Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26240 and AO356_26245 overlap by 4 nucleotides AO356_26245 and AO356_26250 are separated by 150 nucleotides AO356_26250 and AO356_26255 are separated by 32 nucleotides AO356_26255 and AO356_26260 overlap by 4 nucleotides
AO356_26240: AO356_26240 - protein TolR, at 5,944,974 to 5,945,420
_26240
AO356_26245: AO356_26245 - energy transducer TonB, at 5,945,417 to 5,946,238
_26245
AO356_26250: AO356_26250 - AraC family transcriptional regulator, at 5,946,389 to 5,947,282
_26250
AO356_26255: AO356_26255 - chemotaxis protein CheY, at 5,947,315 to 5,947,782
_26255
AO356_26260: AO356_26260 - histidine kinase, at 5,947,779 to 5,950,091
_26260
Position (kb) 5946
5947
5948 Strain fitness (log2 ratio) -2
-1
0
1 at 5945.596 kb on + strand, within AO356_26245 at 5945.978 kb on + strand, within AO356_26245 at 5946.060 kb on - strand, within AO356_26245 at 5946.214 kb on + strand at 5946.214 kb on + strand at 5946.241 kb on - strand at 5946.434 kb on + strand at 5946.550 kb on - strand, within AO356_26250 at 5946.550 kb on - strand, within AO356_26250 at 5946.550 kb on - strand, within AO356_26250 at 5946.744 kb on + strand, within AO356_26250 at 5946.745 kb on - strand, within AO356_26250 at 5946.745 kb on - strand, within AO356_26250 at 5946.948 kb on + strand, within AO356_26250 at 5946.948 kb on + strand, within AO356_26250 at 5947.393 kb on - strand, within AO356_26255 at 5947.394 kb on + strand, within AO356_26255 at 5947.394 kb on + strand, within AO356_26255 at 5947.395 kb on - strand, within AO356_26255 at 5947.395 kb on - strand, within AO356_26255 at 5947.545 kb on - strand, within AO356_26255 at 5947.662 kb on + strand, within AO356_26255 at 5947.662 kb on + strand, within AO356_26255 at 5947.663 kb on - strand, within AO356_26255 at 5947.688 kb on - strand, within AO356_26255 at 5947.798 kb on + strand at 5947.799 kb on - strand at 5947.799 kb on - strand at 5947.835 kb on + strand at 5947.836 kb on - strand at 5948.155 kb on + strand, within AO356_26260 at 5948.155 kb on + strand, within AO356_26260
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 5,945,596 + AO356_26245 0.22 +0.2 5,945,978 + AO356_26245 0.68 +0.0 5,946,060 - AO356_26245 0.78 -0.1 5,946,214 + +0.6 5,946,214 + -0.4 5,946,241 - -1.1 5,946,434 + +0.8 5,946,550 - AO356_26250 0.18 +0.5 5,946,550 - AO356_26250 0.18 -0.1 5,946,550 - AO356_26250 0.18 +0.1 5,946,744 + AO356_26250 0.40 -0.3 5,946,745 - AO356_26250 0.40 +0.3 5,946,745 - AO356_26250 0.40 +0.6 5,946,948 + AO356_26250 0.63 -0.1 5,946,948 + AO356_26250 0.63 +0.2 5,947,393 - AO356_26255 0.17 +0.2 5,947,394 + AO356_26255 0.17 -0.2 5,947,394 + AO356_26255 0.17 +0.1 5,947,395 - AO356_26255 0.17 -0.5 5,947,395 - AO356_26255 0.17 +0.6 5,947,545 - AO356_26255 0.49 +0.4 5,947,662 + AO356_26255 0.74 +0.9 5,947,662 + AO356_26255 0.74 +0.1 5,947,663 - AO356_26255 0.74 +1.1 5,947,688 - AO356_26255 0.80 -0.1 5,947,798 + +0.4 5,947,799 - +0.9 5,947,799 - +0.1 5,947,835 + -1.8 5,947,836 - +0.0 5,948,155 + AO356_26260 0.16 -2.4 5,948,155 + AO356_26260 0.16 -0.3
Or see this region's nucleotide sequence