Experiment: LB no stress 48 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4459 and Pf6N2E2_4460 are separated by 82 nucleotides Pf6N2E2_4460 and Pf6N2E2_4461 are separated by 241 nucleotides
Pf6N2E2_4459 - Transcriptional regulator, GntR family, at 5,191,284 to 5,191,991
_4459
Pf6N2E2_4460 - Thioredoxin, at 5,192,074 to 5,192,442
_4460
Pf6N2E2_4461 - Transcription termination factor Rho, at 5,192,684 to 5,193,943
_4461
Position (kb) 5192
5193 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5191.190 kb on + strand at 5191.191 kb on - strand at 5191.239 kb on - strand at 5191.239 kb on - strand at 5191.239 kb on - strand at 5191.244 kb on + strand at 5191.244 kb on + strand at 5191.244 kb on + strand at 5191.244 kb on + strand at 5191.244 kb on + strand at 5191.244 kb on + strand at 5191.244 kb on + strand at 5191.244 kb on + strand at 5191.245 kb on - strand at 5191.245 kb on - strand at 5191.572 kb on - strand, within Pf6N2E2_4459 at 5191.822 kb on + strand, within Pf6N2E2_4459 at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.936 kb on + strand at 5191.937 kb on - strand at 5191.937 kb on - strand at 5191.937 kb on - strand at 5191.937 kb on - strand at 5191.937 kb on - strand at 5191.937 kb on - strand at 5191.937 kb on - strand at 5191.937 kb on - strand at 5191.937 kb on - strand at 5191.937 kb on - strand at 5191.937 kb on - strand at 5191.937 kb on - strand at 5191.937 kb on - strand at 5191.937 kb on - strand at 5191.937 kb on - strand at 5191.937 kb on - strand at 5191.937 kb on - strand at 5191.940 kb on + strand at 5191.940 kb on + strand at 5191.999 kb on + strand at 5191.999 kb on + strand at 5191.999 kb on + strand at 5192.000 kb on - strand at 5192.000 kb on - strand at 5192.000 kb on - strand at 5192.000 kb on - strand at 5192.000 kb on - strand at 5192.009 kb on + strand at 5192.009 kb on + strand at 5192.009 kb on + strand at 5192.009 kb on + strand at 5192.009 kb on + strand at 5192.009 kb on + strand at 5192.010 kb on - strand at 5192.023 kb on + strand at 5192.440 kb on + strand at 5192.440 kb on + strand at 5192.440 kb on + strand at 5192.440 kb on + strand at 5192.440 kb on + strand at 5192.440 kb on + strand at 5192.440 kb on + strand at 5192.440 kb on + strand at 5192.441 kb on - strand at 5192.441 kb on - strand at 5192.441 kb on - strand at 5192.441 kb on - strand at 5192.441 kb on - strand at 5192.524 kb on + strand at 5192.591 kb on + strand at 5192.591 kb on + strand at 5192.591 kb on + strand at 5192.591 kb on + strand at 5192.591 kb on + strand at 5192.595 kb on + strand at 5192.595 kb on + strand at 5192.595 kb on + strand at 5192.646 kb on + strand at 5192.662 kb on + strand at 5192.670 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress 48 hours remove 5,191,190 + -1.0 5,191,191 - -2.4 5,191,239 - -0.3 5,191,239 - +0.4 5,191,239 - -0.7 5,191,244 + +0.1 5,191,244 + +0.6 5,191,244 + -1.4 5,191,244 + +1.0 5,191,244 + +0.4 5,191,244 + -0.3 5,191,244 + +2.8 5,191,244 + -0.0 5,191,245 - -0.7 5,191,245 - -1.2 5,191,572 - Pf6N2E2_4459 0.41 +1.4 5,191,822 + Pf6N2E2_4459 0.76 +1.1 5,191,936 + +0.1 5,191,936 + -1.1 5,191,936 + +0.1 5,191,936 + +0.0 5,191,936 + +0.4 5,191,936 + -0.8 5,191,936 + -0.8 5,191,936 + +0.5 5,191,936 + -0.1 5,191,936 + -0.5 5,191,936 + +0.9 5,191,936 + +1.0 5,191,936 + -0.1 5,191,936 + -0.2 5,191,936 + -0.9 5,191,936 + +0.0 5,191,936 + +0.2 5,191,936 + -0.2 5,191,936 + -0.8 5,191,936 + +1.0 5,191,936 + -2.5 5,191,936 + -0.8 5,191,936 + +0.1 5,191,937 - -1.8 5,191,937 - -1.3 5,191,937 - +1.3 5,191,937 - -0.3 5,191,937 - -1.4 5,191,937 - -0.1 5,191,937 - +0.2 5,191,937 - -1.2 5,191,937 - +0.8 5,191,937 - +0.4 5,191,937 - +1.8 5,191,937 - -0.8 5,191,937 - +0.2 5,191,937 - +0.2 5,191,937 - +0.9 5,191,937 - -0.3 5,191,937 - +0.9 5,191,940 + -0.7 5,191,940 + +1.1 5,191,999 + +0.1 5,191,999 + +0.2 5,191,999 + +0.3 5,192,000 - -0.1 5,192,000 - +0.4 5,192,000 - -0.2 5,192,000 - -1.8 5,192,000 - +1.2 5,192,009 + +0.1 5,192,009 + +0.0 5,192,009 + -0.5 5,192,009 + +0.1 5,192,009 + +0.5 5,192,009 + +0.2 5,192,010 - +0.7 5,192,023 + +0.5 5,192,440 + -0.0 5,192,440 + -0.2 5,192,440 + +0.1 5,192,440 + -1.1 5,192,440 + +0.7 5,192,440 + -0.5 5,192,440 + -1.9 5,192,440 + +0.2 5,192,441 - -1.8 5,192,441 - -1.0 5,192,441 - -0.6 5,192,441 - +0.1 5,192,441 - +0.9 5,192,524 + +2.5 5,192,591 + +0.6 5,192,591 + -0.8 5,192,591 + +0.9 5,192,591 + +1.4 5,192,591 + +0.2 5,192,595 + -1.2 5,192,595 + +0.7 5,192,595 + +0.1 5,192,646 + -1.4 5,192,662 + +0.3 5,192,670 + +0.3
Or see this region's nucleotide sequence