Experiment: m.b. Aluminum chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0762 and Dshi_0763 are separated by 90 nucleotides Dshi_0763 and Dshi_0764 overlap by 4 nucleotides Dshi_0764 and Dshi_0765 are separated by 112 nucleotides Dshi_0765 and Dshi_0766 are separated by 77 nucleotides
Dshi_0762: Dshi_0762 - aminotransferase class I and II (RefSeq), at 771,187 to 772,389
_0762
Dshi_0763: Dshi_0763 - transcriptional regulator, XRE family (RefSeq), at 772,480 to 772,872
_0763
Dshi_0764: Dshi_0764 - protein of unknown function DUF339 (RefSeq), at 772,869 to 773,168
_0764
Dshi_0765: Dshi_0765 - transcriptional regulator, MarR family (RefSeq), at 773,281 to 773,778
_0765
Dshi_0766: Dshi_0766 - protein of unknown function DUF1194 (RefSeq), at 773,856 to 774,593
_0766
Position (kb) 772
773 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 772.424 kb on + strand at 772.465 kb on + strand at 772.599 kb on + strand, within Dshi_0763 at 772.624 kb on - strand, within Dshi_0763 at 772.699 kb on - strand, within Dshi_0763 at 772.718 kb on - strand, within Dshi_0763 at 772.749 kb on + strand, within Dshi_0763 at 772.789 kb on + strand, within Dshi_0763 at 772.806 kb on - strand, within Dshi_0763 at 772.894 kb on - strand at 773.151 kb on + strand at 773.164 kb on - strand at 773.171 kb on + strand at 773.209 kb on - strand at 773.443 kb on + strand at 773.495 kb on - strand, within Dshi_0765 at 773.566 kb on + strand, within Dshi_0765 at 773.621 kb on + strand, within Dshi_0765 at 773.745 kb on + strand at 773.745 kb on + strand at 773.745 kb on + strand at 773.753 kb on - strand at 773.795 kb on - strand at 773.805 kb on - strand at 773.836 kb on + strand at 773.836 kb on + strand at 773.844 kb on - strand at 773.844 kb on - strand at 773.872 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 0.5 mM remove 772,424 + +0.4 772,465 + +1.0 772,599 + Dshi_0763 0.30 -3.2 772,624 - Dshi_0763 0.37 -1.5 772,699 - Dshi_0763 0.56 -0.3 772,718 - Dshi_0763 0.61 +0.1 772,749 + Dshi_0763 0.68 -0.7 772,789 + Dshi_0763 0.79 -0.5 772,806 - Dshi_0763 0.83 -1.4 772,894 - -0.8 773,151 + +0.1 773,164 - -1.2 773,171 + +0.3 773,209 - +0.6 773,443 + +0.1 773,495 - Dshi_0765 0.43 -1.4 773,566 + Dshi_0765 0.57 -1.9 773,621 + Dshi_0765 0.68 -1.2 773,745 + +0.5 773,745 + -0.9 773,745 + -1.7 773,753 - -0.8 773,795 - -1.2 773,805 - +0.4 773,836 + +0.3 773,836 + +1.1 773,844 - -0.7 773,844 - -0.3 773,872 - -0.1
Or see this region's nucleotide sequence