Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_08895 and AO356_08900 are separated by 8 nucleotides AO356_08900 and AO356_08905 overlap by 1 nucleotides AO356_08905 and AO356_08910 overlap by 17 nucleotides
AO356_08895: AO356_08895 - GlcNAc-PI de-N-acetylase, at 2,004,876 to 2,006,276
_08895
AO356_08900: AO356_08900 - acetyltransferase, at 2,006,285 to 2,007,181
_08900
AO356_08905: AO356_08905 - glycosyl transferase, at 2,007,181 to 2,008,311
_08905
AO356_08910: AO356_08910 - carbamoyltransferase, at 2,008,295 to 2,010,052
_08910
Position (kb)
2007
2008
2009 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2006.217 kb on + strand at 2006.218 kb on - strand at 2006.289 kb on - strand at 2006.289 kb on - strand at 2006.328 kb on + strand at 2006.844 kb on + strand, within AO356_08900 at 2007.912 kb on - strand, within AO356_08905 at 2008.008 kb on - strand, within AO356_08905 at 2008.008 kb on - strand, within AO356_08905 at 2008.008 kb on - strand, within AO356_08905 at 2008.008 kb on - strand, within AO356_08905 at 2008.119 kb on - strand, within AO356_08905 at 2008.266 kb on - strand at 2008.312 kb on - strand at 2008.312 kb on - strand at 2008.360 kb on - strand at 2008.495 kb on - strand, within AO356_08910 at 2008.495 kb on - strand, within AO356_08910 at 2008.495 kb on - strand, within AO356_08910 at 2008.498 kb on - strand, within AO356_08910 at 2008.498 kb on - strand, within AO356_08910 at 2008.510 kb on - strand, within AO356_08910 at 2008.510 kb on - strand, within AO356_08910 at 2008.939 kb on - strand, within AO356_08910 at 2008.987 kb on - strand, within AO356_08910 at 2008.987 kb on - strand, within AO356_08910 at 2008.987 kb on - strand, within AO356_08910 at 2009.149 kb on - strand, within AO356_08910
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 2,006,217 + -0.1 2,006,218 - -1.5 2,006,289 - +0.5 2,006,289 - +0.8 2,006,328 + +0.2 2,006,844 + AO356_08900 0.62 -1.5 2,007,912 - AO356_08905 0.65 -0.4 2,008,008 - AO356_08905 0.73 -1.0 2,008,008 - AO356_08905 0.73 -0.6 2,008,008 - AO356_08905 0.73 -0.6 2,008,008 - AO356_08905 0.73 -0.3 2,008,119 - AO356_08905 0.83 -1.5 2,008,266 - -2.0 2,008,312 - -0.2 2,008,312 - +0.5 2,008,360 - +1.6 2,008,495 - AO356_08910 0.11 -0.5 2,008,495 - AO356_08910 0.11 -0.1 2,008,495 - AO356_08910 0.11 +0.1 2,008,498 - AO356_08910 0.12 +0.5 2,008,498 - AO356_08910 0.12 +0.0 2,008,510 - AO356_08910 0.12 +0.8 2,008,510 - AO356_08910 0.12 +2.4 2,008,939 - AO356_08910 0.37 +2.5 2,008,987 - AO356_08910 0.39 -0.1 2,008,987 - AO356_08910 0.39 +0.8 2,008,987 - AO356_08910 0.39 +2.4 2,009,149 - AO356_08910 0.49 +2.1
Or see this region's nucleotide sequence