Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2576

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
2,663,035	-		Ga0059261_2575	0.63	-1.0
2,663,035	-		Ga0059261_2575	0.63	-0.3
2,663,035	-		Ga0059261_2575	0.63	+1.2
2,663,075	+		Ga0059261_2575	0.65	-1.2
2,663,075	+		Ga0059261_2575	0.65	+0.4
2,663,076	-		Ga0059261_2575	0.65	-1.0
2,663,076	-		Ga0059261_2575	0.65	-1.3
2,663,076	-		Ga0059261_2575	0.65	+5.3
2,663,086	+		Ga0059261_2575	0.66	-1.1
2,663,087	-		Ga0059261_2575	0.66	-0.4
2,663,152	-		Ga0059261_2575	0.69	-2.8
2,663,152	-		Ga0059261_2575	0.69	+0.1
2,663,329	+		Ga0059261_2575	0.80	+1.5
2,663,329	+		Ga0059261_2575	0.80	+1.9
2,663,329	+		Ga0059261_2575	0.80	-1.2
2,663,329	+		Ga0059261_2575	0.80	-0.7
2,663,329	+		Ga0059261_2575	0.80	-2.3
2,663,329	+		Ga0059261_2575	0.80	+2.4
2,663,329	+		Ga0059261_2575	0.80	+0.1
2,663,329	+		Ga0059261_2575	0.80	-1.9
2,663,330	-		Ga0059261_2575	0.80	-1.2
2,663,330	-		Ga0059261_2575	0.80	-0.0
2,663,330	-		Ga0059261_2575	0.80	+0.7
2,663,330	-		Ga0059261_2575	0.80	+0.6
2,663,330	-				+0.1
2,663,330	-		Ga0059261_2575	0.80	-0.9
2,663,330	-		Ga0059261_2575	0.80	-1.7
2,663,330	-		Ga0059261_2575	0.80	-2.1
2,663,330	-				+0.4
2,663,330	-		Ga0059261_2575	0.80	-0.9
2,663,330	-		Ga0059261_2575	0.80	+0.5
2,663,330	-		Ga0059261_2575	0.80	+0.6
2,663,399	+		Ga0059261_2575	0.84	-1.6
2,663,399	+		Ga0059261_2575	0.84	-1.2
2,663,400	-		Ga0059261_2575	0.84	-0.6
2,663,400	-		Ga0059261_2575	0.84	+1.0
2,663,400	-		Ga0059261_2575	0.84	-1.5
2,663,738	+				-1.1
2,663,822	+				+0.6
2,663,822	+				-0.2
2,663,822	+				+4.5
2,663,822	+				+1.7
2,663,822	+				+2.2
2,663,823	-				-0.6
2,663,823	-				+1.1
2,663,856	+				-0.7
2,663,856	+				+0.7
2,663,856	+				+1.0
2,663,856	+				-0.4
2,663,857	-				-1.4
2,663,884	+				+1.2
2,663,885	-				+0.1
2,663,885	-				+3.1
2,663,943	-				-1.6
2,663,943	-				-0.4
2,664,026	+		Ga0059261_2576	0.13	+0.8
2,664,026	+		Ga0059261_2576	0.13	-1.4
2,664,026	+		Ga0059261_2576	0.13	-2.8
2,664,026	+				+5.7
2,664,026	+		Ga0059261_2576	0.13	-3.1
2,664,026	+		Ga0059261_2576	0.13	+0.1
2,664,027	-		Ga0059261_2576	0.13	-1.3
2,664,027	-		Ga0059261_2576	0.13	-0.9
2,664,027	-		Ga0059261_2576	0.13	-2.2
2,664,027	-		Ga0059261_2576	0.13	+0.9
2,664,031	+		Ga0059261_2576	0.14	-0.2
2,664,031	+		Ga0059261_2576	0.14	-1.0
2,664,031	+		Ga0059261_2576	0.14	-0.8
2,664,032	-		Ga0059261_2576	0.14	-0.6
2,664,032	-		Ga0059261_2576	0.14	+0.3
2,664,032	-		Ga0059261_2576	0.14	-1.5
2,664,032	-				-0.2
2,664,207	+		Ga0059261_2576	0.35	-0.2
2,664,207	+		Ga0059261_2576	0.35	+1.7
2,664,207	+		Ga0059261_2576	0.35	-1.0
2,664,207	+		Ga0059261_2576	0.35	+0.1
2,664,207	+		Ga0059261_2576	0.35	-1.9
2,664,207	+		Ga0059261_2576	0.35	-1.5
2,664,207	+		Ga0059261_2576	0.35	-0.7
2,664,208	-		Ga0059261_2576	0.35	+0.5
2,664,208	-				+0.8
2,664,208	-		Ga0059261_2576	0.35	+0.2
2,664,208	-		Ga0059261_2576	0.35	+2.2
2,664,208	-		Ga0059261_2576	0.35	-0.4
2,664,243	+		Ga0059261_2576	0.39	+1.7
2,664,243	+		Ga0059261_2576	0.39	-0.7
2,664,244	-		Ga0059261_2576	0.40	+0.2
2,664,244	-		Ga0059261_2576	0.40	+3.0
2,664,244	-		Ga0059261_2576	0.40	+0.5
2,664,249	+		Ga0059261_2576	0.40	-0.2
2,664,249	+		Ga0059261_2576	0.40	-0.4
2,664,249	+		Ga0059261_2576	0.40	+3.8
2,664,250	-		Ga0059261_2576	0.40	-0.2
2,664,250	-		Ga0059261_2576	0.40	+1.1
2,664,250	-				+3.4
2,664,280	-		Ga0059261_2576	0.44	-1.3
2,664,280	-				-0.2
2,664,280	-		Ga0059261_2576	0.44	-0.9
2,664,280	-		Ga0059261_2576	0.44	+0.4
2,664,307	-		Ga0059261_2576	0.47	-1.2
2,664,330	+		Ga0059261_2576	0.50	+1.1
2,664,330	+		Ga0059261_2576	0.50	-1.3
2,664,330	+		Ga0059261_2576	0.50	-1.0
2,664,330	+		Ga0059261_2576	0.50	-1.5
2,664,330	+				+2.4
2,664,330	+		Ga0059261_2576	0.50	+1.1
2,664,331	-		Ga0059261_2576	0.50	-3.0
2,664,331	-		Ga0059261_2576	0.50	-1.2
2,664,331	-		Ga0059261_2576	0.50	-0.5
2,664,331	-		Ga0059261_2576	0.50	+0.3
2,664,331	-		Ga0059261_2576	0.50	-0.7
2,664,331	-		Ga0059261_2576	0.50	-0.5
2,664,331	-		Ga0059261_2576	0.50	+1.4
2,664,331	-		Ga0059261_2576	0.50	-0.6
2,664,331	-		Ga0059261_2576	0.50	+0.7
2,664,331	-		Ga0059261_2576	0.50	+2.2
2,664,331	-		Ga0059261_2576	0.50	-0.7
2,664,331	-		Ga0059261_2576	0.50	-1.7
2,664,331	-		Ga0059261_2576	0.50	-0.6
2,664,366	+		Ga0059261_2576	0.54	+1.5
2,664,366	+		Ga0059261_2576	0.54	+0.4
2,664,366	+		Ga0059261_2576	0.54	+0.3
2,664,366	+		Ga0059261_2576	0.54	-0.7
2,664,367	-		Ga0059261_2576	0.54	-2.3
2,664,367	-		Ga0059261_2576	0.54	-0.5
2,664,367	-		Ga0059261_2576	0.54	-1.8
2,664,387	+		Ga0059261_2576	0.57	-1.1
2,664,387	+		Ga0059261_2576	0.57	-2.8
2,664,387	+		Ga0059261_2576	0.57	-0.7
2,664,408	+		Ga0059261_2576	0.59	-0.5
2,664,408	+		Ga0059261_2576	0.59	+0.8
2,664,408	+		Ga0059261_2576	0.59	-2.2
2,664,408	+		Ga0059261_2576	0.59	+0.8
2,664,408	+		Ga0059261_2576	0.59	+0.9
2,664,408	+		Ga0059261_2576	0.59	+0.9
2,664,408	+		Ga0059261_2576	0.59	+2.0
2,664,408	+		Ga0059261_2576	0.59	+2.9
2,664,408	+		Ga0059261_2576	0.59	+0.2
2,664,408	+		Ga0059261_2576	0.59	+1.8
2,664,408	+		Ga0059261_2576	0.59	+0.4
2,664,409	-		Ga0059261_2576	0.60	-1.7
2,664,409	-		Ga0059261_2576	0.60	+0.3
2,664,409	-		Ga0059261_2576	0.60	-0.7
2,664,409	-		Ga0059261_2576	0.60	-0.6
2,664,430	+		Ga0059261_2576	0.62	+0.8
2,664,430	+		Ga0059261_2576	0.62	+2.4
2,664,430	+		Ga0059261_2576	0.62	-0.7
2,664,430	+		Ga0059261_2576	0.62	+0.3
2,664,430	+				+1.4
2,664,430	+				+0.4
2,664,431	-		Ga0059261_2576	0.62	-2.6
2,664,431	-		Ga0059261_2576	0.62	-1.6
2,664,431	-		Ga0059261_2576	0.62	+3.1
2,664,431	-		Ga0059261_2576	0.62	+0.3
2,664,431	-		Ga0059261_2576	0.62	+1.2
2,664,431	-		Ga0059261_2576	0.62	+1.1
2,664,809	+		Ga0059261_2577	0.13	-0.4
2,664,809	+		Ga0059261_2577	0.13	+0.4
2,664,809	+		Ga0059261_2577	0.13	+0.5
2,664,809	+		Ga0059261_2577	0.13	-0.0
2,664,810	-				+2.4
2,664,810	-		Ga0059261_2577	0.13	-0.7
2,664,844	+		Ga0059261_2577	0.19	-2.2
2,664,844	+		Ga0059261_2577	0.19	+1.3
2,664,845	-		Ga0059261_2577	0.20	-0.7
2,665,040	+		Ga0059261_2577	0.56	+0.5
2,665,040	+		Ga0059261_2577	0.56	-1.4
2,665,040	+		Ga0059261_2577	0.56	+0.8
2,665,040	+		Ga0059261_2577	0.56	-1.6
2,665,040	+		Ga0059261_2577	0.56	-0.4
2,665,040	+		Ga0059261_2577	0.56	+1.8
2,665,040	+		Ga0059261_2577	0.56	+0.4
2,665,040	+		Ga0059261_2577	0.56	-2.0
2,665,040	+		Ga0059261_2577	0.56	+0.1
2,665,041	-		Ga0059261_2577	0.56	-0.3
2,665,041	-		Ga0059261_2577	0.56	+0.8
2,665,041	-		Ga0059261_2577	0.56	-0.3
2,665,041	-				+2.4
2,665,041	-		Ga0059261_2577	0.56	-0.2
2,665,041	-		Ga0059261_2577	0.56	-0.3
2,665,127	+		Ga0059261_2577	0.72	-0.8
2,665,127	+		Ga0059261_2577	0.72	+0.5
2,665,127	+		Ga0059261_2577	0.72	-1.3
2,665,128	-		Ga0059261_2577	0.72	-0.9
2,665,128	-		Ga0059261_2577	0.72	+0.1
2,665,153	+		Ga0059261_2577	0.77	+0.4
2,665,153	+		Ga0059261_2577	0.77	+1.8
2,665,154	-				+1.4
2,665,327	+		Ga0059261_2578	0.11	-0.2
2,665,573	+		Ga0059261_2578	0.64	+0.6
2,665,573	+		Ga0059261_2578	0.64	+0.3
2,665,573	+		Ga0059261_2578	0.64	+1.6
2,665,574	-		Ga0059261_2578	0.64	-1.8
2,665,650	+		Ga0059261_2578	0.81	+0.1
2,665,650	+		Ga0059261_2578	0.81	-0.8
2,665,650	+		Ga0059261_2578	0.81	-0.6
2,665,651	-		Ga0059261_2578	0.81	+0.4
2,665,651	-		Ga0059261_2578	0.81	-1.9
2,665,651	-		Ga0059261_2578	0.81	+0.2
2,665,666	+		Ga0059261_2578	0.84	-0.7
2,665,666	+		Ga0059261_2578	0.84	-2.2
2,665,666	+				+0.8
2,665,666	+		Ga0059261_2578	0.84	+0.1
2,665,666	+		Ga0059261_2578	0.84	+0.5
2,665,666	+		Ga0059261_2578	0.84	+0.7
2,665,666	+		Ga0059261_2578	0.84	+0.8
2,665,667	-		Ga0059261_2578	0.84	+0.3
2,665,667	-		Ga0059261_2578	0.84	-2.5
2,665,667	-		Ga0059261_2578	0.84	-1.8