Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_00450 and AO356_00455 are separated by 41 nucleotides AO356_00455 and AO356_00460 are separated by 214 nucleotides AO356_00460 and AO356_00465 are separated by 25 nucleotides
AO356_00450: AO356_00450 - D-glucosaminate dehydratase (EC 4.3.1.9) (from data) , at 93,985 to 95,202
_00450
AO356_00455: AO356_00455 - IclR family transcriptional regulator, at 95,244 to 96,008
_00455
AO356_00460: AO356_00460 - reactive intermediate/imine deaminase, at 96,223 to 96,612
_00460
AO356_00465: AO356_00465 - ABC transporter for D-Glucosamine, putative ATPase component (from data) , at 96,638 to 97,429
_00465
Position (kb)
95
96
97 Strain fitness (log2 ratio)
-2
-1
0
1 at 94.248 kb on - strand, within AO356_00450 at 94.391 kb on + strand, within AO356_00450 at 94.392 kb on - strand, within AO356_00450 at 94.416 kb on - strand, within AO356_00450 at 94.416 kb on - strand, within AO356_00450 at 94.416 kb on - strand, within AO356_00450 at 94.490 kb on + strand, within AO356_00450 at 94.635 kb on - strand, within AO356_00450 at 94.742 kb on + strand, within AO356_00450 at 94.742 kb on + strand, within AO356_00450 at 95.173 kb on + strand at 95.208 kb on + strand at 95.209 kb on - strand at 95.209 kb on - strand at 95.241 kb on + strand at 95.241 kb on + strand at 95.242 kb on - strand at 95.242 kb on - strand at 95.245 kb on + strand at 95.245 kb on + strand at 95.245 kb on + strand at 95.246 kb on - strand at 95.308 kb on + strand at 95.309 kb on - strand at 95.662 kb on + strand, within AO356_00455 at 95.663 kb on - strand, within AO356_00455 at 95.663 kb on - strand, within AO356_00455 at 95.785 kb on + strand, within AO356_00455 at 95.786 kb on - strand, within AO356_00455 at 95.869 kb on + strand, within AO356_00455 at 95.869 kb on + strand, within AO356_00455 at 95.869 kb on + strand, within AO356_00455 at 95.869 kb on + strand, within AO356_00455 at 95.869 kb on + strand, within AO356_00455 at 95.869 kb on + strand, within AO356_00455 at 95.870 kb on - strand, within AO356_00455 at 96.033 kb on + strand at 96.033 kb on + strand at 96.034 kb on - strand at 96.034 kb on - strand at 96.120 kb on - strand at 96.167 kb on + strand at 96.167 kb on + strand at 96.239 kb on + strand at 96.240 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 94,248 - AO356_00450 0.22 +0.6 94,391 + AO356_00450 0.33 +0.5 94,392 - AO356_00450 0.33 +0.6 94,416 - AO356_00450 0.35 +1.3 94,416 - AO356_00450 0.35 +0.6 94,416 - AO356_00450 0.35 +0.3 94,490 + AO356_00450 0.41 +1.2 94,635 - AO356_00450 0.53 -1.1 94,742 + AO356_00450 0.62 -0.2 94,742 + AO356_00450 0.62 +0.5 95,173 + -0.6 95,208 + +0.6 95,209 - +0.9 95,209 - +1.1 95,241 + -0.1 95,241 + +0.4 95,242 - -0.0 95,242 - -0.1 95,245 + +1.1 95,245 + +0.7 95,245 + -0.0 95,246 - +1.1 95,308 + -0.7 95,309 - +0.7 95,662 + AO356_00455 0.55 -1.5 95,663 - AO356_00455 0.55 -1.0 95,663 - AO356_00455 0.55 -0.6 95,785 + AO356_00455 0.71 -1.4 95,786 - AO356_00455 0.71 -2.7 95,869 + AO356_00455 0.82 -1.2 95,869 + AO356_00455 0.82 -0.1 95,869 + AO356_00455 0.82 -1.7 95,869 + AO356_00455 0.82 -1.0 95,869 + AO356_00455 0.82 -0.6 95,869 + AO356_00455 0.82 -0.8 95,870 - AO356_00455 0.82 -0.0 96,033 + -1.1 96,033 + +0.1 96,034 - +0.1 96,034 - +0.4 96,120 - +0.4 96,167 + -0.7 96,167 + -0.1 96,239 + +0.4 96,240 - -0.4
Or see this region's nucleotide sequence