Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5709

Experiment: LB no stress 48 hours

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB no stress 48 hours
6,525,152	+		Pf6N2E2_5708	0.22	+0.1
6,525,152	+		Pf6N2E2_5708	0.22	+0.5
6,525,152	+		Pf6N2E2_5708	0.22	+0.2
6,525,153	-		Pf6N2E2_5708	0.22	-0.7
6,525,153	-		Pf6N2E2_5708	0.22	-0.5
6,525,153	-		Pf6N2E2_5708	0.22	-1.4
6,525,209	+		Pf6N2E2_5708	0.27	+0.1
6,525,245	+		Pf6N2E2_5708	0.30	-0.0
6,525,245	+		Pf6N2E2_5708	0.30	+0.2
6,525,245	+		Pf6N2E2_5708	0.30	+1.4
6,525,245	+		Pf6N2E2_5708	0.30	+0.6
6,525,245	+		Pf6N2E2_5708	0.30	-0.9
6,525,246	-		Pf6N2E2_5708	0.30	-1.4
6,525,311	+		Pf6N2E2_5708	0.36	-0.6
6,525,311	+		Pf6N2E2_5708	0.36	-0.9
6,525,312	-		Pf6N2E2_5708	0.36	+1.5
6,525,312	-		Pf6N2E2_5708	0.36	-0.8
6,525,590	+		Pf6N2E2_5708	0.59	+0.2
6,525,590	+		Pf6N2E2_5708	0.59	+0.1
6,525,590	+		Pf6N2E2_5708	0.59	+0.2
6,525,590	+		Pf6N2E2_5708	0.59	-0.6
6,525,590	+		Pf6N2E2_5708	0.59	-0.7
6,525,591	-		Pf6N2E2_5708	0.59	+0.2
6,525,591	-		Pf6N2E2_5708	0.59	+0.9
6,525,591	-		Pf6N2E2_5708	0.59	-0.2
6,525,591	-		Pf6N2E2_5708	0.59	+1.3
6,525,596	+		Pf6N2E2_5708	0.60	+2.5
6,525,597	-		Pf6N2E2_5708	0.60	-0.9
6,525,597	-		Pf6N2E2_5708	0.60	+0.8
6,525,597	-		Pf6N2E2_5708	0.60	+1.0
6,525,597	-		Pf6N2E2_5708	0.60	-0.6
6,525,597	-		Pf6N2E2_5708	0.60	+0.4
6,525,597	-		Pf6N2E2_5708	0.60	-0.5
6,525,599	+		Pf6N2E2_5708	0.60	+0.2
6,525,599	+		Pf6N2E2_5708	0.60	-0.1
6,525,599	+		Pf6N2E2_5708	0.60	+1.1
6,525,600	-		Pf6N2E2_5708	0.60	-0.4
6,525,600	-		Pf6N2E2_5708	0.60	-1.2
6,525,604	+		Pf6N2E2_5708	0.61	-0.2
6,525,736	+		Pf6N2E2_5708	0.72	+0.8
6,525,736	+		Pf6N2E2_5708	0.72	+0.8
6,525,737	-		Pf6N2E2_5708	0.72	-0.7
6,525,737	-		Pf6N2E2_5708	0.72	-0.9
6,525,737	-		Pf6N2E2_5708	0.72	+0.1
6,525,861	+		Pf6N2E2_5708	0.82	+0.6
6,525,861	+		Pf6N2E2_5708	0.82	-0.7
6,525,862	-		Pf6N2E2_5708	0.82	+0.9
6,525,967	+				-1.1
6,526,021	+				+1.5
6,526,022	-				-0.7
6,526,022	-				-1.6
6,526,067	+				+0.4
6,526,067	+				-0.4
6,526,068	-				-0.8
6,526,068	-				+0.1
6,526,120	+				-0.8
6,526,120	+				-0.1
6,526,121	-				-0.2
6,526,154	+				+0.1
6,526,154	+				+0.3
6,526,154	+				+0.8
6,526,155	-				+0.8
6,526,155	-				+0.7
6,526,155	-				-0.4
6,526,155	-				+0.7
6,526,177	+		Pf6N2E2_5709	0.12	+0.7
6,526,177	+		Pf6N2E2_5709	0.12	-0.3
6,526,252	+		Pf6N2E2_5709	0.27	+0.7
6,526,252	+		Pf6N2E2_5709	0.27	+0.9
6,526,252	+		Pf6N2E2_5709	0.27	-0.4
6,526,252	+		Pf6N2E2_5709	0.27	+1.2
6,526,252	+		Pf6N2E2_5709	0.27	+0.8
6,526,252	+		Pf6N2E2_5709	0.27	+1.3
6,526,253	-		Pf6N2E2_5709	0.27	+0.3
6,526,253	-		Pf6N2E2_5709	0.27	+1.2
6,526,253	-		Pf6N2E2_5709	0.27	-0.2
6,526,253	-		Pf6N2E2_5709	0.27	+0.8
6,526,259	-		Pf6N2E2_5709	0.28	+1.4
6,526,311	+		Pf6N2E2_5709	0.39	-0.0
6,526,311	+		Pf6N2E2_5709	0.39	+0.6
6,526,312	-		Pf6N2E2_5709	0.39	-0.4
6,526,318	+		Pf6N2E2_5709	0.40	+1.2
6,526,319	-		Pf6N2E2_5709	0.40	+0.2
6,526,319	-		Pf6N2E2_5709	0.40	+2.3
6,526,576	+				-0.6
6,526,641	-				+0.3
6,526,762	+				+0.9
6,526,763	-				-0.7
6,526,763	-				-0.1
6,526,794	+				-0.1
6,526,796	+				-0.8
6,526,796	+				+0.5
6,526,797	-				+0.3
6,526,797	-				-0.8
6,526,940	+		Pf6N2E2_5710	0.26	+0.0
6,526,940	+		Pf6N2E2_5710	0.26	-0.2
6,526,940	+		Pf6N2E2_5710	0.26	-0.6
6,526,940	+		Pf6N2E2_5710	0.26	+0.6
6,526,940	+		Pf6N2E2_5710	0.26	-0.6
6,526,940	+		Pf6N2E2_5710	0.26	+0.9
6,526,941	-		Pf6N2E2_5710	0.26	+0.2
6,526,941	-		Pf6N2E2_5710	0.26	+0.5
6,526,941	-		Pf6N2E2_5710	0.26	+1.1
6,526,941	-		Pf6N2E2_5710	0.26	+0.5
6,526,941	-		Pf6N2E2_5710	0.26	+0.8
6,526,941	-		Pf6N2E2_5710	0.26	+0.0
6,526,941	-		Pf6N2E2_5710	0.26	+1.2
6,526,941	-		Pf6N2E2_5710	0.26	-0.3
6,526,941	-		Pf6N2E2_5710	0.26	+0.1
6,526,949	+		Pf6N2E2_5710	0.27	-0.4
6,526,949	+		Pf6N2E2_5710	0.27	+0.4
6,526,950	-		Pf6N2E2_5710	0.27	+0.6
6,526,950	-		Pf6N2E2_5710	0.27	-0.5
6,526,950	-		Pf6N2E2_5710	0.27	+0.4
6,526,959	-		Pf6N2E2_5710	0.29	-0.4
6,527,048	+		Pf6N2E2_5710	0.43	-1.0
6,527,048	+				+1.5
6,527,048	+		Pf6N2E2_5710	0.43	-0.4
6,527,049	-		Pf6N2E2_5710	0.44	-2.1
6,527,049	-		Pf6N2E2_5710	0.44	+1.0
6,527,049	-		Pf6N2E2_5710	0.44	-0.0
6,527,093	+		Pf6N2E2_5710	0.51	-1.1
6,527,093	+		Pf6N2E2_5710	0.51	-0.2
6,527,093	+		Pf6N2E2_5710	0.51	-0.5
6,527,093	+		Pf6N2E2_5710	0.51	-0.5
6,527,093	+		Pf6N2E2_5710	0.51	-0.0
6,527,093	+		Pf6N2E2_5710	0.51	-1.1
6,527,094	-		Pf6N2E2_5710	0.51	-1.1
6,527,094	-		Pf6N2E2_5710	0.51	+0.4
6,527,094	-		Pf6N2E2_5710	0.51	+1.9
6,527,094	-		Pf6N2E2_5710	0.51	-0.3
6,527,094	-		Pf6N2E2_5710	0.51	+0.2
6,527,094	-		Pf6N2E2_5710	0.51	+0.5
6,527,094	-		Pf6N2E2_5710	0.51	+0.4
6,527,297	+		Pf6N2E2_5710	0.85	-1.1
6,527,297	+		Pf6N2E2_5710	0.85	+0.7
6,527,297	+		Pf6N2E2_5710	0.85	+0.8
6,527,297	+		Pf6N2E2_5710	0.85	-0.3
6,527,297	+		Pf6N2E2_5710	0.85	+1.6
6,527,297	+		Pf6N2E2_5710	0.85	-0.7
6,527,297	+		Pf6N2E2_5710	0.85	-0.7
6,527,298	-		Pf6N2E2_5710	0.85	+0.8
6,527,298	-		Pf6N2E2_5710	0.85	+0.3
6,527,298	-		Pf6N2E2_5710	0.85	+0.8
6,527,298	-		Pf6N2E2_5710	0.85	-0.1
6,527,298	-		Pf6N2E2_5710	0.85	+0.3
6,527,298	-		Pf6N2E2_5710	0.85	-1.9
6,527,388	+				+0.9
6,527,388	+				+0.3
6,527,389	-				-0.1
6,527,458	+				-1.2
6,527,458	+				+1.1
6,527,458	+				+0.3
6,527,458	+				+0.4
6,527,458	+				-0.2
6,527,459	-				-1.3
6,527,459	-				+0.4
6,527,459	-				+0.7
6,527,468	+				-0.6
6,527,468	+				+0.9
6,527,468	+				-0.4
6,527,468	+				-0.3
6,527,468	+				+1.3
6,527,468	+				+0.5
6,527,468	+				-0.1
6,527,469	-				+1.3
6,527,469	-				-1.1
6,527,469	-				-0.0
6,527,469	-				-0.6
6,527,469	-				+0.6
6,527,469	-				-1.0
6,527,469	-				+0.0
6,527,547	+				-0.3
6,527,584	+				+0.3
6,527,585	-				+1.0