Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1656

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
1,747,998	+		Ga0059261_1655	0.20	-0.3
1,747,998	+		Ga0059261_1655	0.20	-0.8
1,748,121	+		Ga0059261_1655	0.31	+1.1
1,748,121	+		Ga0059261_1655	0.31	+0.4
1,748,121	+		Ga0059261_1655	0.31	-0.1
1,748,121	+		Ga0059261_1655	0.31	-1.0
1,748,121	+		Ga0059261_1655	0.31	+2.0
1,748,121	+		Ga0059261_1655	0.31	+1.7
1,748,121	+		Ga0059261_1655	0.31	+1.4
1,748,121	+		Ga0059261_1655	0.31	-0.8
1,748,121	+		Ga0059261_1655	0.31	+1.1
1,748,121	+		Ga0059261_1655	0.31	+0.9
1,748,121	+		Ga0059261_1655	0.31	-0.5
1,748,121	+		Ga0059261_1655	0.31	+0.5
1,748,121	+		Ga0059261_1655	0.31	-1.7
1,748,122	-		Ga0059261_1655	0.31	-2.0
1,748,122	-		Ga0059261_1655	0.31	+0.3
1,748,122	-		Ga0059261_1655	0.31	-1.0
1,748,122	-		Ga0059261_1655	0.31	+1.2
1,748,122	-		Ga0059261_1655	0.31	+1.2
1,748,122	-		Ga0059261_1655	0.31	-1.3
1,748,122	-		Ga0059261_1655	0.31	+3.0
1,748,122	-		Ga0059261_1655	0.31	-0.1
1,748,122	-		Ga0059261_1655	0.31	+0.5
1,748,122	-		Ga0059261_1655	0.31	-1.2
1,748,122	-		Ga0059261_1655	0.31	+0.1
1,748,122	-		Ga0059261_1655	0.31	+2.1
1,748,122	-		Ga0059261_1655	0.31	+0.6
1,748,122	-		Ga0059261_1655	0.31	+2.4
1,748,122	-		Ga0059261_1655	0.31	-1.7
1,748,122	-		Ga0059261_1655	0.31	+3.3
1,748,157	+		Ga0059261_1655	0.35	-1.7
1,748,298	+		Ga0059261_1655	0.47	-1.8
1,748,298	+		Ga0059261_1655	0.47	-0.1
1,748,298	+		Ga0059261_1655	0.47	+0.6
1,748,298	+		Ga0059261_1655	0.47	-1.3
1,748,298	+		Ga0059261_1655	0.47	+0.9
1,748,299	-		Ga0059261_1655	0.47	+0.5
1,748,307	+		Ga0059261_1655	0.48	-0.0
1,748,307	+		Ga0059261_1655	0.48	-0.4
1,748,307	+		Ga0059261_1655	0.48	+1.5
1,748,307	+		Ga0059261_1655	0.48	-1.2
1,748,307	+		Ga0059261_1655	0.48	+0.4
1,748,307	+		Ga0059261_1655	0.48	-0.2
1,748,307	+		Ga0059261_1655	0.48	+1.6
1,748,307	+		Ga0059261_1655	0.48	-2.0
1,748,307	+		Ga0059261_1655	0.48	+2.6
1,748,307	+		Ga0059261_1655	0.48	-1.7
1,748,308	-				+0.2
1,748,308	-		Ga0059261_1655	0.48	-0.0
1,748,308	-		Ga0059261_1655	0.48	-0.2
1,748,308	-		Ga0059261_1655	0.48	+0.1
1,748,308	-		Ga0059261_1655	0.48	-0.5
1,748,308	-		Ga0059261_1655	0.48	-1.2
1,748,308	-		Ga0059261_1655	0.48	+0.2
1,748,308	-		Ga0059261_1655	0.48	-2.2
1,748,308	-		Ga0059261_1655	0.48	-1.5
1,748,308	-		Ga0059261_1655	0.48	-0.8
1,748,308	-		Ga0059261_1655	0.48	+2.9
1,748,308	-		Ga0059261_1655	0.48	-1.6
1,748,308	-		Ga0059261_1655	0.48	+0.8
1,748,308	-		Ga0059261_1655	0.48	-0.9
1,748,308	-		Ga0059261_1655	0.48	-0.2
1,748,308	-		Ga0059261_1655	0.48	+0.2
1,748,412	+		Ga0059261_1655	0.58	+1.9
1,748,412	+		Ga0059261_1655	0.58	+1.5
1,748,412	+		Ga0059261_1655	0.58	-1.1
1,748,413	-		Ga0059261_1655	0.58	-0.3
1,748,413	-		Ga0059261_1655	0.58	+0.2
1,748,413	-		Ga0059261_1655	0.58	-1.4
1,748,413	-		Ga0059261_1655	0.58	+0.1
1,748,421	+		Ga0059261_1655	0.58	+1.4
1,748,421	+		Ga0059261_1655	0.58	+2.6
1,748,421	+		Ga0059261_1655	0.58	+0.9
1,748,421	+		Ga0059261_1655	0.58	-1.6
1,748,421	+		Ga0059261_1655	0.58	-1.0
1,748,422	-		Ga0059261_1655	0.58	+0.0
1,748,439	+		Ga0059261_1655	0.60	-2.0
1,748,439	+		Ga0059261_1655	0.60	-0.2
1,748,439	+		Ga0059261_1655	0.60	-1.0
1,748,439	+		Ga0059261_1655	0.60	+0.7
1,748,439	+		Ga0059261_1655	0.60	-0.3
1,748,439	+		Ga0059261_1655	0.60	-1.2
1,748,439	+		Ga0059261_1655	0.60	+0.5
1,748,439	+		Ga0059261_1655	0.60	+1.5
1,748,439	+		Ga0059261_1655	0.60	+2.2
1,748,439	+		Ga0059261_1655	0.60	+0.6
1,748,439	+		Ga0059261_1655	0.60	-1.1
1,748,440	-		Ga0059261_1655	0.60	+0.6
1,748,440	-		Ga0059261_1655	0.60	-1.2
1,748,440	-		Ga0059261_1655	0.60	-0.5
1,748,440	-		Ga0059261_1655	0.60	-0.7
1,748,440	-		Ga0059261_1655	0.60	-0.4
1,748,440	-		Ga0059261_1655	0.60	+2.2
1,748,440	-		Ga0059261_1655	0.60	-1.0
1,748,440	-		Ga0059261_1655	0.60	-0.5
1,748,440	-		Ga0059261_1655	0.60	-0.4
1,748,604	+		Ga0059261_1655	0.75	+0.5
1,748,604	+		Ga0059261_1655	0.75	+0.0
1,748,604	+		Ga0059261_1655	0.75	-0.0
1,748,604	+		Ga0059261_1655	0.75	-1.0
1,748,605	-		Ga0059261_1655	0.75	-1.6
1,748,605	-		Ga0059261_1655	0.75	-0.1
1,748,605	-		Ga0059261_1655	0.75	+1.6
1,748,605	-		Ga0059261_1655	0.75	-0.0
1,748,605	-		Ga0059261_1655	0.75	+0.5
1,748,605	-		Ga0059261_1655	0.75	-0.4
1,748,661	+		Ga0059261_1655	0.80	+4.7
1,748,661	+		Ga0059261_1655	0.80	-0.2
1,748,661	+		Ga0059261_1655	0.80	-0.8
1,748,661	+		Ga0059261_1655	0.80	-0.5
1,748,662	-		Ga0059261_1655	0.80	-0.4
1,748,662	-		Ga0059261_1655	0.80	-1.5
1,748,662	-		Ga0059261_1655	0.80	+0.7
1,748,662	-		Ga0059261_1655	0.80	-0.4
1,748,662	-		Ga0059261_1655	0.80	-0.0
1,748,662	-		Ga0059261_1655	0.80	-0.2
1,748,682	+		Ga0059261_1655	0.82	+2.2
1,748,682	+		Ga0059261_1655	0.82	+1.4
1,748,682	+		Ga0059261_1655	0.82	+0.1
1,748,683	-		Ga0059261_1655	0.82	-1.1
1,748,767	+		Ga0059261_1655	0.90	-1.3
1,748,768	-		Ga0059261_1655	0.90	-0.9
1,748,805	+				-0.8
1,748,854	-				-0.1
1,748,854	-				-1.6
1,748,918	+				+0.2
1,748,918	+				+0.6
1,748,964	-				-0.1
1,748,965	+				+2.3
1,748,965	+				+0.0
1,748,965	+				+1.0
1,748,965	+				+0.1
1,748,965	+				-0.5
1,748,965	+				+2.2
1,748,965	+				+0.3
1,748,966	-				-0.7
1,748,966	-				-0.7
1,748,966	-				+1.2
1,748,966	-				-1.8
1,748,966	-				-1.0
1,748,966	-				-1.9
1,749,041	+				+3.1
1,749,041	+				-0.6
1,749,041	+				+1.4
1,749,041	+				+1.9
1,749,041	+				+3.8
1,749,041	+				+0.8
1,749,041	+				+1.9
1,749,041	+				+1.3
1,749,041	+				-1.2
1,749,041	+				+0.1
1,749,041	+				+3.2
1,749,042	-				+0.5
1,749,042	-				+0.4
1,749,042	-				-0.5
1,749,042	-				+0.5
1,749,042	-				+0.9
1,749,042	-				-0.6
1,749,042	-				+0.2
1,749,042	-				-0.8
1,749,042	-				+1.2
1,749,042	-				+1.8
1,749,042	-				-1.9
1,749,048	+				-0.7
1,749,048	+				+0.8
1,749,048	+				+2.2
1,749,048	+				-1.9
1,749,048	+				+0.3
1,749,049	-				+3.1
1,749,049	-				+0.5
1,749,049	-				+0.2
1,749,049	-				+2.9
1,749,049	-				-0.1
1,749,050	+				+1.3
1,749,050	+				-0.3
1,749,050	+				+0.3
1,749,050	+				-0.7
1,749,050	+				-0.3
1,749,051	-				+0.7
1,749,051	-				-0.9
1,749,051	-				+0.0
1,749,218	+		Ga0059261_1656	0.15	+1.2
1,749,227	+		Ga0059261_1656	0.15	+0.3
1,749,227	+		Ga0059261_1656	0.15	-0.3
1,749,227	+		Ga0059261_1656	0.15	+1.2
1,749,227	+		Ga0059261_1656	0.15	+1.5
1,749,227	+		Ga0059261_1656	0.15	+0.4
1,749,227	+		Ga0059261_1656	0.15	-1.0
1,749,227	+		Ga0059261_1656	0.15	-0.3
1,749,227	+		Ga0059261_1656	0.15	-0.4
1,749,227	+		Ga0059261_1656	0.15	-0.8
1,749,227	+		Ga0059261_1656	0.15	-0.1
1,749,228	-				+1.2
1,749,228	-		Ga0059261_1656	0.15	-0.8
1,749,228	-		Ga0059261_1656	0.15	+0.5
1,749,228	-				+1.2
1,749,228	-		Ga0059261_1656	0.15	-0.2
1,749,228	-		Ga0059261_1656	0.15	+0.3
1,749,344	+		Ga0059261_1656	0.20	-1.9
1,749,344	+		Ga0059261_1656	0.20	-2.2
1,749,344	+		Ga0059261_1656	0.20	-0.4
1,749,345	-		Ga0059261_1656	0.20	-0.6
1,749,345	-		Ga0059261_1656	0.20	+0.1
1,749,345	-		Ga0059261_1656	0.20	-0.0
1,749,380	+		Ga0059261_1656	0.22	-1.0
1,749,381	-		Ga0059261_1656	0.22	-0.2
1,749,641	+		Ga0059261_1656	0.33	+1.2
1,749,641	+		Ga0059261_1656	0.33	-0.1
1,749,642	-		Ga0059261_1656	0.33	-2.0
1,749,642	-		Ga0059261_1656	0.33	+1.0
1,749,668	+				+1.2
1,749,668	+		Ga0059261_1656	0.34	-1.4
1,749,668	+		Ga0059261_1656	0.34	-0.6
1,749,668	+		Ga0059261_1656	0.34	-0.0
1,749,669	-		Ga0059261_1656	0.34	-1.5
1,749,669	-		Ga0059261_1656	0.34	-2.2
1,749,669	-		Ga0059261_1656	0.34	-2.2
1,749,669	-		Ga0059261_1656	0.34	+1.7
1,749,669	-		Ga0059261_1656	0.34	+0.1
1,749,669	-		Ga0059261_1656	0.34	-0.4
1,749,669	-		Ga0059261_1656	0.34	-1.0
1,749,669	-		Ga0059261_1656	0.34	+1.5
1,749,669	-		Ga0059261_1656	0.34	-1.0
1,749,725	+		Ga0059261_1656	0.37	+0.9
1,749,725	+		Ga0059261_1656	0.37	-0.5
1,749,726	-		Ga0059261_1656	0.37	-0.1
1,749,726	-		Ga0059261_1656	0.37	+2.2
1,749,726	-		Ga0059261_1656	0.37	-0.4
1,749,726	-		Ga0059261_1656	0.37	-0.8
1,749,746	+		Ga0059261_1656	0.38	+2.6
1,749,746	+		Ga0059261_1656	0.38	+0.5
1,749,746	+		Ga0059261_1656	0.38	+1.4
1,749,746	+		Ga0059261_1656	0.38	-0.4
1,749,746	+		Ga0059261_1656	0.38	-1.9
1,749,747	-		Ga0059261_1656	0.38	+0.9
1,749,747	-		Ga0059261_1656	0.38	-2.3
1,749,747	-		Ga0059261_1656	0.38	-0.4
1,749,747	-		Ga0059261_1656	0.38	-0.4
1,749,747	-		Ga0059261_1656	0.38	+0.5
1,749,747	-		Ga0059261_1656	0.38	+0.6
1,749,747	-		Ga0059261_1656	0.38	-0.6
1,749,762	+		Ga0059261_1656	0.38	+0.9
1,749,762	+		Ga0059261_1656	0.38	+0.6
1,749,762	+		Ga0059261_1656	0.38	+1.2
1,749,762	+		Ga0059261_1656	0.38	-1.1
1,749,762	+		Ga0059261_1656	0.38	+1.5
1,749,763	-		Ga0059261_1656	0.38	-0.2
1,749,763	-		Ga0059261_1656	0.38	-0.6
1,749,763	-				+0.2
1,749,763	-		Ga0059261_1656	0.38	+0.6
1,749,763	-		Ga0059261_1656	0.38	-2.5
1,749,763	-		Ga0059261_1656	0.38	+3.0
1,749,764	+		Ga0059261_1656	0.38	+1.5
1,749,764	+		Ga0059261_1656	0.38	+0.3
1,749,764	+		Ga0059261_1656	0.38	-2.0
1,749,764	+		Ga0059261_1656	0.38	-0.9
1,749,764	+		Ga0059261_1656	0.38	-0.6
1,749,765	-		Ga0059261_1656	0.38	-1.2
1,749,765	-		Ga0059261_1656	0.38	+1.2
1,749,765	-		Ga0059261_1656	0.38	+0.3
1,749,765	-				+0.2
1,749,765	-		Ga0059261_1656	0.38	-1.7
1,749,776	+		Ga0059261_1656	0.39	-0.4
1,749,776	+		Ga0059261_1656	0.39	-1.4
1,749,776	+		Ga0059261_1656	0.39	+1.2
1,749,777	-		Ga0059261_1656	0.39	+0.6
1,749,777	-		Ga0059261_1656	0.39	+0.0
1,749,785	-		Ga0059261_1656	0.39	-1.2
1,749,785	-		Ga0059261_1656	0.39	+0.6
1,749,785	-				-0.8
1,749,785	-		Ga0059261_1656	0.39	-0.5
1,749,926	+		Ga0059261_1656	0.45	-1.0
1,749,927	-		Ga0059261_1656	0.46	-0.9
1,749,927	-		Ga0059261_1656	0.46	-0.4
1,749,927	-		Ga0059261_1656	0.46	-0.7
1,750,235	+		Ga0059261_1656	0.59	+0.6
1,750,235	+		Ga0059261_1656	0.59	-0.8
1,750,235	+		Ga0059261_1656	0.59	+0.9
1,750,235	+		Ga0059261_1656	0.59	-2.0
1,750,235	+		Ga0059261_1656	0.59	-2.3
1,750,235	+		Ga0059261_1656	0.59	+1.0
1,750,236	-		Ga0059261_1656	0.59	+0.6
1,750,236	-		Ga0059261_1656	0.59	+2.5
1,750,236	-		Ga0059261_1656	0.59	+2.8
1,750,236	-		Ga0059261_1656	0.59	-0.5
1,750,236	-		Ga0059261_1656	0.59	+0.3
1,750,236	-		Ga0059261_1656	0.59	-1.7
1,750,236	-		Ga0059261_1656	0.59	-0.4
1,750,236	-		Ga0059261_1656	0.59	-1.0
1,750,236	-		Ga0059261_1656	0.59	+1.1
1,750,325	+		Ga0059261_1656	0.63	-1.0
1,750,325	+		Ga0059261_1656	0.63	+1.2
1,750,326	-				+0.2
1,750,427	+		Ga0059261_1656	0.67	+0.0
1,750,427	+		Ga0059261_1656	0.67	-1.4
1,750,427	+		Ga0059261_1656	0.67	-1.1
1,750,428	-		Ga0059261_1656	0.67	-0.1
1,750,428	-		Ga0059261_1656	0.67	-0.2
1,750,428	-		Ga0059261_1656	0.67	-0.5
1,750,428	-		Ga0059261_1656	0.67	-0.8
1,750,508	+		Ga0059261_1656	0.71	-0.5
1,750,509	-		Ga0059261_1656	0.71	-0.4
1,750,509	-		Ga0059261_1656	0.71	-0.2
1,750,509	-		Ga0059261_1656	0.71	-0.7
1,750,598	+		Ga0059261_1656	0.75	+3.1
1,750,598	+		Ga0059261_1656	0.75	+1.5
1,750,598	+		Ga0059261_1656	0.75	+0.3
1,750,658	+		Ga0059261_1656	0.77	-0.2
1,750,658	+		Ga0059261_1656	0.77	+0.4
1,750,659	-		Ga0059261_1656	0.77	+0.2
1,750,659	-		Ga0059261_1656	0.77	-0.6
1,750,748	+		Ga0059261_1656	0.81	-0.4
1,750,748	+		Ga0059261_1656	0.81	-1.5
1,750,748	+		Ga0059261_1656	0.81	-0.2
1,750,748	+		Ga0059261_1656	0.81	-2.0
1,750,748	+		Ga0059261_1656	0.81	-0.5
1,750,749	-		Ga0059261_1656	0.81	-0.7
1,750,749	-		Ga0059261_1656	0.81	+0.8
1,750,805	-				+0.6
1,750,809	+		Ga0059261_1656	0.84	-1.2
1,750,809	+		Ga0059261_1656	0.84	-0.4
1,750,809	+		Ga0059261_1656	0.84	-1.5
1,750,810	-		Ga0059261_1656	0.84	+0.6
1,750,810	-		Ga0059261_1656	0.84	+0.8
1,750,810	-		Ga0059261_1656	0.84	+0.3
1,750,853	+		Ga0059261_1656	0.86	+2.2
1,750,854	-		Ga0059261_1656	0.86	+2.3
1,750,854	-		Ga0059261_1656	0.86	+0.8
1,750,854	-		Ga0059261_1656	0.86	-1.0
1,750,854	-		Ga0059261_1656	0.86	+0.1
1,750,854	-		Ga0059261_1656	0.86	+0.0
1,750,854	-		Ga0059261_1656	0.86	-0.8
1,750,854	-		Ga0059261_1656	0.86	-1.1
1,750,949	+		Ga0059261_1656	0.90	-0.8
1,750,949	+		Ga0059261_1656	0.90	+1.6
1,750,950	-		Ga0059261_1656	0.90	-0.2
1,750,950	-		Ga0059261_1656	0.90	-0.7
1,751,182	+				+1.5
1,751,182	+				+1.0
1,751,182	+				+1.8
1,751,182	+				+2.5
1,751,183	-				+0.3
1,751,183	-				+0.0
1,751,183	-				-2.2
1,751,200	+				-0.0
1,751,200	+				-1.8
1,751,200	+				-1.0
1,751,200	+				+0.4
1,751,200	+				-1.1
1,751,201	-				-1.7
1,751,201	-				-1.2
1,751,201	-				-0.8
1,751,201	-				+0.1
1,751,209	+				+0.2
1,751,249	+				+1.8
1,751,249	+				+0.6
1,751,250	-				+1.4
1,751,375	+		Ga0059261_1657	0.19	+1.0
1,751,375	+		Ga0059261_1657	0.19	-1.1
1,751,375	+		Ga0059261_1657	0.19	+2.1
1,751,376	-		Ga0059261_1657	0.19	-2.4
1,751,376	-		Ga0059261_1657	0.19	-0.3
1,751,434	+		Ga0059261_1657	0.24	-0.7
1,751,612	+		Ga0059261_1657	0.42	-2.3
1,751,612	+		Ga0059261_1657	0.42	+2.4
1,751,659	+		Ga0059261_1657	0.46	-0.2
1,751,659	+		Ga0059261_1657	0.46	-0.4
1,751,659	+		Ga0059261_1657	0.46	+1.1
1,751,659	+		Ga0059261_1657	0.46	-1.1
1,751,660	-		Ga0059261_1657	0.46	-2.7
1,751,660	-		Ga0059261_1657	0.46	+1.3
1,751,660	-		Ga0059261_1657	0.46	+0.9
1,751,660	-		Ga0059261_1657	0.46	+2.2
1,751,660	-		Ga0059261_1657	0.46	+1.0
1,751,777	+		Ga0059261_1657	0.58	+0.1
1,751,777	+		Ga0059261_1657	0.58	-0.2
1,751,777	+		Ga0059261_1657	0.58	+1.2
1,752,007	+		Ga0059261_1657	0.80	-0.4
1,752,007	+		Ga0059261_1657	0.80	+0.9
1,752,007	+		Ga0059261_1657	0.80	-0.1
1,752,008	-		Ga0059261_1657	0.80	-0.2
1,752,008	-		Ga0059261_1657	0.80	+0.3
1,752,033	+		Ga0059261_1657	0.82	-0.9
1,752,033	+		Ga0059261_1657	0.82	-1.4