Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07910 and AO356_07915 overlap by 4 nucleotides AO356_07915 and AO356_07920 overlap by 4 nucleotides
AO356_07910: AO356_07910 - exodeoxyribonuclease V subunit alpha, at 1,765,822 to 1,767,918
_07910
AO356_07915: AO356_07915 - exodeoxyribonuclease V subunit beta, at 1,767,915 to 1,771,604
_07915
AO356_07920: AO356_07920 - exodeoxyribonuclease V subunit gamma, at 1,771,601 to 1,775,053
_07920
Position (kb)
1767
1768
1769
1770
1771
1772 Strain fitness (log2 ratio)
-2
-1
0
1 at 1767.918 kb on + strand at 1767.918 kb on + strand at 1767.918 kb on + strand at 1767.919 kb on - strand at 1767.919 kb on - strand at 1768.022 kb on - strand at 1768.064 kb on - strand at 1768.142 kb on - strand at 1768.252 kb on + strand at 1768.810 kb on + strand, within AO356_07915 at 1768.810 kb on + strand, within AO356_07915 at 1769.222 kb on - strand, within AO356_07915 at 1769.505 kb on - strand, within AO356_07915 at 1770.292 kb on + strand, within AO356_07915 at 1770.330 kb on - strand, within AO356_07915 at 1771.209 kb on - strand, within AO356_07915 at 1771.209 kb on - strand, within AO356_07915 at 1771.209 kb on - strand, within AO356_07915 at 1771.393 kb on - strand at 1771.782 kb on + strand at 1772.394 kb on + strand, within AO356_07920 at 1772.395 kb on - strand, within AO356_07920 at 1772.551 kb on - strand, within AO356_07920 at 1772.551 kb on - strand, within AO356_07920
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,767,918 + +0.0 1,767,918 + -0.2 1,767,918 + -0.3 1,767,919 - -1.1 1,767,919 - -0.1 1,768,022 - -2.0 1,768,064 - -1.2 1,768,142 - +0.9 1,768,252 + -1.2 1,768,810 + AO356_07915 0.24 -0.6 1,768,810 + AO356_07915 0.24 -0.1 1,769,222 - AO356_07915 0.35 -1.0 1,769,505 - AO356_07915 0.43 -1.1 1,770,292 + AO356_07915 0.64 -1.4 1,770,330 - AO356_07915 0.65 -0.9 1,771,209 - AO356_07915 0.89 -0.6 1,771,209 - AO356_07915 0.89 -0.9 1,771,209 - AO356_07915 0.89 -0.1 1,771,393 - +0.6 1,771,782 + +1.2 1,772,394 + AO356_07920 0.23 -0.6 1,772,395 - AO356_07920 0.23 -1.2 1,772,551 - AO356_07920 0.28 -1.5 1,772,551 - AO356_07920 0.28 -1.6
Or see this region's nucleotide sequence