Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03860 and AO356_03865 are separated by 11 nucleotides AO356_03865 and AO356_03870 are separated by 131 nucleotides AO356_03870 and AO356_03875 are separated by 82 nucleotides AO356_03875 and AO356_03880 are separated by 72 nucleotides
AO356_03860: AO356_03860 - flagellar assembly protein FliT, at 855,052 to 855,348
_03860
AO356_03865: AO356_03865 - flagellar export chaperone FliS, at 855,360 to 855,755
_03865
AO356_03870: AO356_03870 - flagellar hook protein FliD, at 855,887 to 857,317
_03870
AO356_03875: AO356_03875 - flagellar biosynthesis protein FlaG, at 857,400 to 857,765
_03875
AO356_03880: AO356_03880 - flagellin, at 857,838 to 858,686
_03880
Position (kb) 855
856
857
858 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 854.887 kb on + strand at 854.887 kb on + strand at 854.887 kb on + strand at 854.887 kb on + strand at 854.888 kb on - strand at 854.888 kb on - strand at 854.899 kb on + strand at 854.900 kb on - strand at 854.933 kb on + strand at 854.934 kb on - strand at 854.934 kb on - strand at 854.934 kb on - strand at 854.961 kb on - strand at 854.961 kb on - strand at 854.969 kb on + strand at 854.970 kb on - strand at 854.977 kb on + strand at 854.986 kb on - strand at 854.988 kb on + strand at 854.988 kb on + strand at 854.988 kb on + strand at 854.989 kb on - strand at 854.989 kb on - strand at 854.989 kb on - strand at 854.989 kb on - strand at 854.989 kb on - strand at 854.993 kb on - strand at 854.993 kb on - strand at 854.993 kb on - strand at 854.993 kb on - strand at 855.042 kb on + strand at 855.043 kb on - strand at 855.068 kb on + strand at 855.069 kb on - strand at 855.069 kb on - strand at 855.361 kb on + strand at 855.362 kb on - strand at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.488 kb on - strand, within AO356_03865 at 855.488 kb on - strand, within AO356_03865 at 855.488 kb on - strand, within AO356_03865 at 855.488 kb on - strand, within AO356_03865 at 855.488 kb on - strand, within AO356_03865 at 855.493 kb on + strand, within AO356_03865 at 855.494 kb on - strand, within AO356_03865 at 855.605 kb on + strand, within AO356_03865 at 855.605 kb on + strand, within AO356_03865 at 855.641 kb on + strand, within AO356_03865 at 855.641 kb on + strand, within AO356_03865 at 855.642 kb on - strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.742 kb on - strand at 855.760 kb on + strand at 855.760 kb on + strand at 855.760 kb on + strand at 855.760 kb on + strand at 855.760 kb on + strand at 855.760 kb on + strand at 855.761 kb on - strand at 855.761 kb on - strand at 855.761 kb on - strand at 855.785 kb on + strand at 855.785 kb on + strand at 855.786 kb on - strand at 855.786 kb on - strand at 855.786 kb on - strand at 855.786 kb on - strand at 855.786 kb on - strand at 855.786 kb on - strand at 855.787 kb on + strand at 855.787 kb on + strand at 855.796 kb on + strand at 855.797 kb on - strand at 855.797 kb on - strand at 855.984 kb on + strand at 856.078 kb on + strand, within AO356_03870 at 856.113 kb on + strand, within AO356_03870 at 856.114 kb on - strand, within AO356_03870 at 856.114 kb on - strand, within AO356_03870 at 856.114 kb on - strand, within AO356_03870 at 856.262 kb on - strand, within AO356_03870 at 856.262 kb on - strand, within AO356_03870 at 856.429 kb on + strand, within AO356_03870 at 856.429 kb on + strand, within AO356_03870 at 856.430 kb on - strand, within AO356_03870 at 856.430 kb on - strand, within AO356_03870 at 856.446 kb on + strand, within AO356_03870 at 856.446 kb on + strand, within AO356_03870 at 856.446 kb on + strand, within AO356_03870 at 856.446 kb on + strand, within AO356_03870 at 856.447 kb on - strand, within AO356_03870 at 856.447 kb on - strand, within AO356_03870 at 856.447 kb on - strand, within AO356_03870 at 856.447 kb on - strand, within AO356_03870 at 856.447 kb on - strand, within AO356_03870 at 856.572 kb on - strand, within AO356_03870 at 856.576 kb on + strand, within AO356_03870 at 856.720 kb on + strand, within AO356_03870 at 856.721 kb on - strand, within AO356_03870 at 856.883 kb on + strand, within AO356_03870 at 856.884 kb on - strand, within AO356_03870 at 856.884 kb on - strand, within AO356_03870 at 856.884 kb on - strand, within AO356_03870 at 856.897 kb on - strand, within AO356_03870 at 856.897 kb on - strand, within AO356_03870 at 856.927 kb on + strand, within AO356_03870 at 856.927 kb on + strand, within AO356_03870 at 856.948 kb on + strand, within AO356_03870 at 856.949 kb on - strand, within AO356_03870 at 856.949 kb on - strand, within AO356_03870 at 857.016 kb on + strand, within AO356_03870 at 857.016 kb on + strand, within AO356_03870 at 857.016 kb on + strand, within AO356_03870 at 857.016 kb on + strand, within AO356_03870 at 857.016 kb on + strand, within AO356_03870 at 857.016 kb on + strand, within AO356_03870 at 857.016 kb on + strand, within AO356_03870 at 857.016 kb on + strand, within AO356_03870 at 857.016 kb on + strand, within AO356_03870 at 857.017 kb on - strand, within AO356_03870 at 857.017 kb on - strand, within AO356_03870 at 857.017 kb on - strand, within AO356_03870 at 857.017 kb on - strand, within AO356_03870 at 857.017 kb on - strand, within AO356_03870 at 857.017 kb on - strand, within AO356_03870 at 857.017 kb on - strand, within AO356_03870 at 857.017 kb on - strand, within AO356_03870 at 857.017 kb on - strand, within AO356_03870 at 857.020 kb on + strand, within AO356_03870 at 857.021 kb on - strand, within AO356_03870 at 857.039 kb on - strand, within AO356_03870 at 857.179 kb on + strand at 857.179 kb on + strand at 857.179 kb on + strand at 857.179 kb on + strand at 857.179 kb on + strand at 857.179 kb on + strand at 857.180 kb on - strand at 857.180 kb on - strand at 857.180 kb on - strand at 857.180 kb on - strand at 857.180 kb on - strand at 857.285 kb on + strand at 857.300 kb on + strand at 857.300 kb on + strand at 857.357 kb on + strand at 857.357 kb on + strand at 857.357 kb on + strand at 857.357 kb on + strand at 857.358 kb on - strand at 857.376 kb on + strand at 857.376 kb on + strand at 857.377 kb on - strand at 857.377 kb on - strand at 857.377 kb on - strand at 857.377 kb on - strand at 857.523 kb on + strand, within AO356_03875 at 857.523 kb on + strand, within AO356_03875 at 857.523 kb on + strand, within AO356_03875 at 857.524 kb on - strand, within AO356_03875 at 857.546 kb on + strand, within AO356_03875 at 857.640 kb on - strand, within AO356_03875 at 857.711 kb on + strand, within AO356_03875 at 857.711 kb on + strand, within AO356_03875 at 857.711 kb on + strand, within AO356_03875 at 857.711 kb on + strand, within AO356_03875 at 857.712 kb on - strand, within AO356_03875 at 857.712 kb on - strand, within AO356_03875 at 857.712 kb on - strand, within AO356_03875 at 857.712 kb on - strand, within AO356_03875 at 857.712 kb on - strand, within AO356_03875 at 857.759 kb on + strand at 857.836 kb on + strand at 857.836 kb on + strand at 857.837 kb on - strand at 857.837 kb on - strand at 857.837 kb on - strand at 857.837 kb on - strand at 857.839 kb on + strand at 857.840 kb on - strand at 857.856 kb on + strand at 857.857 kb on - strand at 857.897 kb on + strand at 857.897 kb on + strand at 857.958 kb on - strand, within AO356_03880 at 857.964 kb on + strand, within AO356_03880 at 857.965 kb on - strand, within AO356_03880 at 858.128 kb on + strand, within AO356_03880 at 858.128 kb on + strand, within AO356_03880 at 858.129 kb on - strand, within AO356_03880
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 854,887 + +0.4 854,887 + +0.9 854,887 + +0.6 854,887 + +0.6 854,888 - +1.1 854,888 - +0.7 854,899 + +0.3 854,900 - -2.1 854,933 + -0.5 854,934 - +1.3 854,934 - +0.6 854,934 - +0.6 854,961 - -0.0 854,961 - +1.1 854,969 + +2.6 854,970 - +1.1 854,977 + +1.0 854,986 - -0.8 854,988 + +0.9 854,988 + +1.8 854,988 + +1.1 854,989 - +0.1 854,989 - +1.1 854,989 - +1.0 854,989 - -2.0 854,989 - +1.1 854,993 - +1.3 854,993 - +0.7 854,993 - +1.2 854,993 - -0.0 855,042 + +0.8 855,043 - -0.4 855,068 + +1.0 855,069 - +0.0 855,069 - +0.2 855,361 + -0.1 855,362 - -0.1 855,487 + AO356_03865 0.32 +0.8 855,487 + AO356_03865 0.32 -0.1 855,487 + AO356_03865 0.32 -0.2 855,487 + AO356_03865 0.32 -0.1 855,487 + AO356_03865 0.32 +0.4 855,487 + AO356_03865 0.32 -0.1 855,487 + AO356_03865 0.32 -1.3 855,487 + AO356_03865 0.32 +0.7 855,487 + AO356_03865 0.32 -0.0 855,488 - AO356_03865 0.32 -0.2 855,488 - AO356_03865 0.32 -0.4 855,488 - AO356_03865 0.32 +0.9 855,488 - AO356_03865 0.32 -1.0 855,488 - AO356_03865 0.32 +0.1 855,493 + AO356_03865 0.34 +0.1 855,494 - AO356_03865 0.34 +0.1 855,605 + AO356_03865 0.62 -0.0 855,605 + AO356_03865 0.62 +1.0 855,641 + AO356_03865 0.71 +0.6 855,641 + AO356_03865 0.71 +0.1 855,642 - AO356_03865 0.71 +0.4 855,672 + AO356_03865 0.79 -1.3 855,672 + AO356_03865 0.79 -1.2 855,672 + AO356_03865 0.79 -0.2 855,672 + AO356_03865 0.79 -0.1 855,672 + AO356_03865 0.79 +0.2 855,672 + AO356_03865 0.79 -0.3 855,672 + AO356_03865 0.79 -0.0 855,673 - AO356_03865 0.79 -0.6 855,673 - AO356_03865 0.79 -1.3 855,673 - AO356_03865 0.79 -0.6 855,673 - AO356_03865 0.79 -0.1 855,673 - AO356_03865 0.79 -0.4 855,673 - AO356_03865 0.79 +0.7 855,673 - AO356_03865 0.79 -1.0 855,673 - AO356_03865 0.79 -0.4 855,673 - AO356_03865 0.79 -1.7 855,742 - +0.5 855,760 + -2.0 855,760 + +1.6 855,760 + -0.7 855,760 + -0.0 855,760 + +1.0 855,760 + -0.0 855,761 - -0.5 855,761 - -0.1 855,761 - -0.7 855,785 + -0.7 855,785 + +0.2 855,786 - -0.5 855,786 - -0.1 855,786 - -1.1 855,786 - +0.3 855,786 - +0.4 855,786 - +0.1 855,787 + -0.4 855,787 + -1.6 855,796 + +0.6 855,797 - -0.2 855,797 - -0.2 855,984 + -2.0 856,078 + AO356_03870 0.13 -0.3 856,113 + AO356_03870 0.16 -0.3 856,114 - AO356_03870 0.16 -0.6 856,114 - AO356_03870 0.16 -0.3 856,114 - AO356_03870 0.16 -1.5 856,262 - AO356_03870 0.26 +0.1 856,262 - AO356_03870 0.26 -1.8 856,429 + AO356_03870 0.38 -0.9 856,429 + AO356_03870 0.38 +0.2 856,430 - AO356_03870 0.38 -1.2 856,430 - AO356_03870 0.38 -1.2 856,446 + AO356_03870 0.39 +1.6 856,446 + AO356_03870 0.39 -0.8 856,446 + AO356_03870 0.39 -1.6 856,446 + AO356_03870 0.39 +0.2 856,447 - AO356_03870 0.39 -0.9 856,447 - AO356_03870 0.39 -0.4 856,447 - AO356_03870 0.39 +0.6 856,447 - AO356_03870 0.39 -0.5 856,447 - AO356_03870 0.39 -0.9 856,572 - AO356_03870 0.48 -0.5 856,576 + AO356_03870 0.48 -0.5 856,720 + AO356_03870 0.58 -0.8 856,721 - AO356_03870 0.58 -1.6 856,883 + AO356_03870 0.70 -1.2 856,884 - AO356_03870 0.70 -1.1 856,884 - AO356_03870 0.70 -3.8 856,884 - AO356_03870 0.70 -2.6 856,897 - AO356_03870 0.71 -1.3 856,897 - AO356_03870 0.71 -0.4 856,927 + AO356_03870 0.73 -1.2 856,927 + AO356_03870 0.73 -0.2 856,948 + AO356_03870 0.74 -0.5 856,949 - AO356_03870 0.74 -0.7 856,949 - AO356_03870 0.74 -1.1 857,016 + AO356_03870 0.79 -1.4 857,016 + AO356_03870 0.79 -2.9 857,016 + AO356_03870 0.79 -0.9 857,016 + AO356_03870 0.79 -1.2 857,016 + AO356_03870 0.79 -0.8 857,016 + AO356_03870 0.79 -0.5 857,016 + AO356_03870 0.79 -0.3 857,016 + AO356_03870 0.79 -0.6 857,016 + AO356_03870 0.79 +0.4 857,017 - AO356_03870 0.79 -0.6 857,017 - AO356_03870 0.79 -0.8 857,017 - AO356_03870 0.79 -1.6 857,017 - AO356_03870 0.79 -0.4 857,017 - AO356_03870 0.79 +1.2 857,017 - AO356_03870 0.79 -1.4 857,017 - AO356_03870 0.79 +0.6 857,017 - AO356_03870 0.79 -0.8 857,017 - AO356_03870 0.79 -3.0 857,020 + AO356_03870 0.79 -1.0 857,021 - AO356_03870 0.79 -1.2 857,039 - AO356_03870 0.81 -0.6 857,179 + -0.6 857,179 + +1.6 857,179 + -1.6 857,179 + +0.6 857,179 + -1.2 857,179 + -0.9 857,180 - -1.8 857,180 - -1.9 857,180 - -0.7 857,180 - -1.0 857,180 - -1.1 857,285 + -1.0 857,300 + -1.1 857,300 + -2.0 857,357 + -0.6 857,357 + -0.3 857,357 + -1.9 857,357 + -1.3 857,358 - +0.1 857,376 + -1.0 857,376 + -1.4 857,377 - +0.6 857,377 - -0.5 857,377 - -0.0 857,377 - -0.4 857,523 + AO356_03875 0.34 -0.8 857,523 + AO356_03875 0.34 -0.7 857,523 + AO356_03875 0.34 +0.1 857,524 - AO356_03875 0.34 +0.5 857,546 + AO356_03875 0.40 -0.2 857,640 - AO356_03875 0.66 +0.2 857,711 + AO356_03875 0.85 -0.2 857,711 + AO356_03875 0.85 -0.2 857,711 + AO356_03875 0.85 +0.3 857,711 + AO356_03875 0.85 -0.7 857,712 - AO356_03875 0.85 +0.9 857,712 - AO356_03875 0.85 -0.1 857,712 - AO356_03875 0.85 -0.1 857,712 - AO356_03875 0.85 +0.5 857,712 - AO356_03875 0.85 +0.1 857,759 + -0.8 857,836 + -0.6 857,836 + +0.7 857,837 - -0.5 857,837 - -0.3 857,837 - +0.3 857,837 - -1.3 857,839 + -0.3 857,840 - +0.1 857,856 + -0.4 857,857 - -0.3 857,897 + +0.1 857,897 + -0.9 857,958 - AO356_03880 0.14 -0.2 857,964 + AO356_03880 0.15 +0.4 857,965 - AO356_03880 0.15 -0.6 858,128 + AO356_03880 0.34 +0.2 858,128 + AO356_03880 0.34 -0.3 858,129 - AO356_03880 0.34 +0.0
Or see this region's nucleotide sequence