Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22780 and AO356_22785 are separated by 30 nucleotides AO356_22785 and AO356_22790 are separated by 115 nucleotides AO356_22790 and AO356_22795 are separated by 234 nucleotides AO356_22795 and AO356_22800 are separated by 305 nucleotides
AO356_22780: AO356_22780 - hypothetical protein, at 5,085,555 to 5,085,785
_22780
AO356_22785: AO356_22785 - hypothetical protein, at 5,085,816 to 5,086,097
_22785
AO356_22790: AO356_22790 - hypothetical protein, at 5,086,213 to 5,086,425
_22790
AO356_22795: AO356_22795 - UTP--glucose-1-phosphate uridylyltransferase, at 5,086,660 to 5,087,499
_22795
AO356_22800: AO356_22800 - glutathione reductase, at 5,087,805 to 5,089,160
_22800
Position (kb)
5086
5087
5088 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5085.745 kb on + strand, within AO356_22780 at 5085.793 kb on + strand at 5085.802 kb on + strand at 5085.803 kb on - strand at 5085.817 kb on + strand at 5085.817 kb on + strand at 5085.817 kb on + strand at 5085.817 kb on + strand at 5085.818 kb on - strand at 5085.818 kb on - strand at 5085.821 kb on + strand at 5085.821 kb on + strand at 5085.822 kb on - strand at 5085.822 kb on - strand at 5085.961 kb on + strand, within AO356_22785 at 5085.961 kb on + strand, within AO356_22785 at 5085.961 kb on + strand, within AO356_22785 at 5085.961 kb on + strand, within AO356_22785 at 5085.961 kb on + strand, within AO356_22785 at 5086.030 kb on + strand, within AO356_22785 at 5086.030 kb on + strand, within AO356_22785 at 5086.138 kb on - strand at 5086.138 kb on - strand at 5086.162 kb on + strand at 5086.162 kb on + strand at 5086.163 kb on - strand at 5086.163 kb on - strand at 5086.163 kb on - strand at 5086.163 kb on - strand at 5086.195 kb on + strand at 5086.195 kb on + strand at 5086.195 kb on + strand at 5086.195 kb on + strand at 5086.195 kb on + strand at 5086.195 kb on + strand at 5086.196 kb on - strand at 5086.196 kb on - strand at 5086.196 kb on - strand at 5086.323 kb on + strand, within AO356_22790 at 5086.323 kb on + strand, within AO356_22790 at 5086.355 kb on + strand, within AO356_22790 at 5086.356 kb on - strand, within AO356_22790 at 5086.356 kb on - strand, within AO356_22790 at 5086.362 kb on + strand, within AO356_22790 at 5086.363 kb on - strand, within AO356_22790 at 5086.363 kb on - strand, within AO356_22790 at 5086.401 kb on - strand, within AO356_22790 at 5086.427 kb on + strand at 5086.428 kb on - strand at 5086.428 kb on - strand at 5086.428 kb on - strand at 5086.428 kb on - strand at 5086.428 kb on - strand at 5086.428 kb on - strand at 5086.428 kb on - strand at 5086.428 kb on - strand at 5086.464 kb on - strand at 5086.464 kb on - strand at 5086.497 kb on + strand at 5086.498 kb on - strand at 5086.541 kb on - strand at 5086.541 kb on - strand at 5086.541 kb on - strand at 5086.562 kb on + strand at 5086.562 kb on + strand at 5086.562 kb on + strand at 5086.595 kb on + strand at 5086.595 kb on + strand at 5086.595 kb on + strand at 5086.595 kb on + strand at 5086.595 kb on + strand at 5086.595 kb on + strand at 5086.595 kb on + strand at 5086.596 kb on - strand at 5086.596 kb on - strand at 5086.616 kb on - strand at 5086.634 kb on + strand at 5086.635 kb on - strand at 5086.657 kb on + strand at 5086.657 kb on + strand at 5086.659 kb on + strand at 5086.659 kb on + strand at 5086.659 kb on + strand at 5086.659 kb on + strand at 5086.659 kb on + strand at 5086.771 kb on + strand, within AO356_22795 at 5086.867 kb on + strand, within AO356_22795 at 5086.867 kb on + strand, within AO356_22795 at 5087.104 kb on + strand, within AO356_22795 at 5087.105 kb on - strand, within AO356_22795 at 5087.168 kb on - strand, within AO356_22795 at 5087.206 kb on + strand, within AO356_22795 at 5087.279 kb on - strand, within AO356_22795 at 5087.440 kb on + strand at 5087.440 kb on + strand at 5087.477 kb on - strand at 5087.477 kb on - strand at 5087.774 kb on + strand at 5087.774 kb on + strand at 5087.774 kb on + strand at 5087.775 kb on - strand at 5087.775 kb on - strand at 5087.775 kb on - strand at 5087.775 kb on - strand at 5087.799 kb on + strand at 5087.800 kb on - strand at 5087.826 kb on + strand at 5087.826 kb on + strand at 5087.826 kb on + strand at 5087.826 kb on + strand at 5087.826 kb on + strand at 5087.826 kb on + strand at 5087.826 kb on + strand at 5087.827 kb on - strand at 5087.827 kb on - strand at 5087.827 kb on - strand at 5087.827 kb on - strand at 5087.827 kb on - strand at 5087.827 kb on - strand at 5087.827 kb on - strand at 5087.967 kb on + strand, within AO356_22800 at 5087.967 kb on + strand, within AO356_22800 at 5087.967 kb on + strand, within AO356_22800 at 5087.968 kb on - strand, within AO356_22800 at 5087.968 kb on - strand, within AO356_22800 at 5087.968 kb on - strand, within AO356_22800 at 5087.968 kb on - strand, within AO356_22800 at 5087.979 kb on + strand, within AO356_22800 at 5088.096 kb on + strand, within AO356_22800 at 5088.096 kb on + strand, within AO356_22800 at 5088.203 kb on + strand, within AO356_22800 at 5088.331 kb on - strand, within AO356_22800 at 5088.331 kb on - strand, within AO356_22800 at 5088.331 kb on - strand, within AO356_22800 at 5088.331 kb on - strand, within AO356_22800
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 5,085,745 + AO356_22780 0.82 -0.7 5,085,793 + +0.9 5,085,802 + -1.4 5,085,803 - +0.5 5,085,817 + +0.7 5,085,817 + +2.3 5,085,817 + +1.1 5,085,817 + -0.2 5,085,818 - +0.9 5,085,818 - -1.9 5,085,821 + -0.0 5,085,821 + +1.4 5,085,822 - -0.5 5,085,822 - -0.6 5,085,961 + AO356_22785 0.51 -0.8 5,085,961 + AO356_22785 0.51 -0.1 5,085,961 + AO356_22785 0.51 +0.3 5,085,961 + AO356_22785 0.51 +0.1 5,085,961 + AO356_22785 0.51 +0.3 5,086,030 + AO356_22785 0.76 +1.2 5,086,030 + AO356_22785 0.76 +0.2 5,086,138 - -0.2 5,086,138 - -0.1 5,086,162 + -0.0 5,086,162 + +0.2 5,086,163 - -0.3 5,086,163 - -0.0 5,086,163 - +0.2 5,086,163 - +1.2 5,086,195 + -0.3 5,086,195 + +0.3 5,086,195 + +0.1 5,086,195 + -0.3 5,086,195 + +0.5 5,086,195 + +0.7 5,086,196 - -0.5 5,086,196 - +0.5 5,086,196 - -0.3 5,086,323 + AO356_22790 0.52 +0.5 5,086,323 + AO356_22790 0.52 +1.0 5,086,355 + AO356_22790 0.67 +0.1 5,086,356 - AO356_22790 0.67 -0.3 5,086,356 - AO356_22790 0.67 -0.4 5,086,362 + AO356_22790 0.70 -0.6 5,086,363 - AO356_22790 0.70 -0.9 5,086,363 - AO356_22790 0.70 +0.8 5,086,401 - AO356_22790 0.88 -0.3 5,086,427 + -0.6 5,086,428 - +0.0 5,086,428 - -0.3 5,086,428 - +0.1 5,086,428 - -1.0 5,086,428 - -0.3 5,086,428 - -0.3 5,086,428 - +0.7 5,086,428 - -0.1 5,086,464 - +0.8 5,086,464 - +0.0 5,086,497 + +0.1 5,086,498 - +0.5 5,086,541 - -0.7 5,086,541 - +1.1 5,086,541 - +0.2 5,086,562 + -0.1 5,086,562 + -0.6 5,086,562 + +0.4 5,086,595 + +0.2 5,086,595 + -0.2 5,086,595 + -0.4 5,086,595 + -0.5 5,086,595 + -0.2 5,086,595 + -0.0 5,086,595 + +0.7 5,086,596 - -0.1 5,086,596 - +0.6 5,086,616 - -0.6 5,086,634 + +2.0 5,086,635 - -0.1 5,086,657 + +1.1 5,086,657 + +0.5 5,086,659 + -0.8 5,086,659 + -1.0 5,086,659 + +0.5 5,086,659 + -1.6 5,086,659 + -1.0 5,086,771 + AO356_22795 0.13 -2.2 5,086,867 + AO356_22795 0.25 -0.1 5,086,867 + AO356_22795 0.25 -2.6 5,087,104 + AO356_22795 0.53 -2.9 5,087,105 - AO356_22795 0.53 +0.9 5,087,168 - AO356_22795 0.60 +1.0 5,087,206 + AO356_22795 0.65 -1.6 5,087,279 - AO356_22795 0.74 -2.4 5,087,440 + -1.3 5,087,440 + -1.6 5,087,477 - -0.4 5,087,477 - +1.0 5,087,774 + +0.2 5,087,774 + -0.4 5,087,774 + -0.9 5,087,775 - +2.0 5,087,775 - -1.3 5,087,775 - -0.7 5,087,775 - -0.9 5,087,799 + +0.4 5,087,800 - +0.2 5,087,826 + +0.7 5,087,826 + -0.0 5,087,826 + +0.4 5,087,826 + +0.1 5,087,826 + +1.0 5,087,826 + +0.4 5,087,826 + -0.4 5,087,827 - +0.5 5,087,827 - +0.7 5,087,827 - +0.7 5,087,827 - +0.9 5,087,827 - +0.3 5,087,827 - +0.4 5,087,827 - -0.3 5,087,967 + AO356_22800 0.12 +1.0 5,087,967 + AO356_22800 0.12 +0.1 5,087,967 + AO356_22800 0.12 +0.1 5,087,968 - AO356_22800 0.12 +0.1 5,087,968 - AO356_22800 0.12 +0.1 5,087,968 - AO356_22800 0.12 -0.4 5,087,968 - AO356_22800 0.12 -0.3 5,087,979 + AO356_22800 0.13 +0.5 5,088,096 + AO356_22800 0.21 -0.3 5,088,096 + AO356_22800 0.21 +0.7 5,088,203 + AO356_22800 0.29 +0.4 5,088,331 - AO356_22800 0.39 +0.2 5,088,331 - AO356_22800 0.39 +0.1 5,088,331 - AO356_22800 0.39 +0.1 5,088,331 - AO356_22800 0.39 +0.6
Or see this region's nucleotide sequence