Experiment: m.b. Aluminum chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3066 and Dshi_3067 are separated by 100 nucleotides Dshi_3067 and Dshi_3068 are separated by 302 nucleotides
Dshi_3066: Dshi_3066 - acetyl-CoA acetyltransferase (RefSeq), at 3,234,503 to 3,235,678
_3066
Dshi_3067: Dshi_3067 - acetoacetyl-CoA reductase (RefSeq), at 3,235,779 to 3,236,501
_3067
Dshi_3068: Dshi_3068 - transcriptional regulator, LysR family (RefSeq), at 3,236,804 to 3,237,751
_3068
Position (kb)
3235
3236
3237 Strain fitness (log2 ratio)
-1
0
1 at 3234.869 kb on + strand, within Dshi_3066 at 3234.877 kb on - strand, within Dshi_3066 at 3234.890 kb on + strand, within Dshi_3066 at 3234.966 kb on + strand, within Dshi_3066 at 3234.979 kb on - strand, within Dshi_3066 at 3235.156 kb on - strand, within Dshi_3066 at 3235.407 kb on - strand, within Dshi_3066 at 3235.460 kb on + strand, within Dshi_3066 at 3235.460 kb on + strand, within Dshi_3066 at 3235.473 kb on - strand, within Dshi_3066 at 3235.489 kb on + strand, within Dshi_3066 at 3235.855 kb on + strand, within Dshi_3067 at 3235.863 kb on - strand, within Dshi_3067 at 3235.930 kb on - strand, within Dshi_3067 at 3236.036 kb on - strand, within Dshi_3067 at 3236.065 kb on - strand, within Dshi_3067 at 3236.134 kb on - strand, within Dshi_3067 at 3236.238 kb on + strand, within Dshi_3067 at 3236.526 kb on - strand at 3236.645 kb on + strand at 3237.023 kb on + strand, within Dshi_3068 at 3237.132 kb on + strand, within Dshi_3068 at 3237.140 kb on - strand, within Dshi_3068 at 3237.201 kb on - strand, within Dshi_3068
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 0.5 mM remove 3,234,869 + Dshi_3066 0.31 -1.0 3,234,877 - Dshi_3066 0.32 -0.6 3,234,890 + Dshi_3066 0.33 -0.6 3,234,966 + Dshi_3066 0.39 +1.1 3,234,979 - Dshi_3066 0.40 -0.4 3,235,156 - Dshi_3066 0.56 -0.4 3,235,407 - Dshi_3066 0.77 -0.1 3,235,460 + Dshi_3066 0.81 +1.5 3,235,460 + Dshi_3066 0.81 +0.5 3,235,473 - Dshi_3066 0.82 -0.3 3,235,489 + Dshi_3066 0.84 +0.5 3,235,855 + Dshi_3067 0.11 -0.6 3,235,863 - Dshi_3067 0.12 -0.3 3,235,930 - Dshi_3067 0.21 -0.8 3,236,036 - Dshi_3067 0.36 -0.8 3,236,065 - Dshi_3067 0.40 -0.6 3,236,134 - Dshi_3067 0.49 -0.6 3,236,238 + Dshi_3067 0.63 +0.8 3,236,526 - -0.2 3,236,645 + -0.3 3,237,023 + Dshi_3068 0.23 -0.1 3,237,132 + Dshi_3068 0.35 -0.3 3,237,140 - Dshi_3068 0.35 -0.7 3,237,201 - Dshi_3068 0.42 +0.4
Or see this region's nucleotide sequence