Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3949

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
4,063,532	+		Ga0059261_3947	0.14	+0.3
4,063,533	-		Ga0059261_3947	0.14	-0.4
4,063,724	-		Ga0059261_3947	0.54	-1.5
4,063,724	-		Ga0059261_3947	0.54	+1.8
4,063,988	+		Ga0059261_3948	0.11	+0.3
4,063,989	-		Ga0059261_3948	0.11	+1.6
4,063,989	-		Ga0059261_3948	0.11	-0.2
4,064,177	+		Ga0059261_3948	0.54	+1.7
4,064,178	-		Ga0059261_3948	0.54	+0.6
4,064,178	-		Ga0059261_3948	0.54	+3.2
4,064,432	+				+0.6
4,064,432	+				+2.5
4,064,432	+				-2.2
4,064,432	+				+1.3
4,064,432	+				+0.0
4,064,432	+				+1.2
4,064,432	+				+1.6
4,064,432	+				+1.8
4,064,432	+				-1.4
4,064,432	+				+0.9
4,064,432	+				+0.2
4,064,432	+				+1.2
4,064,432	+				-3.1
4,064,432	+				+0.4
4,064,432	+				-2.0
4,064,433	-				+1.4
4,064,433	-				+0.4
4,064,433	-				-2.0
4,064,433	-				+2.2
4,064,433	-				+0.2
4,064,433	-				+2.4
4,064,433	-				-0.7
4,064,433	-				+6.7
4,064,433	-				-0.1
4,064,433	-				+0.8
4,064,437	+				-0.6
4,064,437	+				-0.6
4,064,437	+				+0.3
4,064,437	+				+1.2
4,064,438	-				-0.0
4,064,438	-				+1.2
4,064,438	-				-0.7
4,064,522	-				+0.0
4,064,620	+		Ga0059261_3949	0.20	+2.4
4,064,620	+		Ga0059261_3949	0.20	+2.6
4,064,620	+		Ga0059261_3949	0.20	+2.2
4,064,620	+		Ga0059261_3949	0.20	-0.6
4,064,620	+		Ga0059261_3949	0.20	-1.2
4,064,620	+		Ga0059261_3949	0.20	-1.2
4,064,620	+		Ga0059261_3949	0.20	-0.6
4,064,620	+		Ga0059261_3949	0.20	+2.9
4,064,621	-		Ga0059261_3949	0.21	-0.1
4,064,621	-		Ga0059261_3949	0.21	-0.6
4,064,621	-		Ga0059261_3949	0.21	-0.1
4,064,621	-		Ga0059261_3949	0.21	+0.5
4,064,626	+		Ga0059261_3949	0.22	+1.9
4,064,626	+		Ga0059261_3949	0.22	+0.8
4,064,626	+		Ga0059261_3949	0.22	+1.8
4,064,626	+		Ga0059261_3949	0.22	-0.0
4,064,626	+		Ga0059261_3949	0.22	-0.2
4,064,626	+		Ga0059261_3949	0.22	+0.4
4,064,627	-		Ga0059261_3949	0.22	-1.0
4,064,627	-		Ga0059261_3949	0.22	+2.0
4,064,627	-		Ga0059261_3949	0.22	+1.1
4,064,627	-		Ga0059261_3949	0.22	-1.6
4,064,627	-		Ga0059261_3949	0.22	+0.6
4,064,627	-		Ga0059261_3949	0.22	+0.4
4,064,627	-		Ga0059261_3949	0.22	+0.3
4,064,627	-		Ga0059261_3949	0.22	-1.7
4,064,665	+		Ga0059261_3949	0.30	-0.0
4,064,665	+		Ga0059261_3949	0.30	-1.5
4,064,666	-				+1.2
4,064,749	+		Ga0059261_3949	0.47	-0.1
4,064,770	+		Ga0059261_3949	0.51	-0.4
4,064,770	+		Ga0059261_3949	0.51	+0.2
4,064,770	+		Ga0059261_3949	0.51	-0.1
4,064,771	-		Ga0059261_3949	0.51	+0.4
4,064,771	-		Ga0059261_3949	0.51	+0.2
4,064,771	-		Ga0059261_3949	0.51	-2.0
4,064,915	+		Ga0059261_3949	0.81	-2.2
4,064,916	-		Ga0059261_3949	0.81	+0.2
4,064,937	+				-0.1
4,064,937	+		Ga0059261_3949	0.85	-0.6
4,064,937	+		Ga0059261_3949	0.85	-1.0
4,064,937	+		Ga0059261_3949	0.85	-1.2
4,064,937	+		Ga0059261_3949	0.85	+5.5
4,064,938	-		Ga0059261_3949	0.85	+2.9
4,064,938	-		Ga0059261_3949	0.85	+0.0
4,064,938	-		Ga0059261_3949	0.85	+0.9
4,064,938	-		Ga0059261_3949	0.85	-0.8
4,064,938	-		Ga0059261_3949	0.85	-0.4
4,064,938	-		Ga0059261_3949	0.85	-0.8
4,064,958	-		Ga0059261_3949	0.90	-0.5
4,064,958	-		Ga0059261_3949	0.90	+0.7
4,065,000	+				-1.3
4,065,000	+				+0.0
4,065,000	+				+0.2
4,065,000	+				-1.4
4,065,001	-				+2.8
4,065,001	-				-1.2
4,065,044	+				-0.2
4,065,044	+				+1.5
4,065,044	+				-1.0
4,065,045	-				-0.2
4,065,045	-				-0.4
4,065,145	+				+0.2
4,065,145	+				+0.3
4,065,146	-				+0.0
4,065,196	+		Ga0059261_3950	0.12	-0.8
4,065,196	+		Ga0059261_3950	0.12	-1.1
4,065,196	+		Ga0059261_3950	0.12	+1.2
4,065,196	+		Ga0059261_3950	0.12	-2.5
4,065,197	-		Ga0059261_3950	0.12	+0.6
4,065,197	-		Ga0059261_3950	0.12	-1.9
4,065,197	-		Ga0059261_3950	0.12	+1.6
4,065,197	-		Ga0059261_3950	0.12	+2.8
4,065,333	+		Ga0059261_3950	0.25	+0.7
4,065,334	-		Ga0059261_3950	0.25	+1.6
4,065,334	-		Ga0059261_3950	0.25	+0.5
4,065,334	-		Ga0059261_3950	0.25	-1.1
4,065,569	+		Ga0059261_3950	0.46	+0.8
4,065,569	+		Ga0059261_3950	0.46	-1.6
4,065,569	+		Ga0059261_3950	0.46	+1.5
4,065,569	+		Ga0059261_3950	0.46	-0.4
4,065,569	+		Ga0059261_3950	0.46	+1.2
4,065,570	-		Ga0059261_3950	0.46	-2.2
4,065,570	-		Ga0059261_3950	0.46	+1.9
4,065,570	-		Ga0059261_3950	0.46	+1.2
4,065,570	-		Ga0059261_3950	0.46	+1.3
4,065,570	-		Ga0059261_3950	0.46	-0.3
4,065,687	+		Ga0059261_3950	0.57	-2.0
4,065,687	+		Ga0059261_3950	0.57	-1.8
4,065,687	+		Ga0059261_3950	0.57	-0.8
4,065,687	+		Ga0059261_3950	0.57	-1.1
4,065,687	+		Ga0059261_3950	0.57	+3.7
4,065,687	+		Ga0059261_3950	0.57	-1.1
4,065,687	+		Ga0059261_3950	0.57	+0.8
4,065,687	+		Ga0059261_3950	0.57	-0.5
4,065,687	+		Ga0059261_3950	0.57	+3.2
4,065,687	+		Ga0059261_3950	0.57	+0.5
4,065,687	+		Ga0059261_3950	0.57	-1.4
4,065,687	+		Ga0059261_3950	0.57	+0.6
4,065,687	+		Ga0059261_3950	0.57	+4.4
4,065,687	+				+0.2
4,065,687	+		Ga0059261_3950	0.57	-1.6
4,065,687	+		Ga0059261_3950	0.57	+0.7
4,065,687	+		Ga0059261_3950	0.57	+1.3
4,065,687	+		Ga0059261_3950	0.57	-0.4
4,065,687	+		Ga0059261_3950	0.57	+1.0
4,065,687	+		Ga0059261_3950	0.57	-0.4
4,065,687	+		Ga0059261_3950	0.57	+2.7
4,065,687	+		Ga0059261_3950	0.57	+2.9
4,065,688	-		Ga0059261_3950	0.57	+0.9
4,065,688	-		Ga0059261_3950	0.57	+0.9
4,065,688	-		Ga0059261_3950	0.57	-0.4
4,065,688	-		Ga0059261_3950	0.57	+1.9
4,065,688	-		Ga0059261_3950	0.57	-1.4
4,065,688	-		Ga0059261_3950	0.57	+3.8
4,065,688	-		Ga0059261_3950	0.57	-1.2
4,065,688	-		Ga0059261_3950	0.57	+2.7
4,065,688	-				+2.2
4,065,688	-				+1.2
4,065,688	-		Ga0059261_3950	0.57	+0.9
4,065,688	-		Ga0059261_3950	0.57	-1.2
4,065,688	-		Ga0059261_3950	0.57	+0.9
4,065,688	-		Ga0059261_3950	0.57	+0.9
4,065,688	-		Ga0059261_3950	0.57	+0.6
4,065,688	-		Ga0059261_3950	0.57	+1.9
4,065,688	-		Ga0059261_3950	0.57	-1.1
4,065,688	-		Ga0059261_3950	0.57	-0.2
4,065,688	-		Ga0059261_3950	0.57	-2.5
4,065,688	-		Ga0059261_3950	0.57	+0.9
4,065,688	-		Ga0059261_3950	0.57	+2.3
4,065,863	+		Ga0059261_3950	0.73	+0.2
4,065,863	+		Ga0059261_3950	0.73	-0.1
4,065,864	-		Ga0059261_3950	0.73	+0.4
4,065,864	-		Ga0059261_3950	0.73	+1.9
4,065,881	+		Ga0059261_3950	0.75	-1.2
4,065,881	+		Ga0059261_3950	0.75	+1.6
4,065,881	+		Ga0059261_3950	0.75	-0.3
4,065,881	+		Ga0059261_3950	0.75	+0.8
4,065,881	+		Ga0059261_3950	0.75	+0.0
4,065,882	-		Ga0059261_3950	0.75	+1.4
4,065,882	-		Ga0059261_3950	0.75	+1.2
4,065,882	-		Ga0059261_3950	0.75	-1.6