Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21815 and AO356_21820 overlap by 4 nucleotides AO356_21820 and AO356_21825 are separated by 324 nucleotides
AO356_21815: AO356_21815 - DNA repair nucleotidyltransferase, at 4,881,111 to 4,882,532
_21815
AO356_21820: AO356_21820 - DNA polymerase, at 4,882,529 to 4,885,606
_21820
AO356_21825: AO356_21825 - histidine kinase, at 4,885,931 to 4,887,994
_21825
Position (kb)
4882
4883
4884
4885
4886 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4881.567 kb on + strand, within AO356_21815 at 4881.568 kb on - strand, within AO356_21815 at 4881.568 kb on - strand, within AO356_21815 at 4881.568 kb on - strand, within AO356_21815 at 4881.610 kb on - strand, within AO356_21815 at 4881.610 kb on - strand, within AO356_21815 at 4881.802 kb on - strand, within AO356_21815 at 4881.802 kb on - strand, within AO356_21815 at 4881.844 kb on - strand, within AO356_21815 at 4881.844 kb on - strand, within AO356_21815 at 4882.437 kb on + strand at 4882.437 kb on + strand at 4882.438 kb on - strand at 4882.438 kb on - strand at 4882.438 kb on - strand at 4882.438 kb on - strand at 4882.440 kb on + strand at 4882.441 kb on - strand at 4882.441 kb on - strand at 4882.441 kb on - strand at 4882.479 kb on + strand at 4882.541 kb on + strand at 4882.542 kb on - strand at 4882.788 kb on - strand at 4883.288 kb on + strand, within AO356_21820 at 4883.294 kb on + strand, within AO356_21820 at 4883.448 kb on - strand, within AO356_21820 at 4883.456 kb on + strand, within AO356_21820 at 4883.456 kb on + strand, within AO356_21820 at 4883.456 kb on + strand, within AO356_21820 at 4883.457 kb on - strand, within AO356_21820 at 4883.457 kb on - strand, within AO356_21820 at 4883.503 kb on + strand, within AO356_21820 at 4883.549 kb on + strand, within AO356_21820 at 4883.550 kb on - strand, within AO356_21820 at 4883.684 kb on + strand, within AO356_21820 at 4883.684 kb on + strand, within AO356_21820 at 4883.685 kb on - strand, within AO356_21820 at 4883.685 kb on - strand, within AO356_21820 at 4883.685 kb on - strand, within AO356_21820 at 4883.685 kb on - strand, within AO356_21820 at 4883.742 kb on - strand, within AO356_21820 at 4883.742 kb on - strand, within AO356_21820 at 4883.949 kb on + strand, within AO356_21820 at 4883.950 kb on - strand, within AO356_21820 at 4884.203 kb on + strand, within AO356_21820 at 4884.204 kb on - strand, within AO356_21820 at 4884.204 kb on - strand, within AO356_21820 at 4884.204 kb on - strand, within AO356_21820 at 4884.300 kb on - strand, within AO356_21820 at 4884.300 kb on - strand, within AO356_21820 at 4884.401 kb on + strand, within AO356_21820 at 4884.401 kb on + strand, within AO356_21820 at 4884.402 kb on - strand, within AO356_21820 at 4884.402 kb on - strand, within AO356_21820 at 4884.497 kb on + strand, within AO356_21820 at 4884.498 kb on - strand, within AO356_21820 at 4884.498 kb on - strand, within AO356_21820 at 4884.498 kb on - strand, within AO356_21820 at 4884.498 kb on - strand, within AO356_21820 at 4884.608 kb on + strand, within AO356_21820 at 4884.609 kb on - strand, within AO356_21820 at 4884.662 kb on + strand, within AO356_21820 at 4884.662 kb on + strand, within AO356_21820 at 4884.708 kb on - strand, within AO356_21820 at 4884.708 kb on - strand, within AO356_21820 at 4884.708 kb on - strand, within AO356_21820 at 4884.785 kb on + strand, within AO356_21820 at 4884.785 kb on + strand, within AO356_21820 at 4884.785 kb on + strand, within AO356_21820 at 4884.785 kb on + strand, within AO356_21820 at 4884.785 kb on + strand, within AO356_21820 at 4884.785 kb on + strand, within AO356_21820 at 4884.786 kb on - strand, within AO356_21820 at 4884.786 kb on - strand, within AO356_21820 at 4885.686 kb on + strand at 4885.687 kb on - strand at 4885.687 kb on - strand at 4886.081 kb on + strand at 4886.082 kb on - strand at 4886.082 kb on - strand at 4886.123 kb on + strand at 4886.282 kb on + strand, within AO356_21825 at 4886.282 kb on + strand, within AO356_21825 at 4886.282 kb on + strand, within AO356_21825 at 4886.283 kb on - strand, within AO356_21825 at 4886.285 kb on + strand, within AO356_21825 at 4886.285 kb on + strand, within AO356_21825 at 4886.519 kb on + strand, within AO356_21825
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 4,881,567 + AO356_21815 0.32 -0.3 4,881,568 - AO356_21815 0.32 +0.9 4,881,568 - AO356_21815 0.32 -0.6 4,881,568 - AO356_21815 0.32 -0.2 4,881,610 - AO356_21815 0.35 +0.1 4,881,610 - AO356_21815 0.35 +1.4 4,881,802 - AO356_21815 0.49 +0.6 4,881,802 - AO356_21815 0.49 +0.1 4,881,844 - AO356_21815 0.52 -0.5 4,881,844 - AO356_21815 0.52 -1.7 4,882,437 + +0.7 4,882,437 + +0.8 4,882,438 - +0.5 4,882,438 - +0.4 4,882,438 - +1.1 4,882,438 - +0.2 4,882,440 + +1.0 4,882,441 - -0.6 4,882,441 - +0.2 4,882,441 - +0.2 4,882,479 + +0.0 4,882,541 + +0.4 4,882,542 - -0.2 4,882,788 - +0.3 4,883,288 + AO356_21820 0.25 -1.1 4,883,294 + AO356_21820 0.25 +0.2 4,883,448 - AO356_21820 0.30 -0.6 4,883,456 + AO356_21820 0.30 +0.5 4,883,456 + AO356_21820 0.30 +0.1 4,883,456 + AO356_21820 0.30 +0.2 4,883,457 - AO356_21820 0.30 +0.0 4,883,457 - AO356_21820 0.30 -1.8 4,883,503 + AO356_21820 0.32 +0.4 4,883,549 + AO356_21820 0.33 +0.4 4,883,550 - AO356_21820 0.33 +0.5 4,883,684 + AO356_21820 0.38 -0.7 4,883,684 + AO356_21820 0.38 +0.3 4,883,685 - AO356_21820 0.38 -0.2 4,883,685 - AO356_21820 0.38 -1.2 4,883,685 - AO356_21820 0.38 +0.4 4,883,685 - AO356_21820 0.38 -0.6 4,883,742 - AO356_21820 0.39 -0.5 4,883,742 - AO356_21820 0.39 +1.1 4,883,949 + AO356_21820 0.46 -1.0 4,883,950 - AO356_21820 0.46 +0.3 4,884,203 + AO356_21820 0.54 +0.1 4,884,204 - AO356_21820 0.54 -0.3 4,884,204 - AO356_21820 0.54 +0.4 4,884,204 - AO356_21820 0.54 +1.3 4,884,300 - AO356_21820 0.58 +0.4 4,884,300 - AO356_21820 0.58 -0.8 4,884,401 + AO356_21820 0.61 +0.5 4,884,401 + AO356_21820 0.61 +0.4 4,884,402 - AO356_21820 0.61 +1.9 4,884,402 - AO356_21820 0.61 -0.1 4,884,497 + AO356_21820 0.64 -0.5 4,884,498 - AO356_21820 0.64 -0.4 4,884,498 - AO356_21820 0.64 -0.9 4,884,498 - AO356_21820 0.64 +0.4 4,884,498 - AO356_21820 0.64 +0.3 4,884,608 + AO356_21820 0.68 +0.4 4,884,609 - AO356_21820 0.68 +0.2 4,884,662 + AO356_21820 0.69 +0.1 4,884,662 + AO356_21820 0.69 +1.2 4,884,708 - AO356_21820 0.71 +0.5 4,884,708 - AO356_21820 0.71 -0.6 4,884,708 - AO356_21820 0.71 -0.4 4,884,785 + AO356_21820 0.73 -0.2 4,884,785 + AO356_21820 0.73 -0.1 4,884,785 + AO356_21820 0.73 +0.3 4,884,785 + AO356_21820 0.73 -0.2 4,884,785 + AO356_21820 0.73 +0.3 4,884,785 + AO356_21820 0.73 -1.0 4,884,786 - AO356_21820 0.73 -0.0 4,884,786 - AO356_21820 0.73 -0.2 4,885,686 + +0.2 4,885,687 - +0.3 4,885,687 - +1.3 4,886,081 + -0.5 4,886,082 - -0.3 4,886,082 - +0.4 4,886,123 + +1.4 4,886,282 + AO356_21825 0.17 -0.8 4,886,282 + AO356_21825 0.17 +0.3 4,886,282 + AO356_21825 0.17 -0.2 4,886,283 - AO356_21825 0.17 -0.7 4,886,285 + AO356_21825 0.17 +0.4 4,886,285 + AO356_21825 0.17 -0.9 4,886,519 + AO356_21825 0.28 -0.1
Or see this region's nucleotide sequence