Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2367

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
2,466,740	+		Ga0059261_2365	0.18	+1.2
2,466,740	+		Ga0059261_2365	0.18	-2.5
2,466,741	-		Ga0059261_2365	0.18	-0.5
2,466,741	-		Ga0059261_2365	0.18	+1.0
2,466,813	-		Ga0059261_2365	0.38	+0.9
2,466,860	+		Ga0059261_2365	0.51	+2.6
2,467,047	+				+0.1
2,467,048	-				-1.9
2,467,048	-				-0.9
2,467,048	-				+0.5
2,467,153	+				+4.0
2,467,154	-				+0.4
2,467,154	-				+1.8
2,467,258	-				+0.8
2,467,260	+		Ga0059261_2366	0.23	-0.9
2,467,260	+		Ga0059261_2366	0.23	+1.7
2,467,260	+		Ga0059261_2366	0.23	-0.6
2,467,261	-		Ga0059261_2366	0.23	-0.2
2,467,278	+		Ga0059261_2366	0.26	-2.4
2,467,278	+				-0.2
2,467,278	+		Ga0059261_2366	0.26	+4.5
2,467,278	+		Ga0059261_2366	0.26	+0.4
2,467,278	+		Ga0059261_2366	0.26	+1.1
2,467,278	+		Ga0059261_2366	0.26	+0.3
2,467,279	-		Ga0059261_2366	0.26	+3.5
2,467,279	-		Ga0059261_2366	0.26	+1.4
2,467,279	-		Ga0059261_2366	0.26	+0.8
2,467,279	-		Ga0059261_2366	0.26	+0.7
2,467,279	-		Ga0059261_2366	0.26	-0.2
2,467,279	-		Ga0059261_2366	0.26	-1.1
2,467,279	-		Ga0059261_2366	0.26	+0.9
2,467,279	-		Ga0059261_2366	0.26	-0.6
2,467,279	-		Ga0059261_2366	0.26	-0.3
2,467,279	-		Ga0059261_2366	0.26	+0.7
2,467,347	+		Ga0059261_2366	0.40	-1.2
2,467,347	+		Ga0059261_2366	0.40	-0.4
2,467,347	+		Ga0059261_2366	0.40	+1.7
2,467,347	+		Ga0059261_2366	0.40	-1.5
2,467,347	+		Ga0059261_2366	0.40	-0.2
2,467,347	+		Ga0059261_2366	0.40	-2.7
2,467,347	+		Ga0059261_2366	0.40	-0.6
2,467,347	+		Ga0059261_2366	0.40	-1.0
2,467,347	+		Ga0059261_2366	0.40	+0.8
2,467,348	-		Ga0059261_2366	0.40	+0.1
2,467,348	-		Ga0059261_2366	0.40	+0.2
2,467,348	-		Ga0059261_2366	0.40	+2.5
2,467,348	-		Ga0059261_2366	0.40	-0.7
2,467,348	-		Ga0059261_2366	0.40	+0.3
2,467,348	-		Ga0059261_2366	0.40	+2.4
2,467,348	-		Ga0059261_2366	0.40	+2.8
2,467,348	-		Ga0059261_2366	0.40	+0.2
2,467,348	-		Ga0059261_2366	0.40	-0.1
2,467,348	-		Ga0059261_2366	0.40	-0.4
2,467,348	-		Ga0059261_2366	0.40	+1.8
2,467,389	+		Ga0059261_2366	0.48	-0.8
2,467,617	+				-2.2
2,467,617	+				-0.4
2,467,617	+				-0.7
2,467,617	+				+1.3
2,467,617	+				-1.8
2,467,617	+				-0.2
2,467,617	+				+1.6
2,467,618	-				-2.2
2,467,618	-				-0.5
2,467,618	-				-0.9
2,467,618	-				+1.8
2,467,618	-				+1.6
2,467,633	+				-0.5
2,467,633	+				-0.4
2,467,633	+				+2.2
2,467,633	+				+3.6
2,467,633	+				-2.2
2,467,633	+				-2.1
2,467,633	+				+2.2
2,467,633	+				-3.4
2,467,633	+				+1.3
2,467,633	+				-1.0
2,467,633	+				+1.0
2,467,634	-				-0.6
2,467,717	+				-1.0
2,467,717	+				+0.0
2,467,717	+				-0.2
2,467,718	-				-1.0
2,467,718	-				-1.1
2,467,720	+				-0.6
2,467,720	+				-2.1
2,467,720	+				+2.4
2,467,721	-				+0.9
2,467,721	-				-0.3
2,467,721	-				+2.2
2,467,721	-				-0.4
2,467,721	-				-0.8
2,467,721	-				-0.9
2,467,721	-				-0.6
2,467,721	-				-0.3
2,467,721	-				+2.4
2,467,843	+		Ga0059261_2367	0.14	+1.4
2,467,843	+		Ga0059261_2367	0.14	-0.8
2,467,843	+		Ga0059261_2367	0.14	+5.5
2,467,843	+		Ga0059261_2367	0.14	+0.6
2,467,843	+		Ga0059261_2367	0.14	-2.8
2,467,844	-		Ga0059261_2367	0.14	-0.7
2,467,844	-		Ga0059261_2367	0.14	+1.5
2,467,951	+		Ga0059261_2367	0.23	-0.5
2,467,951	+		Ga0059261_2367	0.23	-0.3
2,467,951	+		Ga0059261_2367	0.23	+1.1
2,467,951	+		Ga0059261_2367	0.23	-0.4
2,467,952	-		Ga0059261_2367	0.23	+0.4
2,468,155	+		Ga0059261_2367	0.41	+1.0
2,468,155	+		Ga0059261_2367	0.41	+0.1
2,468,155	+		Ga0059261_2367	0.41	+3.1
2,468,155	+		Ga0059261_2367	0.41	+0.7
2,468,155	+		Ga0059261_2367	0.41	-1.5
2,468,155	+		Ga0059261_2367	0.41	+0.4
2,468,155	+		Ga0059261_2367	0.41	+1.4
2,468,155	+		Ga0059261_2367	0.41	-1.6
2,468,156	-				+1.2
2,468,156	-		Ga0059261_2367	0.41	-1.5
2,468,156	-		Ga0059261_2367	0.41	+4.2
2,468,156	-		Ga0059261_2367	0.41	+1.4
2,468,158	-		Ga0059261_2367	0.41	-0.3
2,468,189	+		Ga0059261_2367	0.44	+4.3
2,468,189	+		Ga0059261_2367	0.44	-1.6
2,468,189	+		Ga0059261_2367	0.44	-0.6
2,468,189	+		Ga0059261_2367	0.44	-0.6
2,468,190	-		Ga0059261_2367	0.44	-2.1
2,468,190	-		Ga0059261_2367	0.44	+1.3
2,468,332	+		Ga0059261_2367	0.56	-0.3
2,468,333	-		Ga0059261_2367	0.56	-1.6
2,468,333	-		Ga0059261_2367	0.56	-0.2
2,468,333	-		Ga0059261_2367	0.56	+1.4
2,468,374	+		Ga0059261_2367	0.60	-1.1
2,468,374	+		Ga0059261_2367	0.60	-1.6
2,468,374	+		Ga0059261_2367	0.60	-2.3
2,468,375	-		Ga0059261_2367	0.60	+1.4
2,468,467	+		Ga0059261_2367	0.68	+1.7
2,468,467	+		Ga0059261_2367	0.68	-0.3
2,468,467	+		Ga0059261_2367	0.68	-0.5
2,468,467	+		Ga0059261_2367	0.68	+1.7
2,468,468	-		Ga0059261_2367	0.68	-0.3
2,468,813	+				+3.0
2,468,814	-				+3.6
2,468,814	-				+3.2
2,469,089	+		Ga0059261_2368	0.70	-1.2
2,469,089	+		Ga0059261_2368	0.70	+0.8
2,469,089	+		Ga0059261_2368	0.70	-0.2
2,469,153	+		Ga0059261_2368	0.88	-0.4
2,469,153	+		Ga0059261_2368	0.88	+0.5
2,469,242	-				+0.0
2,469,242	-				-0.8
2,469,268	-				+1.4
2,469,280	+				+0.6
2,469,362	+		Ga0059261_2369	0.14	+0.5
2,469,508	+		Ga0059261_2369	0.40	+0.1
2,469,508	+		Ga0059261_2369	0.40	+0.7
2,469,508	+		Ga0059261_2369	0.40	-1.6
2,469,508	+		Ga0059261_2369	0.40	+1.8
2,469,508	+		Ga0059261_2369	0.40	+0.5
2,469,508	+		Ga0059261_2369	0.40	-1.5
2,469,508	+		Ga0059261_2369	0.40	-0.0
2,469,509	-		Ga0059261_2369	0.40	-0.4
2,469,509	-		Ga0059261_2369	0.40	-0.9
2,469,548	+		Ga0059261_2369	0.47	+0.1
2,469,594	+		Ga0059261_2369	0.55	+0.6
2,469,594	+		Ga0059261_2369	0.55	+1.9
2,469,594	+		Ga0059261_2369	0.55	-2.7
2,469,595	-		Ga0059261_2369	0.55	+0.1
2,469,595	-		Ga0059261_2369	0.55	+0.6
2,469,595	-		Ga0059261_2369	0.55	-1.5
2,469,595	-		Ga0059261_2369	0.55	-1.3