Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2718

Experiment: LB no stress 48 hours

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB no stress 48 hours
3,209,313	-				-0.0
3,209,313	-				-0.3
3,209,313	-				+0.1
3,209,463	+		Pf6N2E2_2717	0.28	+0.6
3,209,464	-		Pf6N2E2_2717	0.28	-0.2
3,209,595	+		Pf6N2E2_2717	0.63	-1.4
3,209,596	-		Pf6N2E2_2717	0.63	-0.2
3,209,623	-		Pf6N2E2_2717	0.71	-0.2
3,209,638	-		Pf6N2E2_2717	0.75	+0.5
3,209,638	-		Pf6N2E2_2717	0.75	-0.4
3,209,731	-				-0.5
3,209,756	+				+0.8
3,209,757	-				-0.4
3,209,757	-				-0.5
3,209,757	-				+0.5
3,209,905	+				+0.8
3,209,917	+				+0.4
3,209,917	+				+0.2
3,209,918	-				+0.2
3,209,918	-				+0.4
3,209,959	+				+2.0
3,209,986	+				-1.0
3,209,986	+				-1.3
3,209,986	+				-0.5
3,209,986	+				-0.3
3,209,987	-				+0.5
3,209,987	-				-0.2
3,210,099	+				+2.8
3,210,099	+				+0.4
3,210,099	+				-0.8
3,210,099	+				-0.0
3,210,099	+				+0.5
3,210,100	-				-1.8
3,210,100	-				-0.0
3,210,100	-				-0.9
3,210,100	-				+0.4
3,210,100	-				-0.2
3,210,100	-				+0.8
3,210,100	-				-2.4
3,210,100	-				+1.1
3,210,100	-				-1.2
3,210,100	-				-0.9
3,210,100	-				+0.1
3,210,100	-				-0.5
3,210,131	+				-0.5
3,210,131	+				-1.4
3,210,131	+				-0.2
3,210,132	-				-1.3
3,210,192	+				-0.1
3,210,192	+				-0.3
3,210,192	+				+0.2
3,210,192	+				-0.0
3,210,192	+				+0.3
3,210,192	+				+1.0
3,210,192	+				+1.5
3,210,193	-				+1.2
3,210,193	-				-0.4
3,210,193	-				-1.7
3,210,208	+				-0.6
3,210,208	+				-0.0
3,210,208	+				-0.7
3,210,208	+				-0.3
3,210,208	+				+0.4
3,210,209	-				-0.4
3,210,209	-				-1.4
3,210,209	-				-1.6
3,210,209	-				+1.2
3,210,361	+				+0.5
3,210,361	+				-0.8
3,210,362	-				-0.9
3,210,362	-				+0.9
3,210,362	-				-1.0
3,210,672	+		Pf6N2E2_2718	0.17	-0.9
3,210,673	-		Pf6N2E2_2718	0.17	-0.7
3,210,718	+		Pf6N2E2_2718	0.20	-0.6
3,210,718	+		Pf6N2E2_2718	0.20	+1.0
3,210,724	+		Pf6N2E2_2718	0.20	-0.5
3,210,724	+		Pf6N2E2_2718	0.20	-1.9
3,210,724	+		Pf6N2E2_2718	0.20	+0.2
3,210,724	+		Pf6N2E2_2718	0.20	-1.0
3,210,724	+		Pf6N2E2_2718	0.20	-0.5
3,210,725	-		Pf6N2E2_2718	0.20	-1.4
3,210,725	-		Pf6N2E2_2718	0.20	-0.2
3,210,725	-		Pf6N2E2_2718	0.20	-1.2
3,210,725	-		Pf6N2E2_2718	0.20	+0.5
3,210,829	-		Pf6N2E2_2718	0.25	-0.3
3,210,829	-		Pf6N2E2_2718	0.25	+0.1
3,211,023	+		Pf6N2E2_2718	0.34	+0.4
3,211,023	+		Pf6N2E2_2718	0.34	-0.1
3,211,024	-		Pf6N2E2_2718	0.34	+0.7
3,211,024	-				+1.8
3,211,029	-		Pf6N2E2_2718	0.34	+0.0
3,211,137	+		Pf6N2E2_2718	0.39	-3.3
3,211,137	+		Pf6N2E2_2718	0.39	+0.3
3,211,138	-		Pf6N2E2_2718	0.39	-1.1
3,211,230	+		Pf6N2E2_2718	0.43	-0.2
3,211,230	+		Pf6N2E2_2718	0.43	+1.1
3,211,261	+		Pf6N2E2_2718	0.45	-2.2
3,211,261	+		Pf6N2E2_2718	0.45	-1.0
3,211,292	+		Pf6N2E2_2718	0.46	-0.9
3,211,320	-		Pf6N2E2_2718	0.47	+0.5
3,211,487	+		Pf6N2E2_2718	0.55	-0.6
3,211,487	+		Pf6N2E2_2718	0.55	-0.7
3,211,487	+		Pf6N2E2_2718	0.55	-0.5
3,211,488	-		Pf6N2E2_2718	0.55	-0.2
3,211,488	-		Pf6N2E2_2718	0.55	-0.1
3,211,488	-		Pf6N2E2_2718	0.55	+0.4
3,211,488	-		Pf6N2E2_2718	0.55	-0.9
3,211,515	+		Pf6N2E2_2718	0.56	+0.7
3,211,516	-		Pf6N2E2_2718	0.57	-2.8
3,211,848	+		Pf6N2E2_2718	0.72	+0.1
3,211,848	+		Pf6N2E2_2718	0.72	+0.2
3,211,848	+		Pf6N2E2_2718	0.72	+0.2
3,211,848	+		Pf6N2E2_2718	0.72	-0.1
3,211,849	-		Pf6N2E2_2718	0.72	+0.2
3,211,849	-		Pf6N2E2_2718	0.72	-0.0
3,211,852	+		Pf6N2E2_2718	0.72	-0.3
3,211,852	+		Pf6N2E2_2718	0.72	-0.7
3,211,852	+		Pf6N2E2_2718	0.72	-0.4
3,211,852	+		Pf6N2E2_2718	0.72	-0.1
3,211,853	-		Pf6N2E2_2718	0.72	+1.3
3,211,853	-		Pf6N2E2_2718	0.72	+0.4
3,211,853	-		Pf6N2E2_2718	0.72	+0.9
3,211,853	-		Pf6N2E2_2718	0.72	-0.5
3,211,853	-		Pf6N2E2_2718	0.72	+0.1
3,211,853	-		Pf6N2E2_2718	0.72	-0.8
3,211,853	-		Pf6N2E2_2718	0.72	+1.2
3,211,853	-		Pf6N2E2_2718	0.72	-1.1
3,211,853	-		Pf6N2E2_2718	0.72	-0.3
3,211,853	-		Pf6N2E2_2718	0.72	-0.9
3,211,853	-		Pf6N2E2_2718	0.72	+0.0
3,211,853	-		Pf6N2E2_2718	0.72	+1.4
3,211,853	-		Pf6N2E2_2718	0.72	-0.4
3,211,872	-		Pf6N2E2_2718	0.73	+0.3
3,212,150	+		Pf6N2E2_2718	0.86	-0.8
3,212,150	+		Pf6N2E2_2718	0.86	-1.5
3,212,166	+		Pf6N2E2_2718	0.87	-1.4
3,212,167	-		Pf6N2E2_2718	0.87	+0.6
3,212,210	+		Pf6N2E2_2718	0.89	+1.4
3,212,211	-		Pf6N2E2_2718	0.89	+0.2
3,212,265	+				-0.1
3,212,302	+				-0.8
3,212,302	+				+0.2
3,212,303	-				-1.2
3,212,303	-				+1.8
3,212,304	+				-0.9
3,212,304	+				+0.4
3,212,304	+				-0.8
3,212,304	+				-2.4
3,212,305	-				-1.1
3,212,317	-				-2.8
3,212,436	+				+1.5
3,212,452	+				+0.2
3,212,453	-				+0.8
3,212,453	-				+1.7
3,212,553	-				-0.7
3,212,553	-				-0.4
3,212,567	+		Pf6N2E2_2719	0.11	+0.0
3,212,567	+		Pf6N2E2_2719	0.11	-0.3
3,212,568	-		Pf6N2E2_2719	0.11	-0.5
3,212,568	-		Pf6N2E2_2719	0.11	+0.5
3,212,568	-		Pf6N2E2_2719	0.11	-0.1
3,212,568	-		Pf6N2E2_2719	0.11	+0.5
3,212,568	-		Pf6N2E2_2719	0.11	-0.3
3,212,568	-		Pf6N2E2_2719	0.11	+0.3
3,212,568	-		Pf6N2E2_2719	0.11	-1.0
3,212,569	+		Pf6N2E2_2719	0.11	-0.8
3,212,569	+		Pf6N2E2_2719	0.11	+0.3
3,212,570	-		Pf6N2E2_2719	0.11	-0.6
3,212,570	-		Pf6N2E2_2719	0.11	+0.3
3,212,605	+		Pf6N2E2_2719	0.22	+0.1
3,212,605	+		Pf6N2E2_2719	0.22	-0.4
3,212,605	+		Pf6N2E2_2719	0.22	-1.5
3,212,605	+		Pf6N2E2_2719	0.22	+0.2
3,212,605	+		Pf6N2E2_2719	0.22	+0.2
3,212,606	-		Pf6N2E2_2719	0.22	-0.5
3,212,640	-		Pf6N2E2_2719	0.32	+0.8
3,212,652	-		Pf6N2E2_2719	0.36	+0.3
3,212,652	-		Pf6N2E2_2719	0.36	-0.1
3,212,670	-		Pf6N2E2_2719	0.41	+2.8
3,212,689	+		Pf6N2E2_2719	0.47	+0.2
3,212,696	-		Pf6N2E2_2719	0.49	-0.2
3,212,737	+		Pf6N2E2_2719	0.62	-0.7
3,212,737	+		Pf6N2E2_2719	0.62	-0.8
3,212,738	-		Pf6N2E2_2719	0.62	+0.0
3,213,014	+				-0.6
3,213,014	+				-0.1
3,213,017	-				-0.4
3,213,017	-				+0.5
3,213,064	+				+0.3
3,213,065	-				-1.5
3,213,065	-				-0.9
3,213,066	+				-0.1
3,213,066	+				+0.6
3,213,066	+				-0.8
3,213,066	+				-0.3
3,213,067	-				+0.4
3,213,067	-				+0.4
3,213,136	+		Pf6N2E2_2720	0.18	+0.7
3,213,157	+		Pf6N2E2_2720	0.23	-0.1
3,213,157	+		Pf6N2E2_2720	0.23	-0.1
3,213,158	-		Pf6N2E2_2720	0.23	-1.6
3,213,158	-		Pf6N2E2_2720	0.23	+0.7
3,213,172	+		Pf6N2E2_2720	0.26	+0.8
3,213,173	-		Pf6N2E2_2720	0.26	-0.2
3,213,217	+		Pf6N2E2_2720	0.36	+0.6
3,213,217	+		Pf6N2E2_2720	0.36	-0.2
3,213,218	-		Pf6N2E2_2720	0.36	+0.1
3,213,322	+		Pf6N2E2_2720	0.58	+0.4
3,213,322	+		Pf6N2E2_2720	0.58	+0.3
3,213,322	+		Pf6N2E2_2720	0.58	+1.2
3,213,323	-		Pf6N2E2_2720	0.58	-0.4
3,213,323	-		Pf6N2E2_2720	0.58	-0.7
3,213,323	-		Pf6N2E2_2720	0.58	+1.0
3,213,412	+		Pf6N2E2_2720	0.77	-0.5
3,213,412	+		Pf6N2E2_2720	0.77	-1.2
3,213,412	+		Pf6N2E2_2720	0.77	+0.5
3,213,412	+		Pf6N2E2_2720	0.77	-0.2
3,213,412	+		Pf6N2E2_2720	0.77	-0.3
3,213,412	+		Pf6N2E2_2720	0.77	-0.2
3,213,413	-		Pf6N2E2_2720	0.77	-0.2
3,213,413	-		Pf6N2E2_2720	0.77	+0.8
3,213,413	-		Pf6N2E2_2720	0.77	+0.3
3,213,413	-		Pf6N2E2_2720	0.77	-0.8
3,213,413	-		Pf6N2E2_2720	0.77	-1.2
3,213,413	-		Pf6N2E2_2720	0.77	+1.1
3,213,413	-		Pf6N2E2_2720	0.77	+0.2
3,213,413	-		Pf6N2E2_2720	0.77	-1.8