Experiment: m.b. Aluminum chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2355 and Dshi_2356 are separated by 100 nucleotides Dshi_2356 and Dshi_2357 are separated by 142 nucleotides
Dshi_2355: Dshi_2355 - VWA containing CoxE family protein (RefSeq), at 2,488,833 to 2,490,095
_2355
Dshi_2356: Dshi_2356 - ATPase associated with various cellular activities AAA_5 (RefSeq), at 2,490,196 to 2,491,107
_2356
Dshi_2357: Dshi_2357 - acyl-CoA dehydrogenase domain protein (RefSeq), at 2,491,250 to 2,492,470
_2357
Position (kb)
2490
2491
2492 Strain fitness (log2 ratio)
-2
-1
0
1 at 2489.210 kb on - strand, within Dshi_2355 at 2489.269 kb on + strand, within Dshi_2355 at 2489.287 kb on + strand, within Dshi_2355 at 2489.314 kb on - strand, within Dshi_2355 at 2489.318 kb on - strand, within Dshi_2355 at 2489.323 kb on + strand, within Dshi_2355 at 2489.532 kb on - strand, within Dshi_2355 at 2489.602 kb on + strand, within Dshi_2355 at 2489.767 kb on + strand, within Dshi_2355 at 2489.856 kb on - strand, within Dshi_2355 at 2490.003 kb on - strand at 2490.139 kb on + strand at 2490.525 kb on - strand, within Dshi_2356 at 2490.810 kb on - strand, within Dshi_2356 at 2490.859 kb on - strand, within Dshi_2356 at 2490.910 kb on + strand, within Dshi_2356 at 2491.134 kb on - strand at 2491.139 kb on - strand at 2491.291 kb on + strand at 2491.306 kb on - strand at 2491.316 kb on - strand at 2491.454 kb on + strand, within Dshi_2357 at 2491.528 kb on - strand, within Dshi_2357 at 2491.528 kb on - strand, within Dshi_2357 at 2491.689 kb on + strand, within Dshi_2357 at 2491.697 kb on - strand, within Dshi_2357 at 2491.715 kb on + strand, within Dshi_2357 at 2491.730 kb on + strand, within Dshi_2357 at 2491.887 kb on + strand, within Dshi_2357 at 2491.993 kb on + strand, within Dshi_2357
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 0.5 mM remove 2,489,210 - Dshi_2355 0.30 +0.1 2,489,269 + Dshi_2355 0.35 -1.9 2,489,287 + Dshi_2355 0.36 +0.8 2,489,314 - Dshi_2355 0.38 +0.7 2,489,318 - Dshi_2355 0.38 -0.5 2,489,323 + Dshi_2355 0.39 +0.1 2,489,532 - Dshi_2355 0.55 +0.5 2,489,602 + Dshi_2355 0.61 -0.9 2,489,767 + Dshi_2355 0.74 +0.5 2,489,856 - Dshi_2355 0.81 -0.2 2,490,003 - +1.2 2,490,139 + -0.2 2,490,525 - Dshi_2356 0.36 -0.1 2,490,810 - Dshi_2356 0.67 +0.6 2,490,859 - Dshi_2356 0.73 -1.6 2,490,910 + Dshi_2356 0.78 -1.0 2,491,134 - +0.3 2,491,139 - +0.9 2,491,291 + -0.9 2,491,306 - -0.3 2,491,316 - +0.1 2,491,454 + Dshi_2357 0.17 -1.1 2,491,528 - Dshi_2357 0.23 -1.1 2,491,528 - Dshi_2357 0.23 +1.3 2,491,689 + Dshi_2357 0.36 -0.4 2,491,697 - Dshi_2357 0.37 +0.0 2,491,715 + Dshi_2357 0.38 -0.2 2,491,730 + Dshi_2357 0.39 +1.5 2,491,887 + Dshi_2357 0.52 -1.3 2,491,993 + Dshi_2357 0.61 -0.0
Or see this region's nucleotide sequence