Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1738

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
1,841,647	+		Ga0059261_1737	0.67	-1.0
1,841,647	+		Ga0059261_1737	0.67	+0.4
1,841,648	-		Ga0059261_1737	0.67	+0.3
1,841,648	-		Ga0059261_1737	0.67	+0.3
1,841,648	-		Ga0059261_1737	0.67	-1.3
1,841,648	-		Ga0059261_1737	0.67	+3.2
1,841,649	+		Ga0059261_1737	0.67	+0.4
1,841,649	+		Ga0059261_1737	0.67	-1.5
1,841,650	-		Ga0059261_1737	0.67	-0.0
1,841,650	-		Ga0059261_1737	0.67	+2.0
1,841,650	-		Ga0059261_1737	0.67	-0.7
1,841,650	-		Ga0059261_1737	0.67	-0.1
1,841,708	-		Ga0059261_1737	0.82	+2.4
1,841,793	+				+1.2
1,841,793	+				+3.4
1,841,830	+				-1.6
1,841,830	+				+1.2
1,841,830	+				-2.1
1,841,830	+				+0.9
1,841,831	-				+1.4
1,841,831	-				+3.7
1,841,831	-				-1.9
1,841,982	+				+0.9
1,841,982	+				-0.5
1,841,982	+				-1.6
1,841,982	+				+1.1
1,841,983	-				+0.3
1,841,983	-				-1.5
1,841,983	-				-0.2
1,841,983	-				+5.1
1,841,983	-				-1.1
1,841,983	-				+2.4
1,841,983	-				-1.6
1,841,983	-				+0.7
1,842,017	+				+1.4
1,842,017	+				-1.3
1,842,017	+				+1.2
1,842,018	-				+0.7
1,842,018	-				+1.9
1,842,018	-				-0.6
1,842,282	+		Ga0059261_1738	0.17	-0.5
1,842,282	+		Ga0059261_1738	0.17	-0.8
1,842,282	+		Ga0059261_1738	0.17	-2.3
1,842,283	-		Ga0059261_1738	0.17	+0.7
1,842,283	-		Ga0059261_1738	0.17	+2.9
1,842,283	-		Ga0059261_1738	0.17	+0.2
1,842,283	-		Ga0059261_1738	0.17	+1.7
1,842,283	-		Ga0059261_1738	0.17	-2.1
1,842,300	+		Ga0059261_1738	0.18	-0.7
1,842,300	+		Ga0059261_1738	0.18	-3.0
1,842,300	+		Ga0059261_1738	0.18	-0.3
1,842,300	+		Ga0059261_1738	0.18	+0.2
1,842,300	+		Ga0059261_1738	0.18	+2.5
1,842,300	+		Ga0059261_1738	0.18	+0.7
1,842,426	+		Ga0059261_1738	0.23	+0.2
1,842,426	+		Ga0059261_1738	0.23	+0.2
1,842,426	+		Ga0059261_1738	0.23	+0.0
1,842,507	+		Ga0059261_1738	0.25	-1.0
1,842,507	+		Ga0059261_1738	0.25	+2.0
1,842,507	+		Ga0059261_1738	0.25	+0.4
1,842,507	+		Ga0059261_1738	0.25	+0.3
1,842,508	-		Ga0059261_1738	0.25	+0.2
1,842,508	-		Ga0059261_1738	0.25	+0.4
1,842,508	-		Ga0059261_1738	0.25	-1.8
1,842,508	-				+1.9
1,842,508	-		Ga0059261_1738	0.25	-0.8
1,842,508	-		Ga0059261_1738	0.25	-2.2
1,842,510	+		Ga0059261_1738	0.25	+1.1
1,842,510	+		Ga0059261_1738	0.25	+0.6
1,842,510	+		Ga0059261_1738	0.25	-0.2
1,842,510	+		Ga0059261_1738	0.25	-0.2
1,842,510	+		Ga0059261_1738	0.25	-2.1
1,842,510	+		Ga0059261_1738	0.25	+0.3
1,842,510	+		Ga0059261_1738	0.25	-0.8
1,842,511	-		Ga0059261_1738	0.26	+4.7
1,842,511	-		Ga0059261_1738	0.26	-0.6
1,842,511	-		Ga0059261_1738	0.26	-0.3
1,842,511	-		Ga0059261_1738	0.26	-0.1
1,842,511	-		Ga0059261_1738	0.26	-0.0
1,842,511	-		Ga0059261_1738	0.26	+4.6
1,842,511	-		Ga0059261_1738	0.26	-1.0
1,842,511	-		Ga0059261_1738	0.26	+1.2
1,842,511	-		Ga0059261_1738	0.26	-1.3
1,842,549	+		Ga0059261_1738	0.27	+0.6
1,842,549	+		Ga0059261_1738	0.27	-0.7
1,842,549	+		Ga0059261_1738	0.27	+3.3
1,842,549	+		Ga0059261_1738	0.27	-1.8
1,842,549	+		Ga0059261_1738	0.27	-0.6
1,842,550	-		Ga0059261_1738	0.27	-0.1
1,842,550	-		Ga0059261_1738	0.27	-0.5
1,842,550	-		Ga0059261_1738	0.27	+1.6
1,842,550	-		Ga0059261_1738	0.27	-0.4
1,842,550	-		Ga0059261_1738	0.27	+1.2
1,842,619	+		Ga0059261_1738	0.29	+0.1
1,842,619	+		Ga0059261_1738	0.29	-1.7
1,842,619	+		Ga0059261_1738	0.29	+0.5
1,842,619	+		Ga0059261_1738	0.29	-1.0
1,842,619	+		Ga0059261_1738	0.29	+1.7
1,842,620	-		Ga0059261_1738	0.29	+1.5
1,842,620	-		Ga0059261_1738	0.29	+0.9
1,842,620	-		Ga0059261_1738	0.29	-1.7
1,842,620	-		Ga0059261_1738	0.29	-0.0
1,842,637	-		Ga0059261_1738	0.30	+0.7
1,842,637	-		Ga0059261_1738	0.30	-2.0
1,842,649	+		Ga0059261_1738	0.30	+4.7
1,842,657	+		Ga0059261_1738	0.31	+1.7
1,842,657	+		Ga0059261_1738	0.31	-0.3
1,842,657	+		Ga0059261_1738	0.31	-2.4
1,842,657	+		Ga0059261_1738	0.31	+0.4
1,842,657	+		Ga0059261_1738	0.31	+0.1
1,842,657	+		Ga0059261_1738	0.31	+1.4
1,842,657	+		Ga0059261_1738	0.31	-0.4
1,842,657	+		Ga0059261_1738	0.31	-0.6
1,842,657	+		Ga0059261_1738	0.31	-0.9
1,842,658	-		Ga0059261_1738	0.31	-1.3
1,842,658	-		Ga0059261_1738	0.31	+2.6
1,842,658	-		Ga0059261_1738	0.31	+0.9
1,842,658	-		Ga0059261_1738	0.31	+2.7
1,842,658	-		Ga0059261_1738	0.31	-1.0
1,842,658	-		Ga0059261_1738	0.31	+0.2
1,842,658	-		Ga0059261_1738	0.31	+3.4
1,842,658	-		Ga0059261_1738	0.31	+3.4
1,842,658	-		Ga0059261_1738	0.31	+2.3
1,842,658	-		Ga0059261_1738	0.31	+1.3
1,842,851	+		Ga0059261_1738	0.38	+1.0
1,842,851	+		Ga0059261_1738	0.38	-1.2
1,842,851	+		Ga0059261_1738	0.38	+1.0
1,842,851	+		Ga0059261_1738	0.38	-1.0
1,842,851	+		Ga0059261_1738	0.38	-1.7
1,842,851	+		Ga0059261_1738	0.38	+0.9
1,842,852	-		Ga0059261_1738	0.38	+0.1
1,842,852	-		Ga0059261_1738	0.38	+2.2
1,842,852	-		Ga0059261_1738	0.38	+2.0
1,842,852	-		Ga0059261_1738	0.38	-0.5
1,842,889	+		Ga0059261_1738	0.39	+0.5
1,842,916	+		Ga0059261_1738	0.40	+0.1
1,842,916	+		Ga0059261_1738	0.40	-0.6
1,842,916	+		Ga0059261_1738	0.40	-2.1
1,842,916	+		Ga0059261_1738	0.40	+0.8
1,842,916	+		Ga0059261_1738	0.40	-0.6
1,842,917	-		Ga0059261_1738	0.40	+1.0
1,842,917	-		Ga0059261_1738	0.40	-2.2
1,842,917	-		Ga0059261_1738	0.40	-0.6
1,843,038	+		Ga0059261_1738	0.44	+1.2
1,843,039	-		Ga0059261_1738	0.44	+2.0
1,843,063	+		Ga0059261_1738	0.45	-1.6
1,843,063	+		Ga0059261_1738	0.45	-2.0
1,843,063	+		Ga0059261_1738	0.45	+0.5
1,843,064	-		Ga0059261_1738	0.45	+0.1
1,843,437	+		Ga0059261_1738	0.58	-0.1
1,843,568	+		Ga0059261_1738	0.63	+0.6
1,843,568	+		Ga0059261_1738	0.63	+0.4
1,843,568	+		Ga0059261_1738	0.63	-0.4
1,843,568	+		Ga0059261_1738	0.63	+0.8
1,843,568	+		Ga0059261_1738	0.63	+0.9
1,843,568	+		Ga0059261_1738	0.63	-0.5
1,843,568	+		Ga0059261_1738	0.63	-0.9
1,843,568	+		Ga0059261_1738	0.63	+0.9
1,843,569	-		Ga0059261_1738	0.63	+0.4
1,843,569	-		Ga0059261_1738	0.63	+1.6
1,843,569	-		Ga0059261_1738	0.63	-0.5
1,843,569	-		Ga0059261_1738	0.63	+0.6
1,843,569	-		Ga0059261_1738	0.63	-2.5
1,843,569	-		Ga0059261_1738	0.63	-2.4
1,843,569	-		Ga0059261_1738	0.63	-0.4
1,843,569	-		Ga0059261_1738	0.63	+1.4
1,843,569	-		Ga0059261_1738	0.63	+3.9
1,843,569	-				+2.4
1,843,569	-		Ga0059261_1738	0.63	-2.5
1,843,652	+		Ga0059261_1738	0.66	+0.2
1,843,652	+		Ga0059261_1738	0.66	+0.6
1,843,652	+		Ga0059261_1738	0.66	+1.7
1,843,652	+		Ga0059261_1738	0.66	+0.7
1,843,653	-		Ga0059261_1738	0.66	+2.2
1,843,653	-		Ga0059261_1738	0.66	+0.5
1,843,653	-		Ga0059261_1738	0.66	+2.6
1,843,774	+		Ga0059261_1738	0.70	-0.1
1,843,775	-		Ga0059261_1738	0.70	+3.2
1,843,775	-		Ga0059261_1738	0.70	+0.3
1,843,795	+		Ga0059261_1738	0.71	+1.1
1,843,795	+		Ga0059261_1738	0.71	+0.4
1,843,795	+		Ga0059261_1738	0.71	+0.1
1,843,795	+		Ga0059261_1738	0.71	-0.2
1,843,796	-				+0.4
1,843,796	-		Ga0059261_1738	0.71	-1.1
1,843,796	-		Ga0059261_1738	0.71	+0.4
1,843,796	-		Ga0059261_1738	0.71	-0.1
1,843,796	-		Ga0059261_1738	0.71	+2.0
1,843,837	+		Ga0059261_1738	0.73	+0.0
1,843,837	+		Ga0059261_1738	0.73	-0.7
1,843,837	+		Ga0059261_1738	0.73	-0.6
1,843,838	-		Ga0059261_1738	0.73	+0.1
1,844,321	+		Ga0059261_1738	0.90	-1.1
1,844,321	+		Ga0059261_1738	0.90	-0.5
1,844,321	+		Ga0059261_1738	0.90	-0.6
1,844,322	-		Ga0059261_1738	0.90	-0.7
1,844,322	-		Ga0059261_1738	0.90	+1.4
1,844,343	+				-2.0
1,844,438	-				-0.9
1,844,535	+				-1.0
1,844,536	-				-1.7
1,844,598	+				-1.3
1,844,599	-				+1.4
1,844,624	+				-0.2
1,844,653	+				+0.5
1,844,653	+				+1.4
1,844,653	+				-0.9
1,844,654	-				-1.4
1,844,654	-				+1.6
1,844,655	+				+0.6
1,844,656	-				-1.7
1,844,656	-				-1.0
1,844,722	-				-0.7
1,844,798	+				-2.4
1,844,798	+				+0.2
1,844,798	+				+5.2
1,844,799	-				-1.0
1,844,799	-				-0.5
1,844,799	-				+0.5
1,844,841	+		Ga0059261_1739	0.19	+2.8
1,844,841	+		Ga0059261_1739	0.19	-0.5
1,844,842	-		Ga0059261_1739	0.19	+1.4
1,844,842	-		Ga0059261_1739	0.19	-2.6
1,844,842	-		Ga0059261_1739	0.19	-1.1
1,844,842	-		Ga0059261_1739	0.19	-1.6
1,844,842	-		Ga0059261_1739	0.19	+0.4
1,844,842	-		Ga0059261_1739	0.19	-0.3
1,845,318	+				-0.1
1,845,318	+				+3.1
1,845,318	+				-0.1
1,845,318	+				+0.4
1,845,318	+				+1.4
1,845,319	-				+1.2
1,845,319	-				+4.3
1,845,319	-				+0.9
1,845,353	+				+1.4
1,845,353	+				+0.2
1,845,353	+				-0.2
1,845,353	+				+2.4
1,845,353	+				+1.0
1,845,353	+				-1.0
1,845,353	+				+3.0
1,845,353	+				-0.0
1,845,353	+				+1.2
1,845,354	-				+0.4
1,845,354	-				-0.8
1,845,354	-				-0.0
1,845,354	-				+1.1
1,845,354	-				-0.4
1,845,354	-				+0.6
1,845,354	-				+4.9
1,845,354	-				+0.6
1,845,354	-				+0.6
1,845,386	+				+2.9
1,845,386	+				-0.6
1,845,386	+				-1.1
1,845,386	+				-1.8
1,845,386	+				-2.3
1,845,386	+				+0.1
1,845,386	+				+0.1
1,845,387	-				-1.3
1,845,387	-				+1.9
1,845,387	-				+1.7
1,845,387	-				+0.9
1,845,387	-				-0.3
1,845,387	-				+0.0
1,845,387	-				-1.3
1,845,387	-				+0.2
1,845,426	-				-2.0
1,845,426	-				-2.0
1,845,464	+				-0.7
1,845,464	+				-0.7
1,845,464	+				-1.1
1,845,464	+				-1.3
1,845,465	-				-0.7
1,845,465	-				+0.3
1,845,465	-				-0.4
1,845,550	+				-1.4
1,845,550	+				+0.5
1,845,557	+				-1.3
1,845,557	+				-1.5
1,845,557	+				+0.1
1,845,557	+				+2.4
1,845,557	+				-1.1
1,845,558	-				-1.1
1,845,558	-				+2.6
1,845,558	-				+2.0
1,845,558	-				-0.9
1,845,558	-				-0.6
1,845,558	-				-0.7
1,845,558	-				+1.1
1,845,558	-				+1.0
1,845,571	+				+0.1
1,845,571	+				-1.0
1,845,571	+				-0.1
1,845,572	-				+1.3
1,845,572	-				+0.0
1,845,600	+				+3.3
1,845,600	+				-1.3
1,845,600	+				+3.4
1,845,600	+				-2.6
1,845,600	+				-0.1
1,845,601	-				+2.6
1,845,601	-				-0.1
1,845,601	-				+3.2