.1
2,519,235	-		Ga0059261_2426	0.79	+1.6
2,519,235	-		Ga0059261_2426	0.79	+0.0
2,519,328	+				-1.0
2,519,329	-				+1.6
2,519,329	-				+1.2
2,519,343	-				-1.6
2,519,352	+				-1.1
2,519,352	+				-2.0
2,519,352	+				+0.4
2,519,352	+				+1.1
2,519,352	+				-1.8
2,519,352	+				+0.4
2,519,353	-				-0.4
2,519,353	-				+1.1
2,519,353	-				+2.6
2,519,353	-				-1.1
2,519,353	-				+1.9
2,519,353	-				+0.4
2,519,374	-				-0.0
2,519,400	+		Ga0059261_2427	0.14	+3.6
2,519,400	+		Ga0059261_2427	0.14	-1.4
2,519,473	+		Ga0059261_2427	0.58	+2.5
2,519,474	-		Ga0059261_2427	0.58	-0.9
2,519,479	+		Ga0059261_2427	0.61	-0.5
2,519,479	+		Ga0059261_2427	0.61	+0.3
2,519,479	+		Ga0059261_2427	0.61	-0.5
2,519,480	-		Ga0059261_2427	0.62	-0.8
2,519,480	-		Ga0059261_2427	0.62	+1.0
2,519,480	-		Ga0059261_2427	0.62	+1.3
2,519,480	-		Ga0059261_2427	0.62	+1.4
2,519,493	+		Ga0059261_2427	0.70	-1.4
2,519,493	+		Ga0059261_2427	0.70	-0.4
2,519,493	+		Ga0059261_2427	0.70	-1.1
2,519,493	+		Ga0059261_2427	0.70	-0.6
2,519,493	+		Ga0059261_2427	0.70	+0.0
2,519,494	-		Ga0059261_2427	0.70	-1.5
2,519,494	-		Ga0059261_2427	0.70	+1.8
2,519,494	-		Ga0059261_2427	0.70	+1.4
2,519,494	-		Ga0059261_2427	0.70	-1.0
2,519,494	-		Ga0059261_2427	0.70	-1.5
2,519,494	-		Ga0059261_2427	0.70	-0.6
2,519,494	-		Ga0059261_2427	0.70	+1.0
2,519,579	+				+2.4
2,519,579	+				+0.3
2,519,580	-				-0.3
2,519,620	+		Ga0059261_2428	0.11	+0.0
2,519,621	-		Ga0059261_2428	0.11	+1.2
2,519,631	+		Ga0059261_2428	0.12	+0.3
2,519,631	+		Ga0059261_2428	0.12	-1.0
2,519,631	+		Ga0059261_2428	0.12	-0.8
2,519,631	+		Ga0059261_2428	0.12	+0.5
2,519,631	+		Ga0059261_2428	0.12	-0.3
2,519,631	+		Ga0059261_2428	0.12	-1.2
2,519,631	+		Ga0059261_2428	0.12	-1.7
2,519,632	-		Ga0059261_2428	0.12	+0.9
2,519,632	-		Ga0059261_2428	0.12	+0.0
2,519,632	-		Ga0059261_2428	0.12	-1.2
2,519,632	-		Ga0059261_2428	0.12	+0.4
2,519,632	-				+1.6
2,519,632	-		Ga0059261_2428	0.12	+1.2
2,519,632	-		Ga0059261_2428	0.12	+0.1
2,519,647	+		Ga0059261_2428	0.14	+0.2
2,519,647	+		Ga0059261_2428	0.14	+0.2
2,519,647	+		Ga0059261_2428	0.14	-0.1
2,519,647	+		Ga0059261_2428	0.14	-0.3
2,519,647	+		Ga0059261_2428	0.14	+1.0
2,519,648	-		Ga0059261_2428	0.14	+0.5
2,519,648	-		Ga0059261_2428	0.14	-0.1
2,519,648	-		Ga0059261_2428	0.14	+0.5
2,519,665	+				+0.6
2,519,665	+		Ga0059261_2428	0.16	-1.3
2,519,666	-				+1.2
2,519,691	+		Ga0059261_2428	0.19	+2.4
2,519,691	+		Ga0059261_2428	0.19	+0.1
2,519,691	+		Ga0059261_2428	0.19	-0.8
2,519,692	-		Ga0059261_2428	0.19	-0.4
2,519,692	-		Ga0059261_2428	0.19	+0.4
2,519,692	-		Ga0059261_2428	0.19	-1.2
2,519,775	+		Ga0059261_2428	0.29	-0.5
2,519,775	+		Ga0059261_2428	0.29	+0.1
2,519,776	-		Ga0059261_2428	0.29	-1.7
2,519,776	-		Ga0059261_2428	0.29	-0.6
2,519,776	-		Ga0059261_2428	0.29	-0.1
2,519,776	-		Ga0059261_2428	0.29	+0.6
2,519,837	-		Ga0059261_2428	0.36	+0.7
2,519,850	-		Ga0059261_2428	0.38	-0.2
2,519,850	-		Ga0059261_2428	0.38	-0.1
2,519,850	-		Ga0059261_2428	0.38	+0.6
2,519,850	-		Ga0059261_2428	0.38	+0.1
2,519,850	-		Ga0059261_2428	0.38	+2.0
2,519,857	+		Ga0059261_2428	0.38	-1.0
2,519,857	+		Ga0059261_2428	0.38	+1.2
2,519,857	+		Ga0059261_2428	0.38	-0.8
2,519,858	-		Ga0059261_2428	0.38	-1.6
2,519,858	-		Ga0059261_2428	0.38	-0.3
2,519,858	-		Ga0059261_2428	0.38	-0.1
2,519,858	-		Ga0059261_2428	0.38	+0.2
2,519,891	+		Ga0059261_2428	0.42	-0.1
2,519,891	+		Ga0059261_2428	0.42	-1.5
2,519,891	+		Ga0059261_2428	0.42	-0.9
2,519,891	+		Ga0059261_2428	0.42	+0.6
2,519,891	+		Ga0059261_2428	0.42	+1.6
2,519,891	+		Ga0059261_2428	0.42	+0.8
2,519,892	-		Ga0059261_2428	0.42	+2.9
2,519,892	-		Ga0059261_2428	0.42	-0.8
2,519,892	-		Ga0059261_2428	0.42	+0.1
2,519,892	-		Ga0059261_2428	0.42	-0.6
2,519,892	-		Ga0059261_2428	0.42	-1.7
2,519,892	-		Ga0059261_2428	0.42	-1.6
2,519,892	-		Ga0059261_2428	0.42	+0.2
2,519,892	-		Ga0059261_2428	0.42	+2.6
2,519,892	-		Ga0059261_2428	0.42	+1.2
2,519,920	+		Ga0059261_2428	0.46	-0.3
2,519,921	-		Ga0059261_2428	0.46	+2.7
2,519,921	-		Ga0059261_2428	0.46	-1.6
2,519,921	-		Ga0059261_2428	0.46	-1.3
2,519,921	-		Ga0059261_2428	0.46	-1.6
2,519,950	+		Ga0059261_2428	0.49	+0.2
2,519,951	-		Ga0059261_2428	0.49	+0.5
2,519,951	-		Ga0059261_2428	0.49	+5.0
2,519,951	-		Ga0059261_2428	0.49	+1.1
2,519,951	-		Ga0059261_2428	0.49	+0.2
2,519,956	-		Ga0059261_2428	0.50	-0.1
2,520,042	+		Ga0059261_2428	0.60	-0.1
2,520,043	-		Ga0059261_2428	0.60	+0.3
2,520,043	-		Ga0059261_2428	0.60	-1.6
2,520,056	+		Ga0059261_2428	0.61	-0.7
2,520,057	-		Ga0059261_2428	0.62	-0.6
2,520,110	+		Ga0059261_2428	0.68	-0.8
2,520,110	+		Ga0059261_2428	0.68	-0.5
2,520,110	+		Ga0059261_2428	0.68	-2.0
2,520,111	-		Ga0059261_2428	0.68	-0.2
2,520,111	-		Ga0059261_2428	0.68	-0.8
2,520,184	-		Ga0059261_2428	0.76	-0.6
2,520,231	+		Ga0059261_2428	0.82	+1.3
2,520,231	+		Ga0059261_2428	0.82	-1.7
2,520,235	+		Ga0059261_2428	0.82	-1.5
2,520,235	+		Ga0059261_2428	0.82	-0.4
2,520,236	-		Ga0059261_2428	0.82	-1.7
2,520,275	+		Ga0059261_2428	0.87	+0.9
2,520,275	+		Ga0059261_2428	0.87	-0.5
2,520,276	-				+1.2
2,520,276	-		Ga0059261_2428	0.87	-1.5
2,520,289	+		Ga0059261_2428	0.89	-0.4
2,520,290	-		Ga0059261_2428	0.89	-2.3
2,520,290	-		Ga0059261_2428	0.89	-1.0
2,520,290	-		Ga0059261_2428	0.89	+2.2
2,520,333	+				-0.1
2,520,333	+				-0.8
2,520,361	+				-0.6
2,520,362	-				+1.5
2,520,362	-				+0.7
2,520,418	+				-1.4
2,520,457	+				+1.2
2,520,457	+				+2.2
2,520,458	-				+1.1
2,520,463	+				-0.8
2,520,464	-				+1.6
2,520,474	+				+0.1
2,520,475	-				-0.6
2,520,475	-				+1.1
2,520,475	-				-0.1
2,520,476	+				-0.1
2,520,477	-				-0.7
2,520,477	-				-0.4
2,520,491	+				+3.5
2,520,491	+				+0.0
2,520,572	-				-0.8
2,520,572	-				-2.1
2,520,572	-				-1.7
2,520,572	-				+1.7
2,520,573	+				-1.1
2,520,573	+				-1.1
2,520,573	+				+0.0
2,520,574	-				+0.5
2,520,577	+				-0.1
2,520,642	+				-0.9
2,520,642	+				-0.4
2,520,642	+				-1.0
2,520,642	+				+0.5
2,520,642	+				-0.9
2,520,643	-				-1.5
2,520,643	-				-0.7
2,520,643	-				+0.8
2,520,643	-				+0.2
2,520,643	-				+2.1
2,520,643	-				+1.5
2,520,647	+				-0.1
2,520,647	+				-0.3
2,520,647	+				+1.2
2,520,647	+				-0.8
2,520,647	+				-1.6
2,520,647	+				-1.5
2,520,647	+				+3.9
2,520,647	+				+0.5
2,520,647	+				-0.8
2,520,648	-				-2.1
2,520,648	-				-0.3
2,520,648	-				+0.6
2,520,648	-				+0.0
2,520,648	-				+0.6
2,520,648	-				-1.1
2,520,648	-				-0.7
2,520,648	-				-0.2
2,520,648	-				+1.0
2,520,648	-				+2.0
2,520,680	+				+0.7
2,520,680	+				+3.2
2,520,680	+				-0.8
2,520,680	+				+0.9
2,520,680	+				+0.7
2,520,680	+				+1.2
2,520,680	+				+0.4
2,520,680	+				+1.9
2,520,680	+				+0.6
2,520,680	+				+1.1
2,520,681	-				+2.4
2,520,681	-				-1.1
2,520,681	-				+0.4
2,520,681	-				-0.9
2,520,681	-				-0.9
2,520,681	-				-0.1
2,520,681	-				+1.6
2,520,905	-		Ga0059261_2429	0.49	-2.1
2,521,031	+		Ga0059261_2429	0.74	-0.1
2,521,031	+		Ga0059261_2429	0.74	+1.7
2,521,031	+		Ga0059261_2429	0.74	-1.4
2,521,031	+		Ga0059261_2429	0.74	+2.1
2,521,031	+		Ga0059261_2429	0.74	-0.1
2,521,031	+		Ga0059261_2429	0.74	-0.8
2,521,031	+		Ga0059261_2429	0.74	-0.6
2,521,032	-		Ga0059261_2429	0.74	-0.4
2,521,032	-		Ga0059261_2429	0.74	+0.2
2,521,032	-		Ga0059261_2429	0.74	+0.0
2,521,032	-		Ga0059261_2429	0.74	+1.9
2,521,161	-				+2.0
2,521,195	+				+1.9
2,521,195	+				-0.6
2,521,195	+				-0.6
2,521,195	+				-0.8
2,521,195	+				-2.8
2,521,195	+				+5.2
2,521,196	-				-0.3
2,521,196	-				+2.6
2,521,196	-				+0.0
2,521,196	-				+0.5
2,521,196	-				+2.2
2,521,196	-				-1.4
2,521,196	-				-0.8
2,521,196	-				+3.2
2,521,197	-				-0.8
2,521,206	+				-0.6