Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2069

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
2,167,803	+		Ga0059261_2067	0.74	+1.3
2,167,804	-		Ga0059261_2067	0.74	-0.5
2,168,040	+				+1.3
2,168,040	+				+1.2
2,168,040	+				-0.4
2,168,040	+				+1.6
2,168,040	+				+0.1
2,168,041	-				-1.7
2,168,041	-				-0.2
2,168,041	-				+0.4
2,168,041	-				-0.7
2,168,175	+				-0.2
2,168,175	+				+0.7
2,168,175	+				+0.1
2,168,175	+				+0.8
2,168,176	-				-0.2
2,168,176	-				-1.3
2,168,360	+		Ga0059261_2068	0.52	-0.5
2,168,360	+		Ga0059261_2068	0.52	+0.2
2,168,360	+		Ga0059261_2068	0.52	-1.5
2,168,360	+		Ga0059261_2068	0.52	+0.3
2,168,360	+		Ga0059261_2068	0.52	+0.7
2,168,360	+		Ga0059261_2068	0.52	+1.5
2,168,361	-		Ga0059261_2068	0.53	+0.1
2,168,361	-		Ga0059261_2068	0.53	+0.5
2,168,514	+		Ga0059261_2068	0.88	+1.1
2,168,514	+		Ga0059261_2068	0.88	-0.5
2,168,641	+				-0.5
2,168,641	+				-0.4
2,168,641	+				-1.6
2,168,641	+				-0.5
2,168,641	+				+1.8
2,168,641	+				-0.3
2,168,641	+				-1.0
2,168,642	-				-0.1
2,168,642	-				-0.8
2,168,642	-				+0.8
2,168,642	-				-2.7
2,168,642	-				-1.0
2,168,654	+				-1.0
2,168,654	+				+0.5
2,168,654	+				-0.0
2,168,654	+				+1.3
2,168,655	-				-0.2
2,168,656	+				+0.7
2,168,656	+				-1.6
2,168,656	+				+1.1
2,168,656	+				-0.1
2,168,656	+				+1.6
2,168,656	+				-0.6
2,168,656	+				+0.0
2,168,656	+				+0.5
2,168,657	-				+0.7
2,168,657	-				+1.0
2,168,657	-				-1.5
2,168,657	-				-1.2
2,168,657	-				-0.2
2,168,657	-				-0.9
2,168,657	-				-0.2
2,168,657	-				+0.1
2,168,657	-				+0.2
2,168,657	-				+0.5
2,168,657	-				-1.2
2,168,657	-				-0.5
2,168,755	+		Ga0059261_2069	0.13	+0.2
2,168,755	+		Ga0059261_2069	0.13	+0.1
2,168,755	+		Ga0059261_2069	0.13	+0.3
2,168,755	+		Ga0059261_2069	0.13	-2.4
2,168,755	+		Ga0059261_2069	0.13	-2.4
2,168,755	+		Ga0059261_2069	0.13	+0.4
2,168,755	+		Ga0059261_2069	0.13	+1.2
2,168,755	+		Ga0059261_2069	0.13	-0.4
2,168,755	+		Ga0059261_2069	0.13	-1.5
2,168,756	-		Ga0059261_2069	0.13	-0.2
2,168,756	-		Ga0059261_2069	0.13	+0.3
2,168,756	-		Ga0059261_2069	0.13	-2.6
2,168,756	-		Ga0059261_2069	0.13	-1.0
2,168,756	-		Ga0059261_2069	0.13	-1.6
2,168,756	-		Ga0059261_2069	0.13	-0.5
2,168,756	-		Ga0059261_2069	0.13	+4.3
2,168,756	-		Ga0059261_2069	0.13	-0.2
2,168,860	+		Ga0059261_2069	0.21	+2.5
2,168,860	+		Ga0059261_2069	0.21	-1.9
2,168,897	+		Ga0059261_2069	0.24	+1.5
2,168,897	+		Ga0059261_2069	0.24	-0.9
2,168,897	+		Ga0059261_2069	0.24	+0.5
2,168,897	+		Ga0059261_2069	0.24	-2.3
2,168,898	-		Ga0059261_2069	0.24	+2.5
2,168,898	-		Ga0059261_2069	0.24	-0.3
2,168,898	-		Ga0059261_2069	0.24	-0.0
2,168,898	-		Ga0059261_2069	0.24	-2.0
2,168,898	-		Ga0059261_2069	0.24	+0.9
2,168,898	-		Ga0059261_2069	0.24	-0.7
2,168,898	-		Ga0059261_2069	0.24	+0.9
2,168,898	-		Ga0059261_2069	0.24	-0.3
2,168,969	+		Ga0059261_2069	0.29	-0.8
2,168,971	+		Ga0059261_2069	0.30	-1.1
2,168,971	+		Ga0059261_2069	0.30	+0.4
2,168,971	+		Ga0059261_2069	0.30	-0.3
2,168,971	+		Ga0059261_2069	0.30	+0.3
2,168,972	-		Ga0059261_2069	0.30	-2.0
2,168,972	-		Ga0059261_2069	0.30	+0.3
2,168,972	-		Ga0059261_2069	0.30	+0.3
2,168,972	-		Ga0059261_2069	0.30	-0.4
2,168,972	-		Ga0059261_2069	0.30	-0.7
2,168,972	-		Ga0059261_2069	0.30	+1.5
2,169,483	+		Ga0059261_2069	0.68	-0.0
2,169,483	+		Ga0059261_2069	0.68	+1.3
2,169,484	-		Ga0059261_2069	0.68	-1.0
2,169,588	+		Ga0059261_2069	0.76	+0.3
2,169,588	+		Ga0059261_2069	0.76	-0.4
2,169,589	-		Ga0059261_2069	0.76	-1.2
2,169,589	-		Ga0059261_2069	0.76	-0.3
2,169,814	+				+0.0
2,169,814	+				-1.6
2,169,814	+				+0.2
2,169,814	+				+1.6
2,169,814	+				+0.3
2,169,814	+				-0.4
2,169,814	+				-0.9
2,169,815	-				+0.7
2,169,815	-				+2.6
2,169,815	-				+1.3
2,169,815	-				-2.6
2,169,880	+				+1.0
2,169,880	+				-1.3
2,169,881	-				-1.2
2,169,900	-				+0.9
2,169,900	-				+0.5
2,169,900	-				+4.0
2,169,901	+				+0.7
2,169,901	+				+0.8
2,169,901	+				+2.0
2,169,901	+				+2.2
2,169,901	+				+0.4
2,169,901	+				+0.1
2,169,901	+				-0.6
2,169,901	+				-0.5
2,169,901	+				+0.1
2,169,901	+				+0.4
2,169,901	+				-0.0
2,169,901	+				-0.4
2,169,901	+				-0.2
2,169,901	+				-1.3
2,169,901	+				+0.4
2,169,901	+				-1.2
2,169,901	+				+0.3
2,169,901	+				-0.0
2,169,902	-				+0.2
2,169,902	-				-0.3
2,169,902	-				-0.4
2,169,902	-				-1.5
2,169,902	-				-0.9
2,169,902	-				+2.6
2,169,902	-				-1.2
2,169,902	-				-1.3
2,169,902	-				+1.1
2,169,902	-				+0.7
2,169,902	-				-1.2
2,169,902	-				+1.2
2,169,902	-				-0.6
2,169,902	-				+0.7
2,169,902	-				-0.4
2,170,037	+		Ga0059261_2070	0.17	-2.5
2,170,037	+		Ga0059261_2070	0.17	-1.2
2,170,037	+		Ga0059261_2070	0.17	+1.3
2,170,037	+		Ga0059261_2070	0.17	-0.1
2,170,037	+		Ga0059261_2070	0.17	+0.2
2,170,037	+		Ga0059261_2070	0.17	+1.6
2,170,037	+		Ga0059261_2070	0.17	-1.3
2,170,037	+		Ga0059261_2070	0.17	-2.2
2,170,037	+		Ga0059261_2070	0.17	-0.6
2,170,037	+		Ga0059261_2070	0.17	-0.1
2,170,037	+		Ga0059261_2070	0.17	+0.4
2,170,037	+		Ga0059261_2070	0.17	-0.7
2,170,037	+		Ga0059261_2070	0.17	+4.0
2,170,037	+		Ga0059261_2070	0.17	+2.3
2,170,038	-		Ga0059261_2070	0.17	+1.7
2,170,038	-		Ga0059261_2070	0.17	+1.5
2,170,038	-		Ga0059261_2070	0.17	+0.2
2,170,038	-		Ga0059261_2070	0.17	-1.7
2,170,370	-		Ga0059261_2070	0.63	-0.9
2,170,634	+				-2.2
2,170,634	+				-0.1
2,170,634	+				+0.1
2,170,634	+				+0.7
2,170,634	+				+0.0
2,170,634	+				+0.9
2,170,634	+				-1.0
2,170,634	+				-0.0
2,170,634	+				+2.1
2,170,634	+				-0.9
2,170,635	-				+0.7
2,170,635	-				-0.9
2,170,635	-				+2.6
2,170,635	-				-0.1
2,170,635	-				-0.2
2,170,635	-				+0.9
2,170,635	-				+0.4
2,170,635	-				-0.5
2,170,890	+		Ga0059261_2071	0.26	-1.7
2,170,890	+		Ga0059261_2071	0.26	-0.0
2,170,890	+		Ga0059261_2071	0.26	-0.5
2,170,890	+		Ga0059261_2071	0.26	+0.9