Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3868

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
3,972,775	+		Ga0059261_3866	0.23	-0.7
3,972,775	+		Ga0059261_3866	0.23	-1.5
3,972,776	-		Ga0059261_3866	0.23	+0.9
3,972,776	-				+1.8
3,972,776	-		Ga0059261_3866	0.23	+0.9
3,972,988	+		Ga0059261_3866	0.44	-1.8
3,972,989	-		Ga0059261_3866	0.44	-1.8
3,972,989	-		Ga0059261_3866	0.44	-1.6
3,972,989	-		Ga0059261_3866	0.44	+0.2
3,973,050	-		Ga0059261_3866	0.50	+2.4
3,973,050	-		Ga0059261_3866	0.50	-0.9
3,973,106	+		Ga0059261_3866	0.56	-2.0
3,973,106	+		Ga0059261_3866	0.56	-1.0
3,973,107	-		Ga0059261_3866	0.56	-0.9
3,973,198	+		Ga0059261_3866	0.65	-2.4
3,973,198	+		Ga0059261_3866	0.65	+0.2
3,973,198	+		Ga0059261_3866	0.65	-0.4
3,973,199	-		Ga0059261_3866	0.65	-1.8
3,973,199	-		Ga0059261_3866	0.65	-1.9
3,973,199	-		Ga0059261_3866	0.65	-0.9
3,973,288	+		Ga0059261_3866	0.74	+0.1
3,973,288	+		Ga0059261_3866	0.74	+0.5
3,973,289	-		Ga0059261_3866	0.74	-2.1
3,973,381	+		Ga0059261_3866	0.83	+1.6
3,973,381	+		Ga0059261_3866	0.83	-2.8
3,973,381	+		Ga0059261_3866	0.83	-0.8
3,973,381	+				+0.6
3,973,381	+		Ga0059261_3866	0.83	-0.9
3,973,381	+		Ga0059261_3866	0.83	-0.1
3,973,381	+		Ga0059261_3866	0.83	+0.2
3,973,381	+		Ga0059261_3866	0.83	-1.1
3,973,381	+		Ga0059261_3866	0.83	+0.3
3,973,382	-		Ga0059261_3866	0.83	-1.4
3,973,382	-		Ga0059261_3866	0.83	+0.7
3,973,382	-		Ga0059261_3866	0.83	-1.0
3,973,382	-		Ga0059261_3866	0.83	-0.6
3,973,382	-		Ga0059261_3866	0.83	-0.6
3,973,382	-		Ga0059261_3866	0.83	+0.2
3,973,382	-		Ga0059261_3866	0.83	-0.8
3,973,382	-		Ga0059261_3866	0.83	+0.0
3,973,382	-		Ga0059261_3866	0.83	-0.2
3,973,382	-		Ga0059261_3866	0.83	-1.8
3,973,382	-		Ga0059261_3866	0.83	+1.3
3,973,382	-		Ga0059261_3866	0.83	-0.4
3,973,382	-		Ga0059261_3866	0.83	-1.1
3,973,382	-		Ga0059261_3866	0.83	+0.1
3,973,382	-		Ga0059261_3866	0.83	-1.1
3,973,388	-		Ga0059261_3866	0.84	-3.4
3,973,388	-		Ga0059261_3866	0.84	+0.9
3,973,388	-		Ga0059261_3866	0.84	-1.6
3,973,388	-		Ga0059261_3866	0.84	-0.4
3,973,388	-		Ga0059261_3866	0.84	-1.4
3,973,389	+		Ga0059261_3866	0.84	-2.1
3,973,389	+		Ga0059261_3866	0.84	-1.3
3,973,390	-		Ga0059261_3866	0.84	-1.1
3,973,469	+				+0.6
3,973,470	-				-0.4
3,973,470	-				-1.1
3,973,470	-				-0.1
3,973,492	+				-2.3
3,973,492	+				-0.7
3,973,492	+				-1.0
3,973,493	-				-0.6
3,973,493	-				-0.7
3,973,493	-				-1.3
3,973,507	+				-0.8
3,973,507	+				-0.9
3,973,543	+				+0.3
3,973,748	+				-0.4
3,973,748	+				+2.0
3,973,749	-				+0.2
3,973,758	+				-0.3
3,973,758	+				+2.2
3,973,759	-				-1.0
3,973,759	-				-1.6
3,973,759	-				+4.9
3,973,759	-				-1.8
3,973,767	+				-1.7
3,973,767	+				-0.8
3,973,991	+		Ga0059261_3868	0.11	-0.6
3,974,030	+		Ga0059261_3868	0.13	-0.7
3,974,046	+				+0.6
3,974,088	+		Ga0059261_3868	0.15	+1.9
3,974,089	-		Ga0059261_3868	0.16	+0.1
3,974,109	+		Ga0059261_3868	0.16	-0.5
3,974,109	+		Ga0059261_3868	0.16	-1.6
3,974,109	+		Ga0059261_3868	0.16	-0.8
3,974,109	+		Ga0059261_3868	0.16	-0.8
3,974,109	+		Ga0059261_3868	0.16	-0.0
3,974,109	+		Ga0059261_3868	0.16	-2.4
3,974,109	+		Ga0059261_3868	0.16	-0.6
3,974,110	-		Ga0059261_3868	0.16	-1.3
3,974,193	+		Ga0059261_3868	0.20	-0.4
3,974,193	+		Ga0059261_3868	0.20	-1.5
3,974,193	+		Ga0059261_3868	0.20	-1.3
3,974,193	+		Ga0059261_3868	0.20	-3.3
3,974,194	-		Ga0059261_3868	0.20	-1.6
3,974,194	-		Ga0059261_3868	0.20	-0.0
3,974,194	-		Ga0059261_3868	0.20	+1.9
3,974,232	+		Ga0059261_3868	0.22	-2.0
3,974,232	+		Ga0059261_3868	0.22	+0.7
3,974,232	+		Ga0059261_3868	0.22	+0.2
3,974,399	+		Ga0059261_3868	0.29	-0.5
3,974,793	+				+1.2
3,974,793	+		Ga0059261_3868	0.47	+1.6
3,974,793	+		Ga0059261_3868	0.47	+1.2
3,974,793	+		Ga0059261_3868	0.47	+0.1
3,974,794	-		Ga0059261_3868	0.47	-1.9
3,974,794	-		Ga0059261_3868	0.47	+0.1
3,974,823	+		Ga0059261_3868	0.48	+2.3
3,974,834	+		Ga0059261_3868	0.48	-1.7
3,974,834	+		Ga0059261_3868	0.48	+1.5
3,974,834	+		Ga0059261_3868	0.48	+1.5
3,974,834	+		Ga0059261_3868	0.48	+0.5
3,974,834	+		Ga0059261_3868	0.48	-1.1
3,974,834	+		Ga0059261_3868	0.48	+1.3
3,974,834	+		Ga0059261_3868	0.48	-0.8
3,974,835	-		Ga0059261_3868	0.48	-1.4
3,974,835	-		Ga0059261_3868	0.48	+0.3
3,974,835	-		Ga0059261_3868	0.48	-1.1
3,974,835	-		Ga0059261_3868	0.48	-1.8
3,974,835	-		Ga0059261_3868	0.48	+0.7
3,974,835	-		Ga0059261_3868	0.48	-0.4
3,974,837	+		Ga0059261_3868	0.49	-2.2
3,974,838	-		Ga0059261_3868	0.49	+0.4
3,974,966	+		Ga0059261_3868	0.54	-0.6
3,975,000	+		Ga0059261_3868	0.56	-0.1
3,975,000	+		Ga0059261_3868	0.56	-1.2
3,975,000	+		Ga0059261_3868	0.56	-2.5
3,975,000	+		Ga0059261_3868	0.56	-0.4
3,975,001	-		Ga0059261_3868	0.56	-0.0
3,975,048	+		Ga0059261_3868	0.58	+2.0
3,975,048	+		Ga0059261_3868	0.58	+0.6
3,975,048	+		Ga0059261_3868	0.58	+0.9
3,975,049	-		Ga0059261_3868	0.58	-0.1
3,975,159	+		Ga0059261_3868	0.63	-2.9
3,975,159	+		Ga0059261_3868	0.63	-0.5
3,975,159	+		Ga0059261_3868	0.63	-1.0
3,975,159	+		Ga0059261_3868	0.63	-1.2
3,975,160	-				+0.6
3,975,160	-		Ga0059261_3868	0.63	+0.8
3,975,160	-		Ga0059261_3868	0.63	-0.4
3,975,197	+		Ga0059261_3868	0.64	-0.6
3,975,198	-		Ga0059261_3868	0.64	-2.0
3,975,433	+		Ga0059261_3868	0.75	-1.7
3,975,434	-		Ga0059261_3868	0.75	+1.6
3,975,434	-		Ga0059261_3868	0.75	-0.1
3,975,434	-		Ga0059261_3868	0.75	+1.0
3,975,434	-		Ga0059261_3868	0.75	-0.3
3,975,447	+		Ga0059261_3868	0.75	+0.1
3,975,447	+		Ga0059261_3868	0.75	+0.2
3,975,447	+		Ga0059261_3868	0.75	-1.7
3,975,447	+		Ga0059261_3868	0.75	-1.8
3,975,447	+		Ga0059261_3868	0.75	+0.7
3,975,447	+		Ga0059261_3868	0.75	-0.1
3,975,448	-		Ga0059261_3868	0.75	-0.6
3,975,448	-		Ga0059261_3868	0.75	+0.5
3,975,448	-		Ga0059261_3868	0.75	-0.9
3,975,448	-		Ga0059261_3868	0.75	+1.8
3,975,448	-		Ga0059261_3868	0.75	+5.0
3,975,459	+		Ga0059261_3868	0.76	-1.6
3,975,459	+		Ga0059261_3868	0.76	+1.1
3,975,459	+		Ga0059261_3868	0.76	-0.6
3,975,459	+		Ga0059261_3868	0.76	-0.1
3,975,459	+		Ga0059261_3868	0.76	+1.7
3,975,460	-		Ga0059261_3868	0.76	-0.8
3,975,504	+		Ga0059261_3868	0.78	+0.6
3,975,505	-		Ga0059261_3868	0.78	-1.5
3,975,505	-		Ga0059261_3868	0.78	-3.0
3,975,524	+		Ga0059261_3868	0.79	-1.5
3,975,705	+		Ga0059261_3868	0.87	+2.3
3,975,705	+		Ga0059261_3868	0.87	-1.0
3,975,705	+		Ga0059261_3868	0.87	-2.4
3,975,705	+		Ga0059261_3868	0.87	-1.5
3,975,705	+		Ga0059261_3868	0.87	-0.3
3,975,706	-		Ga0059261_3868	0.87	-0.6
3,975,706	-		Ga0059261_3868	0.87	+0.5
3,975,706	-		Ga0059261_3868	0.87	-0.0
3,975,706	-		Ga0059261_3868	0.87	+0.3
3,975,706	-		Ga0059261_3868	0.87	-1.0
3,975,706	-				+0.2
3,975,706	-		Ga0059261_3868	0.87	-0.4
3,975,706	-		Ga0059261_3868	0.87	+0.1
3,975,706	-		Ga0059261_3868	0.87	+1.2
3,975,711	+		Ga0059261_3868	0.87	+1.6
3,975,711	+				-0.1
3,975,711	+		Ga0059261_3868	0.87	+1.2
3,975,711	+		Ga0059261_3868	0.87	+3.9
3,975,711	+				+1.2
3,975,712	-		Ga0059261_3868	0.87	-0.0
3,975,712	-		Ga0059261_3868	0.87	-0.8
3,975,735	+		Ga0059261_3868	0.88	-1.2
3,975,736	-		Ga0059261_3868	0.88	+0.9
3,975,736	-		Ga0059261_3868	0.88	+5.3
3,975,736	-		Ga0059261_3868	0.88	-0.7
3,975,736	-		Ga0059261_3868	0.88	+1.3
3,975,736	-		Ga0059261_3868	0.88	-0.6
3,975,736	-		Ga0059261_3868	0.88	+0.2
3,975,736	-		Ga0059261_3868	0.88	+0.2
3,975,903	+				-1.3
3,975,903	+				+0.6
3,975,904	-				-0.1
3,975,904	-				+1.3
3,975,907	-				+2.6
3,975,939	+				+0.9
3,975,940	-				-0.1
3,975,940	-				-0.0
3,975,940	-				+0.2
3,975,942	+				-0.3
3,975,942	+				-0.6
3,975,943	-				+1.5
3,976,028	+				+0.9
3,976,028	+				+0.3
3,976,028	+				-2.4
3,976,028	+				-0.7
3,976,028	+				+1.8
3,976,128	+				-1.0
3,976,129	-				+1.6
3,976,129	-				-0.5
3,976,473	+		Ga0059261_3869	0.45	-0.7
3,976,473	+		Ga0059261_3869	0.45	+1.5
3,976,473	+		Ga0059261_3869	0.45	-0.3
3,976,474	-		Ga0059261_3869	0.45	+1.2
3,976,474	-		Ga0059261_3869	0.45	+0.1
3,976,487	+		Ga0059261_3869	0.46	-1.0
3,976,487	+		Ga0059261_3869	0.46	+2.2
3,976,487	+		Ga0059261_3869	0.46	+1.0
3,976,488	-		Ga0059261_3869	0.46	+0.3
3,976,604	+		Ga0059261_3869	0.58	+0.9
3,976,604	+		Ga0059261_3869	0.58	+0.9
3,976,604	+		Ga0059261_3869	0.58	-1.3
3,976,604	+		Ga0059261_3869	0.58	-1.3
3,976,604	+		Ga0059261_3869	0.58	-1.0
3,976,605	-		Ga0059261_3869	0.58	+0.0
3,976,605	-		Ga0059261_3869	0.58	+0.3
3,976,605	-		Ga0059261_3869	0.58	+0.1
3,976,605	-		Ga0059261_3869	0.58	-2.7
3,976,605	-		Ga0059261_3869	0.58	+1.5
3,976,622	+		Ga0059261_3869	0.60	+0.6
3,976,622	+		Ga0059261_3869	0.60	-0.8
3,976,622	+		Ga0059261_3869	0.60	+2.7
3,976,622	+		Ga0059261_3869	0.60	-0.5
3,976,622	+		Ga0059261_3869	0.60	-1.3
3,976,623	-		Ga0059261_3869	0.60	-0.8
3,976,623	-		Ga0059261_3869	0.60	-1.5
3,976,841	+		Ga0059261_3869	0.82	-1.3
3,976,841	+		Ga0059261_3869	0.82	-0.1
3,976,841	+		Ga0059261_3869	0.82	-2.9
3,976,841	+		Ga0059261_3869	0.82	+1.3
3,976,841	+		Ga0059261_3869	0.82	-1.4
3,976,842	-		Ga0059261_3869	0.82	-1.6
3,976,922	+				-0.7
3,976,922	+				-0.7
3,976,922	+				-1.1
3,976,922	+				+1.0
3,976,922	+				-1.1
3,976,923	-				-1.6
3,976,923	-				-3.6
3,976,923	-				-0.3