Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4263

Experiment: LB no stress 48 hours

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB no stress 48 hours
4,960,442	+		Pf6N2E2_4262	0.71	-0.4
4,960,442	+		Pf6N2E2_4262	0.71	-1.3
4,960,442	+		Pf6N2E2_4262	0.71	+0.2
4,960,442	+		Pf6N2E2_4262	0.71	-0.2
4,960,442	+		Pf6N2E2_4262	0.71	-0.8
4,960,442	+		Pf6N2E2_4262	0.71	+0.6
4,960,442	+		Pf6N2E2_4262	0.71	+1.9
4,960,442	+		Pf6N2E2_4262	0.71	-1.5
4,960,443	-		Pf6N2E2_4262	0.71	-0.2
4,960,450	+		Pf6N2E2_4262	0.72	-2.2
4,960,451	-		Pf6N2E2_4262	0.72	-0.4
4,960,451	-		Pf6N2E2_4262	0.72	+1.3
4,960,479	-		Pf6N2E2_4262	0.75	+0.1
4,960,523	+		Pf6N2E2_4262	0.80	-0.4
4,960,523	+		Pf6N2E2_4262	0.80	+1.2
4,960,569	+		Pf6N2E2_4262	0.86	+0.5
4,960,569	+		Pf6N2E2_4262	0.86	-0.6
4,960,569	+		Pf6N2E2_4262	0.86	+0.0
4,960,570	-		Pf6N2E2_4262	0.86	-1.4
4,960,570	-		Pf6N2E2_4262	0.86	+0.5
4,960,571	+		Pf6N2E2_4262	0.86	-1.3
4,960,572	-		Pf6N2E2_4262	0.86	+0.2
4,960,572	-		Pf6N2E2_4262	0.86	+0.1
4,960,572	-		Pf6N2E2_4262	0.86	+1.0
4,960,582	+		Pf6N2E2_4262	0.88	+0.8
4,960,582	+		Pf6N2E2_4262	0.88	+0.1
4,960,582	+		Pf6N2E2_4262	0.88	+0.7
4,960,582	+		Pf6N2E2_4262	0.88	+0.4
4,960,582	+		Pf6N2E2_4262	0.88	+0.1
4,960,582	+		Pf6N2E2_4262	0.88	-0.3
4,960,582	+		Pf6N2E2_4262	0.88	+0.2
4,960,582	+		Pf6N2E2_4262	0.88	+0.8
4,960,582	+		Pf6N2E2_4262	0.88	+0.3
4,960,582	+		Pf6N2E2_4262	0.88	+1.3
4,960,582	+		Pf6N2E2_4262	0.88	-0.3
4,960,582	+		Pf6N2E2_4262	0.88	-0.7
4,960,582	+		Pf6N2E2_4262	0.88	+0.4
4,960,582	+		Pf6N2E2_4262	0.88	+0.2
4,960,582	+		Pf6N2E2_4262	0.88	-0.3
4,960,583	-		Pf6N2E2_4262	0.88	-0.5
4,960,583	-		Pf6N2E2_4262	0.88	-0.0
4,960,583	-		Pf6N2E2_4262	0.88	-0.4
4,960,583	-		Pf6N2E2_4262	0.88	+0.5
4,960,583	-		Pf6N2E2_4262	0.88	+0.2
4,960,583	-		Pf6N2E2_4262	0.88	+0.6
4,960,583	-		Pf6N2E2_4262	0.88	+0.6
4,960,583	-		Pf6N2E2_4262	0.88	-0.4
4,960,583	-		Pf6N2E2_4262	0.88	+0.2
4,960,583	-		Pf6N2E2_4262	0.88	+0.2
4,960,583	-		Pf6N2E2_4262	0.88	-0.2
4,960,583	-		Pf6N2E2_4262	0.88	+0.9
4,960,583	-		Pf6N2E2_4262	0.88	-0.8
4,960,874	-				+0.5
4,960,913	+				-0.0
4,960,914	-				-0.4
4,960,914	-				-0.9
4,960,914	-				-0.3
4,960,914	-				-0.3
4,960,914	-				-0.8
4,961,091	+				-0.3
4,961,091	+				-1.2
4,961,092	-				+2.2
4,961,092	-				-0.1
4,961,092	-				-0.5
4,961,092	-				+0.4
4,961,095	+				+0.9
4,961,095	+				+1.1
4,961,095	+				-2.0
4,961,095	+				+0.3
4,961,095	+				+1.7
4,961,096	-				+1.0
4,961,096	-				-0.4
4,961,096	-				+1.0
4,961,096	-				-0.4
4,961,096	-				+0.1
4,961,096	-				+0.1
4,961,099	+				+0.7
4,961,099	+				-0.5
4,961,100	-				-1.5
4,961,124	-				-1.0
4,961,124	-				+0.0
4,961,125	+				+0.4
4,961,125	+				+0.2
4,961,125	+				+0.2
4,961,125	+				+0.2
4,961,125	+				+1.1
4,961,125	+				+0.3
4,961,125	+				-0.9
4,961,125	+				-0.2
4,961,125	+				-0.6
4,961,125	+				-0.5
4,961,125	+				-0.1
4,961,125	+				+0.2
4,961,126	-				-0.4
4,961,126	-				-0.0
4,961,126	-				-1.4
4,961,126	-				+1.1
4,961,126	-				-1.6
4,961,126	-				+1.0
4,961,126	-				+1.9
4,961,126	-				-0.3
4,961,169	-				-0.6
4,961,384	+				+0.7
4,961,384	+				-0.3
4,961,384	+				+0.3
4,961,384	+				+0.8
4,961,384	+				+0.4
4,961,385	-				+2.1
4,961,385	-				+0.3
4,961,385	-				+0.0
4,961,386	+				+1.1
4,961,386	+				+0.3
4,961,386	+				+0.5
4,961,386	+				-0.5
4,961,386	+				+1.3
4,961,386	+				+0.6
4,961,386	+				-0.6
4,961,386	+				+0.3
4,961,386	+				+0.7
4,961,386	+				-0.3
4,961,386	+				-0.6
4,961,386	+				+1.2
4,961,386	+				-0.6
4,961,386	+				+0.1
4,961,386	+				+1.0
4,961,386	+				-1.3
4,961,386	+				+0.7
4,961,387	-				+0.9
4,961,387	-				-0.0
4,961,387	-				+0.4
4,961,387	-				+0.5
4,961,387	-				+0.1
4,961,387	-				-1.8
4,961,387	-				+1.1
4,961,387	-				+0.3
4,961,387	-				+0.5
4,961,387	-				-0.3
4,961,487	-				+0.7
4,961,511	+				+0.1
4,961,511	+				+0.6
4,961,675	-		Pf6N2E2_4263	0.23	-0.8
4,961,824	+		Pf6N2E2_4263	0.36	-0.0
4,962,151	+		Pf6N2E2_4263	0.63	-0.8
4,962,152	-		Pf6N2E2_4263	0.63	-0.7
4,962,152	-		Pf6N2E2_4263	0.63	-0.9
4,962,665	-		Pf6N2E2_4264	0.10	+0.2
4,962,861	+		Pf6N2E2_4264	0.40	+1.0
4,962,861	+		Pf6N2E2_4264	0.40	+0.5
4,962,862	-		Pf6N2E2_4264	0.40	+1.4
4,962,862	-		Pf6N2E2_4264	0.40	+0.8
4,962,913	+		Pf6N2E2_4264	0.48	-0.1
4,962,991	+		Pf6N2E2_4264	0.60	-1.4
4,963,014	+		Pf6N2E2_4264	0.64	-0.2
4,963,014	+		Pf6N2E2_4264	0.64	+0.2
4,963,014	+		Pf6N2E2_4264	0.64	-0.8
4,963,014	+		Pf6N2E2_4264	0.64	+0.3
4,963,014	+		Pf6N2E2_4264	0.64	-0.5
4,963,014	+		Pf6N2E2_4264	0.64	-0.8
4,963,015	-		Pf6N2E2_4264	0.64	-1.5
4,963,015	-		Pf6N2E2_4264	0.64	+1.3
4,963,015	-		Pf6N2E2_4264	0.64	-1.1
4,963,015	-		Pf6N2E2_4264	0.64	-0.6
4,963,142	+		Pf6N2E2_4264	0.83	+0.3
4,963,143	-		Pf6N2E2_4264	0.83	-0.2
4,963,228	+				-0.6
4,963,228	+				+0.7
4,963,228	+				+0.3
4,963,229	-				+0.2
4,963,229	-				-0.5
4,963,229	-				-0.3
4,963,248	+				+0.5
4,963,299	+		Pf6N2E2_4265	0.15	-0.0
4,963,326	+		Pf6N2E2_4265	0.22	-0.2
4,963,326	+		Pf6N2E2_4265	0.22	-0.4
4,963,326	+		Pf6N2E2_4265	0.22	-0.6
4,963,326	+		Pf6N2E2_4265	0.22	-0.7
4,963,327	-		Pf6N2E2_4265	0.23	-0.1
4,963,327	-		Pf6N2E2_4265	0.23	+0.9
4,963,351	+		Pf6N2E2_4265	0.29	+0.2
4,963,351	+		Pf6N2E2_4265	0.29	-1.2
4,963,351	+		Pf6N2E2_4265	0.29	+1.3
4,963,351	+		Pf6N2E2_4265	0.29	-0.4
4,963,352	-		Pf6N2E2_4265	0.30	-0.7
4,963,410	+		Pf6N2E2_4265	0.46	+0.5
4,963,410	+		Pf6N2E2_4265	0.46	-0.0
4,963,410	+		Pf6N2E2_4265	0.46	+0.5
4,963,410	+		Pf6N2E2_4265	0.46	+0.5
4,963,410	+		Pf6N2E2_4265	0.46	-0.3
4,963,411	-		Pf6N2E2_4265	0.46	+0.0
4,963,411	-		Pf6N2E2_4265	0.46	-0.7
4,963,411	-		Pf6N2E2_4265	0.46	+0.7
4,963,411	-		Pf6N2E2_4265	0.46	-0.1
4,963,411	-		Pf6N2E2_4265	0.46	+0.1
4,963,600	+				+0.8
4,963,600	+				+0.1
4,963,600	+				-0.6