Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01585 and AO356_01590 are separated by 13 nucleotides AO356_01590 and AO356_01595 overlap by 4 nucleotides AO356_01595 and AO356_01600 are separated by 29 nucleotides AO356_01600 and AO356_01605 are separated by 130 nucleotides
AO356_01585: AO356_01585 - 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) , at 357,745 to 359,352
_01585
AO356_01590: AO356_01590 - Methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) , at 359,366 to 360,187
_01590
AO356_01595: AO356_01595 - 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) , at 360,184 to 362,133
_01595
AO356_01600: AO356_01600 - Cro/Cl family transcriptional regulator, at 362,163 to 362,810
_01600
AO356_01605: AO356_01605 - hypothetical protein, at 362,941 to 363,282
_01605
Position (kb)
360
361
362
363 Strain fitness (log2 ratio)
-2
-1
0
1 at 359.197 kb on + strand at 359.197 kb on + strand at 359.197 kb on + strand at 359.219 kb on - strand at 359.219 kb on - strand at 359.221 kb on + strand at 359.221 kb on + strand at 359.221 kb on + strand at 359.222 kb on - strand at 359.222 kb on - strand at 359.279 kb on + strand at 359.280 kb on - strand at 359.280 kb on - strand at 359.351 kb on - strand at 359.351 kb on - strand at 359.351 kb on - strand at 359.513 kb on - strand, within AO356_01590 at 359.603 kb on + strand, within AO356_01590 at 359.648 kb on + strand, within AO356_01590 at 359.648 kb on + strand, within AO356_01590 at 359.648 kb on + strand, within AO356_01590 at 359.648 kb on + strand, within AO356_01590 at 359.648 kb on + strand, within AO356_01590 at 359.648 kb on + strand, within AO356_01590 at 359.648 kb on + strand, within AO356_01590 at 359.649 kb on - strand, within AO356_01590 at 359.649 kb on - strand, within AO356_01590 at 359.722 kb on + strand, within AO356_01590 at 359.722 kb on + strand, within AO356_01590 at 359.723 kb on - strand, within AO356_01590 at 359.974 kb on - strand, within AO356_01590 at 359.974 kb on - strand, within AO356_01590 at 360.060 kb on - strand, within AO356_01590 at 360.164 kb on - strand at 360.287 kb on + strand at 360.373 kb on + strand at 360.373 kb on + strand at 360.374 kb on - strand at 360.374 kb on - strand at 360.799 kb on + strand, within AO356_01595 at 360.862 kb on + strand, within AO356_01595 at 360.997 kb on + strand, within AO356_01595 at 360.997 kb on + strand, within AO356_01595 at 360.998 kb on - strand, within AO356_01595 at 361.213 kb on + strand, within AO356_01595 at 361.213 kb on + strand, within AO356_01595 at 361.213 kb on + strand, within AO356_01595 at 361.214 kb on - strand, within AO356_01595 at 361.214 kb on - strand, within AO356_01595 at 361.214 kb on - strand, within AO356_01595 at 361.214 kb on - strand, within AO356_01595 at 361.267 kb on + strand, within AO356_01595 at 361.343 kb on - strand, within AO356_01595 at 361.518 kb on + strand, within AO356_01595 at 361.519 kb on - strand, within AO356_01595 at 361.519 kb on - strand, within AO356_01595 at 361.541 kb on + strand, within AO356_01595 at 361.541 kb on + strand, within AO356_01595 at 361.622 kb on + strand, within AO356_01595 at 361.622 kb on + strand, within AO356_01595 at 361.841 kb on - strand, within AO356_01595 at 361.841 kb on - strand, within AO356_01595 at 361.879 kb on + strand, within AO356_01595 at 361.879 kb on + strand, within AO356_01595 at 362.009 kb on + strand at 362.075 kb on - strand at 362.131 kb on + strand at 362.190 kb on + strand at 362.190 kb on + strand at 362.190 kb on + strand at 362.191 kb on - strand at 362.191 kb on - strand at 362.191 kb on - strand at 362.218 kb on + strand at 362.257 kb on + strand, within AO356_01600 at 362.258 kb on - strand, within AO356_01600 at 362.458 kb on + strand, within AO356_01600 at 362.458 kb on + strand, within AO356_01600 at 362.458 kb on + strand, within AO356_01600 at 362.459 kb on - strand, within AO356_01600 at 362.488 kb on + strand, within AO356_01600 at 362.554 kb on + strand, within AO356_01600 at 362.563 kb on + strand, within AO356_01600 at 362.563 kb on + strand, within AO356_01600 at 362.564 kb on - strand, within AO356_01600 at 362.796 kb on + strand at 362.797 kb on - strand at 362.804 kb on + strand at 362.805 kb on - strand at 362.822 kb on + strand at 362.822 kb on + strand at 362.822 kb on + strand at 362.822 kb on + strand at 362.822 kb on + strand at 362.823 kb on - strand at 362.823 kb on - strand at 362.823 kb on - strand at 362.823 kb on - strand at 362.823 kb on - strand at 362.890 kb on + strand at 362.956 kb on - strand at 362.956 kb on - strand at 363.034 kb on + strand, within AO356_01605 at 363.035 kb on - strand, within AO356_01605 at 363.035 kb on - strand, within AO356_01605 at 363.037 kb on + strand, within AO356_01605 at 363.037 kb on + strand, within AO356_01605 at 363.037 kb on + strand, within AO356_01605 at 363.038 kb on - strand, within AO356_01605 at 363.038 kb on - strand, within AO356_01605 at 363.038 kb on - strand, within AO356_01605
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 359,197 + -0.1 359,197 + +0.6 359,197 + -0.2 359,219 - -0.6 359,219 - +0.5 359,221 + +0.2 359,221 + -1.5 359,221 + -0.2 359,222 - -0.7 359,222 - -0.1 359,279 + -1.6 359,280 - -1.5 359,280 - -1.3 359,351 - -1.0 359,351 - -0.5 359,351 - -1.9 359,513 - AO356_01590 0.18 -0.0 359,603 + AO356_01590 0.29 -1.1 359,648 + AO356_01590 0.34 -1.0 359,648 + AO356_01590 0.34 -0.5 359,648 + AO356_01590 0.34 -0.1 359,648 + AO356_01590 0.34 -2.3 359,648 + AO356_01590 0.34 -1.2 359,648 + AO356_01590 0.34 -1.5 359,648 + AO356_01590 0.34 -1.9 359,649 - AO356_01590 0.34 -0.3 359,649 - AO356_01590 0.34 -1.3 359,722 + AO356_01590 0.43 +0.8 359,722 + AO356_01590 0.43 -2.2 359,723 - AO356_01590 0.43 +0.2 359,974 - AO356_01590 0.74 +1.4 359,974 - AO356_01590 0.74 -1.0 360,060 - AO356_01590 0.84 +0.1 360,164 - -0.5 360,287 + -1.9 360,373 + -0.6 360,373 + -1.2 360,374 - -1.7 360,374 - -1.3 360,799 + AO356_01595 0.32 +0.1 360,862 + AO356_01595 0.35 +0.5 360,997 + AO356_01595 0.42 -0.8 360,997 + AO356_01595 0.42 -0.7 360,998 - AO356_01595 0.42 -0.7 361,213 + AO356_01595 0.53 -0.2 361,213 + AO356_01595 0.53 +0.0 361,213 + AO356_01595 0.53 -1.1 361,214 - AO356_01595 0.53 -1.1 361,214 - AO356_01595 0.53 -1.0 361,214 - AO356_01595 0.53 -0.5 361,214 - AO356_01595 0.53 -0.8 361,267 + AO356_01595 0.56 -1.0 361,343 - AO356_01595 0.59 +0.5 361,518 + AO356_01595 0.68 -0.8 361,519 - AO356_01595 0.68 +0.0 361,519 - AO356_01595 0.68 -1.8 361,541 + AO356_01595 0.70 -1.0 361,541 + AO356_01595 0.70 -0.8 361,622 + AO356_01595 0.74 +0.3 361,622 + AO356_01595 0.74 -0.8 361,841 - AO356_01595 0.85 -2.1 361,841 - AO356_01595 0.85 -1.4 361,879 + AO356_01595 0.87 +1.4 361,879 + AO356_01595 0.87 -1.5 362,009 + -1.3 362,075 - -0.6 362,131 + +0.0 362,190 + -0.9 362,190 + +0.2 362,190 + +0.8 362,191 - +0.4 362,191 - -0.3 362,191 - -0.3 362,218 + -0.1 362,257 + AO356_01600 0.15 -0.0 362,258 - AO356_01600 0.15 +0.0 362,458 + AO356_01600 0.46 +0.6 362,458 + AO356_01600 0.46 -0.3 362,458 + AO356_01600 0.46 +0.9 362,459 - AO356_01600 0.46 +0.4 362,488 + AO356_01600 0.50 -0.1 362,554 + AO356_01600 0.60 +0.7 362,563 + AO356_01600 0.62 +0.1 362,563 + AO356_01600 0.62 +0.1 362,564 - AO356_01600 0.62 +0.2 362,796 + +0.8 362,797 - +0.2 362,804 + +1.0 362,805 - +0.7 362,822 + +0.5 362,822 + -0.1 362,822 + +0.9 362,822 + +0.8 362,822 + +0.5 362,823 - +0.8 362,823 - +0.3 362,823 - +0.0 362,823 - +0.2 362,823 - +0.5 362,890 + -1.2 362,956 - -0.2 362,956 - +0.3 363,034 + AO356_01605 0.27 +0.6 363,035 - AO356_01605 0.27 +0.0 363,035 - AO356_01605 0.27 +0.5 363,037 + AO356_01605 0.28 -0.3 363,037 + AO356_01605 0.28 +0.0 363,037 + AO356_01605 0.28 -0.1 363,038 - AO356_01605 0.28 +0.4 363,038 - AO356_01605 0.28 +0.6 363,038 - AO356_01605 0.28 +0.1
Or see this region's nucleotide sequence