Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_06580

Experiment: L-Leucine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_06575 and AO356_06580 overlap by 8 nucleotidesAO356_06580 and AO356_06585 are separated by 40 nucleotides AO356_06575: AO356_06575 - outer membrane protein assembly factor BamB, at 1,456,903 to 1,458,054 _06575 AO356_06580: AO356_06580 - GTP-binding protein, at 1,458,047 to 1,458,688 _06580 AO356_06585: AO356_06585 - histidinol dehydrogenase, at 1,458,729 to 1,460,018 _06585 Position (kb) 1458 1459Strain fitness (log2 ratio) -1 0 1 2at 1457.310 kb on - strand, within AO356_06575at 1457.443 kb on - strand, within AO356_06575at 1457.532 kb on - strand, within AO356_06575at 1457.532 kb on - strand, within AO356_06575at 1457.532 kb on - strand, within AO356_06575at 1457.838 kb on - strand, within AO356_06575at 1457.838 kb on - strand, within AO356_06575at 1457.838 kb on - strand, within AO356_06575at 1457.838 kb on - strand, within AO356_06575at 1457.877 kb on - strand, within AO356_06575at 1458.412 kb on - strand, within AO356_06580at 1458.412 kb on - strand, within AO356_06580at 1458.421 kb on - strand, within AO356_06580at 1458.562 kb on - strand, within AO356_06580

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (N)
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1,457,310 - AO356_06575 0.35 +0.3
1,457,443 - AO356_06575 0.47 +0.0
1,457,532 - AO356_06575 0.55 -1.5
1,457,532 - AO356_06575 0.55 +2.4
1,457,532 - AO356_06575 0.55 +0.4
1,457,838 - AO356_06575 0.81 +0.4
1,457,838 - AO356_06575 0.81 -0.7
1,457,838 - AO356_06575 0.81 +1.0
1,457,838 - AO356_06575 0.81 +1.0
1,457,877 - AO356_06575 0.85 +1.8
1,458,412 - AO356_06580 0.57 -0.3
1,458,412 - AO356_06580 0.57 -0.4
1,458,421 - AO356_06580 0.58 -0.6
1,458,562 - AO356_06580 0.80 -1.1

Or see this region's nucleotide sequence