Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3698

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
3,810,461	-				-2.1
3,810,461	-				+1.3
3,810,461	-				+2.1
3,810,468	+				+1.8
3,810,468	+				-0.1
3,810,469	-				+0.4
3,810,475	+				-1.2
3,810,475	+				-1.4
3,810,513	-				+2.9
3,810,525	+				+0.5
3,810,537	-				-0.5
3,810,537	-				+0.3
3,810,540	+				-0.8
3,810,583	+				-1.2
3,810,584	-				+0.6
3,810,606	+				-1.8
3,810,606	+				+0.7
3,810,606	+				-1.4
3,810,606	+				-0.8
3,810,606	+				-1.4
3,810,606	+				-0.6
3,810,606	+				+1.8
3,810,607	-				-0.5
3,810,607	-				-0.5
3,810,608	+				+0.1
3,810,608	+				+0.4
3,810,608	+				+0.2
3,810,608	+				-2.1
3,810,609	-				+2.2
3,810,609	-				-2.7
3,810,609	-				-2.4
3,810,609	-				+1.0
3,810,609	-				-1.1
3,810,609	-				-0.4
3,810,609	-				-1.1
3,810,609	-				+0.4
3,810,634	+				-0.1
3,810,635	-				+0.9
3,810,635	-				-1.2
3,810,682	-		Ga0059261_3696	0.10	-1.6
3,810,769	+		Ga0059261_3696	0.33	-1.1
3,810,771	+		Ga0059261_3696	0.34	+0.3
3,810,771	+		Ga0059261_3696	0.34	+1.0
3,810,771	+		Ga0059261_3696	0.34	+1.0
3,810,771	+		Ga0059261_3696	0.34	+2.4
3,810,772	-		Ga0059261_3696	0.34	+1.0
3,810,772	-		Ga0059261_3696	0.34	+3.9
3,810,843	+		Ga0059261_3696	0.53	+0.1
3,810,843	+		Ga0059261_3696	0.53	+2.0
3,810,843	+		Ga0059261_3696	0.53	-1.3
3,810,844	-		Ga0059261_3696	0.53	-0.3
3,810,844	-		Ga0059261_3696	0.53	-1.5
3,810,844	-		Ga0059261_3696	0.53	-1.5
3,810,844	-		Ga0059261_3696	0.53	+1.2
3,811,118	+		Ga0059261_3697	0.35	+3.0
3,811,118	+		Ga0059261_3697	0.35	+0.7
3,811,118	+		Ga0059261_3697	0.35	-1.2
3,811,118	+		Ga0059261_3697	0.35	+0.1
3,811,118	+		Ga0059261_3697	0.35	-0.8
3,811,118	+		Ga0059261_3697	0.35	-0.9
3,811,118	+		Ga0059261_3697	0.35	+1.3
3,811,118	+		Ga0059261_3697	0.35	+1.8
3,811,118	+		Ga0059261_3697	0.35	-0.3
3,811,118	+		Ga0059261_3697	0.35	+1.8
3,811,118	+		Ga0059261_3697	0.35	+3.0
3,811,119	-		Ga0059261_3697	0.35	-0.4
3,811,119	-		Ga0059261_3697	0.35	-0.5
3,811,119	-		Ga0059261_3697	0.35	+0.4
3,811,119	-		Ga0059261_3697	0.35	-1.2
3,811,119	-		Ga0059261_3697	0.35	-1.1
3,811,119	-		Ga0059261_3697	0.35	-0.1
3,811,119	-		Ga0059261_3697	0.35	-0.1
3,811,119	-		Ga0059261_3697	0.35	-0.2
3,811,119	-		Ga0059261_3697	0.35	+3.6
3,811,119	-		Ga0059261_3697	0.35	-1.3
3,811,119	-		Ga0059261_3697	0.35	-0.4
3,811,119	-		Ga0059261_3697	0.35	+4.3
3,811,119	-		Ga0059261_3697	0.35	+3.3
3,811,119	-		Ga0059261_3697	0.35	-0.7
3,811,119	-		Ga0059261_3697	0.35	-1.2
3,811,119	-		Ga0059261_3697	0.35	+0.1
3,811,311	+				-1.8
3,811,353	+				-1.4
3,811,353	+				-2.8
3,811,354	-				+0.5
3,811,354	-				+0.6
3,811,354	-				-0.3
3,811,496	+				+0.2
3,811,496	+				-1.1
3,811,496	+				+3.0
3,811,496	+				-1.9
3,811,496	+				+0.7
3,811,497	-				-1.5
3,811,497	-				-2.0
3,811,522	-		Ga0059261_3698	0.11	+2.3
3,811,522	-		Ga0059261_3698	0.11	+1.0
3,811,523	+				+0.3
3,811,523	+		Ga0059261_3698	0.11	-0.9
3,811,523	+		Ga0059261_3698	0.11	+1.3
3,811,523	+		Ga0059261_3698	0.11	-1.9
3,811,523	+		Ga0059261_3698	0.11	-1.7
3,811,523	+		Ga0059261_3698	0.11	-1.0
3,811,523	+		Ga0059261_3698	0.11	-0.1
3,811,523	+		Ga0059261_3698	0.11	-0.2
3,811,523	+		Ga0059261_3698	0.11	-1.9
3,811,523	+		Ga0059261_3698	0.11	-1.7
3,811,523	+		Ga0059261_3698	0.11	-2.0
3,811,523	+		Ga0059261_3698	0.11	+0.0
3,811,523	+		Ga0059261_3698	0.11	-0.9
3,811,524	-		Ga0059261_3698	0.11	-1.5
3,811,524	-		Ga0059261_3698	0.11	+1.6
3,811,524	-		Ga0059261_3698	0.11	-1.2
3,811,524	-		Ga0059261_3698	0.11	-0.8
3,811,524	-		Ga0059261_3698	0.11	-0.1
3,811,524	-		Ga0059261_3698	0.11	+0.0
3,811,524	-		Ga0059261_3698	0.11	+3.8
3,811,524	-		Ga0059261_3698	0.11	-0.3
3,811,524	-		Ga0059261_3698	0.11	-0.5
3,811,524	-				+2.8
3,811,616	+		Ga0059261_3698	0.24	-2.1
3,811,616	+		Ga0059261_3698	0.24	-1.1
3,811,616	+		Ga0059261_3698	0.24	+5.0
3,811,616	+		Ga0059261_3698	0.24	-1.2
3,811,616	+		Ga0059261_3698	0.24	-1.1
3,811,617	-		Ga0059261_3698	0.24	+2.2
3,811,617	-		Ga0059261_3698	0.24	-2.4
3,811,617	-		Ga0059261_3698	0.24	+4.2
3,811,617	-		Ga0059261_3698	0.24	-1.0
3,811,688	+		Ga0059261_3698	0.34	-1.0
3,811,688	+		Ga0059261_3698	0.34	-1.2
3,811,688	+		Ga0059261_3698	0.34	-1.4
3,811,688	+		Ga0059261_3698	0.34	+0.8
3,811,688	+		Ga0059261_3698	0.34	-2.6
3,811,689	-		Ga0059261_3698	0.35	+1.4
3,811,689	-		Ga0059261_3698	0.35	-0.7
3,811,859	+		Ga0059261_3698	0.59	-1.3
3,811,859	+		Ga0059261_3698	0.59	+2.8
3,811,859	+		Ga0059261_3698	0.59	+0.6
3,811,859	+		Ga0059261_3698	0.59	-1.3
3,811,860	-		Ga0059261_3698	0.59	-2.2
3,811,860	-		Ga0059261_3698	0.59	-0.5
3,811,860	-		Ga0059261_3698	0.59	-1.2
3,811,860	-		Ga0059261_3698	0.59	+1.1
3,811,973	+		Ga0059261_3698	0.75	-2.1
3,811,973	+		Ga0059261_3698	0.75	-1.1
3,811,974	-		Ga0059261_3698	0.75	-0.3
3,811,983	+		Ga0059261_3698	0.76	-0.5
3,811,984	-		Ga0059261_3698	0.76	+2.7
3,811,984	-		Ga0059261_3698	0.76	-1.1
3,812,018	+		Ga0059261_3698	0.81	-0.4
3,812,019	-		Ga0059261_3698	0.81	+0.5
3,812,019	-		Ga0059261_3698	0.81	-2.7
3,812,019	-		Ga0059261_3698	0.81	-0.7
3,812,019	-		Ga0059261_3698	0.81	+1.7
3,812,024	+		Ga0059261_3698	0.82	-0.3
3,812,024	+		Ga0059261_3698	0.82	-1.9
3,812,024	+		Ga0059261_3698	0.82	+3.0
3,812,025	-		Ga0059261_3698	0.82	-1.8
3,812,025	-		Ga0059261_3698	0.82	+2.8
3,812,025	-		Ga0059261_3698	0.82	+3.0
3,812,069	+		Ga0059261_3698	0.88	-1.3
3,812,069	+		Ga0059261_3698	0.88	-0.9
3,812,069	+		Ga0059261_3698	0.88	+0.7
3,812,069	+		Ga0059261_3698	0.88	-0.1
3,812,069	+		Ga0059261_3698	0.88	-1.7
3,812,069	+		Ga0059261_3698	0.88	-2.7
3,812,070	-		Ga0059261_3698	0.88	-1.8
3,812,070	-		Ga0059261_3698	0.88	+0.8
3,812,070	-		Ga0059261_3698	0.88	+0.3
3,812,070	-		Ga0059261_3698	0.88	-1.7
3,812,070	-				+0.7
3,812,070	-				-0.1
3,812,214	-				-1.9
3,812,218	+				+0.3
3,812,219	-				+0.3
3,812,349	+				-0.9
3,812,350	-				+0.3
3,812,371	-				-1.1
3,812,432	+				-1.1
3,812,432	+				+1.4
3,812,432	+				-1.3
3,812,433	-				-1.2
3,812,433	-				-2.1
3,812,493	+				-1.2
3,812,493	+				-1.0
3,812,493	+				+0.7
3,812,493	+				-1.0
3,812,493	+				-0.5
3,812,493	+				+0.7
3,812,494	-				-2.2
3,812,494	-				-1.6
3,812,647	+				+0.3
3,812,805	+		Ga0059261_3699	0.10	+1.4
3,812,806	-		Ga0059261_3699	0.10	+1.7
3,812,806	-		Ga0059261_3699	0.10	-1.6
3,812,877	-		Ga0059261_3699	0.13	+1.2
3,812,971	+		Ga0059261_3699	0.16	-1.1
3,812,971	+		Ga0059261_3699	0.16	+1.5
3,812,971	+		Ga0059261_3699	0.16	-0.3
3,812,971	+		Ga0059261_3699	0.16	-0.9
3,812,971	+		Ga0059261_3699	0.16	-0.7
3,812,971	+		Ga0059261_3699	0.16	-0.1
3,812,971	+		Ga0059261_3699	0.16	-0.7
3,812,971	+		Ga0059261_3699	0.16	-0.1
3,812,971	+		Ga0059261_3699	0.16	-1.8
3,812,971	+		Ga0059261_3699	0.16	+4.2
3,812,971	+		Ga0059261_3699	0.16	+0.6
3,812,972	-		Ga0059261_3699	0.16	+0.3
3,812,972	-		Ga0059261_3699	0.16	-2.1
3,812,972	-		Ga0059261_3699	0.16	-0.7
3,812,972	-		Ga0059261_3699	0.16	-0.2
3,812,972	-		Ga0059261_3699	0.16	-0.9
3,812,972	-		Ga0059261_3699	0.16	+2.4
3,813,022	+		Ga0059261_3699	0.18	-1.6
3,813,022	+		Ga0059261_3699	0.18	-1.5
3,813,022	+		Ga0059261_3699	0.18	-1.5
3,813,023	-		Ga0059261_3699	0.18	-0.1
3,813,023	-		Ga0059261_3699	0.18	+1.7
3,813,023	-		Ga0059261_3699	0.18	-1.1
3,813,023	-		Ga0059261_3699	0.18	-1.4
3,813,023	-		Ga0059261_3699	0.18	+1.5
3,813,023	-		Ga0059261_3699	0.18	-0.9
3,813,023	-		Ga0059261_3699	0.18	-0.7
3,813,082	+		Ga0059261_3699	0.20	+0.3
3,813,082	+		Ga0059261_3699	0.20	-0.7
3,813,082	+		Ga0059261_3699	0.20	-0.2
3,813,082	+		Ga0059261_3699	0.20	+1.3
3,813,082	+		Ga0059261_3699	0.20	-0.5
3,813,083	-		Ga0059261_3699	0.20	-1.2
3,813,083	-		Ga0059261_3699	0.20	+1.7
3,813,083	-		Ga0059261_3699	0.20	-1.9