Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3291

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
3,419,391	-				+3.5
3,419,391	-				-1.6
3,419,391	-				+2.8
3,419,395	+				+1.3
3,419,395	+				+1.2
3,419,395	+				+0.3
3,419,396	-				-1.0
3,419,396	-				+0.1
3,419,396	-				+2.5
3,419,507	-		Ga0059261_3289	0.46	-0.3
3,419,550	+		Ga0059261_3289	0.62	-1.0
3,419,550	+		Ga0059261_3289	0.62	-2.5
3,419,703	+				-0.3
3,419,703	+				-1.1
3,419,703	+				-0.8
3,419,703	+				+0.7
3,419,703	+				+1.3
3,419,703	+				-0.5
3,419,703	+				-1.8
3,419,998	+				+0.5
3,419,998	+				-1.4
3,419,998	+				-0.2
3,419,998	+				+2.5
3,419,999	-				+4.7
3,419,999	-				+1.1
3,420,051	+				+0.0
3,420,051	+				-0.7
3,420,051	+				+1.6
3,420,051	+				+1.2
3,420,051	+				-1.0
3,420,052	-				+0.3
3,420,052	-				-1.0
3,420,066	-				-2.4
3,420,203	+				+0.7
3,420,203	+				-1.3
3,420,203	+				+0.2
3,420,243	+				+0.6
3,420,243	+				+1.4
3,420,244	-				+1.3
3,420,244	-				+0.4
3,420,244	-				-0.8
3,420,244	-				-0.8
3,420,244	-				+0.4
3,420,322	+		Ga0059261_3291	0.25	+1.5
3,420,322	+		Ga0059261_3291	0.25	-0.9
3,420,323	-		Ga0059261_3291	0.25	+2.1
3,420,323	-		Ga0059261_3291	0.25	+2.6
3,420,323	-		Ga0059261_3291	0.25	+2.2
3,420,323	-		Ga0059261_3291	0.25	-2.4
3,420,323	-				+0.7
3,420,361	+		Ga0059261_3291	0.35	-0.4
3,420,361	+		Ga0059261_3291	0.35	-1.0
3,420,361	+		Ga0059261_3291	0.35	+1.2
3,420,362	-		Ga0059261_3291	0.35	-0.1
3,420,362	-		Ga0059261_3291	0.35	-0.4
3,420,362	-		Ga0059261_3291	0.35	+0.2
3,420,362	-		Ga0059261_3291	0.35	-0.0
3,420,406	+		Ga0059261_3291	0.46	-0.5
3,420,406	+		Ga0059261_3291	0.46	-0.4
3,420,406	+		Ga0059261_3291	0.46	+0.1
3,420,406	+		Ga0059261_3291	0.46	-0.8
3,420,406	+		Ga0059261_3291	0.46	-1.6
3,420,406	+		Ga0059261_3291	0.46	-1.4
3,420,407	-		Ga0059261_3291	0.46	-0.7
3,420,407	-		Ga0059261_3291	0.46	+2.3
3,420,407	-		Ga0059261_3291	0.46	-2.9
3,420,407	-		Ga0059261_3291	0.46	-0.4
3,420,409	+		Ga0059261_3291	0.47	+0.1
3,420,409	+		Ga0059261_3291	0.47	-0.5
3,420,409	+		Ga0059261_3291	0.47	-0.3
3,420,409	+		Ga0059261_3291	0.47	+1.0
3,420,410	-		Ga0059261_3291	0.47	-2.2
3,420,410	-		Ga0059261_3291	0.47	+0.6
3,420,457	+		Ga0059261_3291	0.59	-1.0
3,420,457	+		Ga0059261_3291	0.59	-0.2
3,420,458	-		Ga0059261_3291	0.59	-0.9
3,420,458	-		Ga0059261_3291	0.59	+0.8
3,420,458	-		Ga0059261_3291	0.59	-0.7
3,420,458	-		Ga0059261_3291	0.59	+0.9
3,420,458	-		Ga0059261_3291	0.59	+1.3
3,420,535	+		Ga0059261_3291	0.78	-1.2
3,420,535	+		Ga0059261_3291	0.78	+1.4
3,420,535	+		Ga0059261_3291	0.78	+2.1
3,420,535	+		Ga0059261_3291	0.78	+0.3
3,420,535	+		Ga0059261_3291	0.78	-1.4
3,420,535	+		Ga0059261_3291	0.78	-0.4
3,420,536	-		Ga0059261_3291	0.78	-0.4
3,420,536	-		Ga0059261_3291	0.78	+0.2
3,420,536	-		Ga0059261_3291	0.78	-0.3
3,420,536	-		Ga0059261_3291	0.78	-0.5
3,420,536	-		Ga0059261_3291	0.78	-2.8
3,420,536	-		Ga0059261_3291	0.78	-0.7
3,420,536	-		Ga0059261_3291	0.78	+2.0
3,420,536	-		Ga0059261_3291	0.78	+2.3
3,420,536	-		Ga0059261_3291	0.78	+1.4
3,420,536	-		Ga0059261_3291	0.78	-1.9
3,420,536	-		Ga0059261_3291	0.78	+2.1
3,420,556	+		Ga0059261_3291	0.83	+0.3
3,420,556	+		Ga0059261_3291	0.83	+0.9
3,420,556	+		Ga0059261_3291	0.83	+0.0
3,420,556	+		Ga0059261_3291	0.83	+0.5
3,420,556	+		Ga0059261_3291	0.83	+3.6
3,420,556	+		Ga0059261_3291	0.83	-0.0
3,420,556	+		Ga0059261_3291	0.83	-1.9
3,420,556	+		Ga0059261_3291	0.83	-1.8
3,420,557	-		Ga0059261_3291	0.84	+2.4
3,420,557	-		Ga0059261_3291	0.84	-0.7
3,420,557	-		Ga0059261_3291	0.84	+0.5
3,420,557	-		Ga0059261_3291	0.84	-0.3
3,420,557	-		Ga0059261_3291	0.84	-1.7
3,420,557	-				-0.5
3,420,557	-		Ga0059261_3291	0.84	-3.2
3,420,559	+		Ga0059261_3291	0.84	+2.7
3,420,559	+		Ga0059261_3291	0.84	-2.7
3,420,559	+		Ga0059261_3291	0.84	-2.8
3,420,560	-		Ga0059261_3291	0.84	-1.4
3,420,560	-		Ga0059261_3291	0.84	-2.7
3,420,619	+				+4.3
3,420,696	+				+0.7
3,420,880	+		Ga0059261_3292	0.58	+0.7
3,420,880	+		Ga0059261_3292	0.58	-1.3
3,420,881	-		Ga0059261_3292	0.58	+1.1
3,420,881	-		Ga0059261_3292	0.58	-0.7
3,420,881	-		Ga0059261_3292	0.58	+0.6
3,420,881	-		Ga0059261_3292	0.58	-1.0
3,420,881	-		Ga0059261_3292	0.58	+3.0
3,420,881	-		Ga0059261_3292	0.58	-0.9
3,420,881	-		Ga0059261_3292	0.58	+0.6
3,420,963	+		Ga0059261_3292	0.83	-1.7
3,420,963	+		Ga0059261_3292	0.83	+3.5
3,420,963	+		Ga0059261_3292	0.83	+2.6
3,420,963	+		Ga0059261_3292	0.83	-0.4
3,420,964	-		Ga0059261_3292	0.84	+2.9
3,420,964	-		Ga0059261_3292	0.84	+1.3
3,420,964	-		Ga0059261_3292	0.84	+0.4
3,420,964	-		Ga0059261_3292	0.84	+1.0
3,420,964	-		Ga0059261_3292	0.84	-0.4
3,420,964	-		Ga0059261_3292	0.84	-0.3
3,420,964	-		Ga0059261_3292	0.84	+1.8
3,420,964	-		Ga0059261_3292	0.84	-0.8
3,421,026	+				+2.8
3,421,026	+				-1.0
3,421,026	+				-1.5
3,421,027	-				-0.7
3,421,027	-				-1.9
3,421,027	-				+0.9
3,421,123	+		Ga0059261_3293	0.19	-0.4
3,421,123	+		Ga0059261_3293	0.19	+1.4
3,421,123	+		Ga0059261_3293	0.19	-1.6
3,421,123	+		Ga0059261_3293	0.19	-0.9
3,421,123	+		Ga0059261_3293	0.19	-0.0
3,421,123	+		Ga0059261_3293	0.19	+1.6
3,421,123	+		Ga0059261_3293	0.19	+0.8
3,421,124	-		Ga0059261_3293	0.19	-0.4
3,421,124	-		Ga0059261_3293	0.19	-0.4
3,421,124	-		Ga0059261_3293	0.19	-1.6
3,421,124	-		Ga0059261_3293	0.19	-0.9
3,421,159	+		Ga0059261_3293	0.29	-1.8
3,421,159	+		Ga0059261_3293	0.29	-0.3
3,421,160	-		Ga0059261_3293	0.29	+0.3
3,421,160	-		Ga0059261_3293	0.29	-0.8
3,421,160	-		Ga0059261_3293	0.29	+0.2
3,421,160	-		Ga0059261_3293	0.29	+0.5
3,421,160	-		Ga0059261_3293	0.29	-0.3
3,421,291	+		Ga0059261_3293	0.65	+2.8
3,421,291	+		Ga0059261_3293	0.65	-0.2
3,421,291	+		Ga0059261_3293	0.65	+1.3
3,421,291	+		Ga0059261_3293	0.65	+0.1
3,421,291	+		Ga0059261_3293	0.65	-2.6
3,421,291	+		Ga0059261_3293	0.65	-0.9
3,421,292	-		Ga0059261_3293	0.66	-0.4
3,421,292	-		Ga0059261_3293	0.66	-0.0
3,421,292	-		Ga0059261_3293	0.66	+0.3
3,421,292	-		Ga0059261_3293	0.66	-1.8
3,421,309	+		Ga0059261_3293	0.70	-0.7
3,421,310	-		Ga0059261_3293	0.71	-0.2
3,421,310	-		Ga0059261_3293	0.71	+0.9
3,421,310	-		Ga0059261_3293	0.71	-0.3
3,421,348	-		Ga0059261_3293	0.81	-1.0
3,421,472	+				-1.0
3,421,472	+				-0.7
3,421,473	-				-0.9
3,421,473	-				+1.5
3,421,473	-				+0.2
3,421,474	+				-1.5
3,421,474	+				-0.2
3,421,474	+				+1.7
3,421,475	-				-1.6
3,421,475	-				-1.3
3,421,530	+				-0.2
3,421,530	+				+0.8
3,421,530	+				-0.4
3,421,530	+				+2.5
3,421,531	-				+0.6
3,421,531	-				+1.9
3,421,531	-				+1.0
3,421,531	-				+1.3
3,421,539	+				-0.4
3,421,539	+				-1.9
3,421,539	+				-0.0
3,421,539	+				-0.4
3,421,539	+				-2.7
3,421,540	-				-0.5
3,421,540	-				-0.8
3,421,540	-				-1.1
3,421,540	-				-1.8
3,421,540	-				+0.7