Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1647

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
1,734,721	+		Ga0059261_1646	0.70	-0.5
1,734,721	+		Ga0059261_1646	0.70	+1.1
1,734,721	+		Ga0059261_1646	0.70	-1.2
1,734,721	+		Ga0059261_1646	0.70	-1.5
1,734,722	-		Ga0059261_1646	0.70	+1.1
1,734,722	-		Ga0059261_1646	0.70	+0.3
1,734,802	+		Ga0059261_1646	0.73	+0.1
1,734,802	+		Ga0059261_1646	0.73	+0.5
1,734,802	+		Ga0059261_1646	0.73	-1.7
1,734,802	+		Ga0059261_1646	0.73	+0.1
1,734,802	+		Ga0059261_1646	0.73	+0.7
1,734,803	-		Ga0059261_1646	0.73	+0.1
1,734,803	-		Ga0059261_1646	0.73	+0.2
1,734,803	-		Ga0059261_1646	0.73	+1.8
1,734,803	-		Ga0059261_1646	0.73	-1.5
1,734,803	-		Ga0059261_1646	0.73	+0.1
1,734,803	-		Ga0059261_1646	0.73	+0.1
1,734,803	-		Ga0059261_1646	0.73	-0.4
1,734,849	+		Ga0059261_1646	0.75	-0.5
1,735,125	+		Ga0059261_1646	0.86	-0.1
1,735,125	+		Ga0059261_1646	0.86	-0.3
1,735,132	+		Ga0059261_1646	0.86	+1.8
1,735,132	+		Ga0059261_1646	0.86	+1.9
1,735,132	+		Ga0059261_1646	0.86	+2.3
1,735,132	+				+1.5
1,735,132	+		Ga0059261_1646	0.86	-0.5
1,735,132	+		Ga0059261_1646	0.86	+0.9
1,735,132	+		Ga0059261_1646	0.86	-0.5
1,735,132	+		Ga0059261_1646	0.86	+4.1
1,735,133	-		Ga0059261_1646	0.86	-0.8
1,735,133	-		Ga0059261_1646	0.86	-1.1
1,735,133	-		Ga0059261_1646	0.86	-0.0
1,735,133	-		Ga0059261_1646	0.86	+0.9
1,735,133	-		Ga0059261_1646	0.86	+0.7
1,735,133	-		Ga0059261_1646	0.86	+0.7
1,735,613	+				+0.7
1,735,614	-				-1.4
1,735,709	+		Ga0059261_1647	0.14	-2.2
1,735,709	+		Ga0059261_1647	0.14	-0.3
1,735,709	+		Ga0059261_1647	0.14	-0.3
1,735,709	+		Ga0059261_1647	0.14	+1.7
1,735,709	+		Ga0059261_1647	0.14	-1.0
1,735,709	+		Ga0059261_1647	0.14	-0.9
1,735,709	+		Ga0059261_1647	0.14	-0.8
1,735,710	-		Ga0059261_1647	0.14	+1.3
1,735,710	-		Ga0059261_1647	0.14	-0.0
1,735,710	-		Ga0059261_1647	0.14	+1.4
1,735,710	-		Ga0059261_1647	0.14	-1.0
1,735,710	-		Ga0059261_1647	0.14	+0.1
1,735,710	-		Ga0059261_1647	0.14	-3.1
1,735,710	-		Ga0059261_1647	0.14	-0.4
1,735,716	+		Ga0059261_1647	0.14	-0.6
1,735,716	+		Ga0059261_1647	0.14	-1.7
1,735,716	+		Ga0059261_1647	0.14	-0.9
1,735,716	+		Ga0059261_1647	0.14	+0.5
1,735,716	+		Ga0059261_1647	0.14	-0.9
1,735,717	-		Ga0059261_1647	0.14	+0.5
1,735,717	-		Ga0059261_1647	0.14	+0.3
1,735,717	-		Ga0059261_1647	0.14	-0.0
1,735,717	-		Ga0059261_1647	0.14	-0.4
1,735,717	-		Ga0059261_1647	0.14	-0.6
1,735,804	+		Ga0059261_1647	0.19	-0.8
1,735,805	-		Ga0059261_1647	0.20	+1.5
1,735,920	+		Ga0059261_1647	0.26	-1.5
1,735,921	-		Ga0059261_1647	0.26	+2.8
1,736,001	+		Ga0059261_1647	0.31	-1.0
1,736,001	+		Ga0059261_1647	0.31	-0.0
1,736,007	+		Ga0059261_1647	0.32	+0.5
1,736,007	+		Ga0059261_1647	0.32	+0.0
1,736,007	+		Ga0059261_1647	0.32	-1.5
1,736,008	-		Ga0059261_1647	0.32	-0.3
1,736,015	+		Ga0059261_1647	0.32	+0.8
1,736,015	+		Ga0059261_1647	0.32	+0.5
1,736,015	+		Ga0059261_1647	0.32	-1.1
1,736,015	+		Ga0059261_1647	0.32	-1.0
1,736,016	-		Ga0059261_1647	0.32	-0.1
1,736,016	-		Ga0059261_1647	0.32	-0.8
1,736,082	+		Ga0059261_1647	0.36	+2.1
1,736,082	+		Ga0059261_1647	0.36	-0.1
1,736,083	-		Ga0059261_1647	0.36	-1.2
1,736,283	+		Ga0059261_1647	0.48	+0.1
1,736,283	+		Ga0059261_1647	0.48	+0.8
1,736,283	+		Ga0059261_1647	0.48	-0.6
1,736,283	+		Ga0059261_1647	0.48	-1.7
1,736,283	+				+2.5
1,736,283	+		Ga0059261_1647	0.48	+0.3
1,736,284	-		Ga0059261_1647	0.48	+0.5
1,736,379	+		Ga0059261_1647	0.54	-0.5
1,736,379	+		Ga0059261_1647	0.54	-1.2
1,736,412	+		Ga0059261_1647	0.56	+4.2
1,736,412	+		Ga0059261_1647	0.56	-1.0
1,736,412	+		Ga0059261_1647	0.56	+1.4
1,736,412	+		Ga0059261_1647	0.56	-2.2
1,736,412	+		Ga0059261_1647	0.56	+4.1
1,736,412	+		Ga0059261_1647	0.56	+0.5
1,736,412	+		Ga0059261_1647	0.56	+2.7
1,736,412	+		Ga0059261_1647	0.56	-1.8
1,736,413	-		Ga0059261_1647	0.56	+0.9
1,736,413	-		Ga0059261_1647	0.56	+0.1
1,736,508	+		Ga0059261_1647	0.61	-1.2
1,736,508	+		Ga0059261_1647	0.61	+0.2
1,736,509	-		Ga0059261_1647	0.61	-1.4
1,736,509	-		Ga0059261_1647	0.61	+0.5
1,736,509	-		Ga0059261_1647	0.61	+2.4
1,736,509	-		Ga0059261_1647	0.61	-0.5
1,736,509	-		Ga0059261_1647	0.61	+1.4
1,736,509	-		Ga0059261_1647	0.61	+2.5
1,736,509	-		Ga0059261_1647	0.61	+0.8
1,736,509	-		Ga0059261_1647	0.61	+0.2
1,736,509	-		Ga0059261_1647	0.61	+0.5
1,736,509	-		Ga0059261_1647	0.61	-2.5
1,736,509	-		Ga0059261_1647	0.61	+0.3
1,736,568	+		Ga0059261_1647	0.65	+0.9
1,736,568	+		Ga0059261_1647	0.65	+1.5
1,736,569	-		Ga0059261_1647	0.65	+3.9
1,736,569	-		Ga0059261_1647	0.65	-0.4
1,736,580	+		Ga0059261_1647	0.66	+0.9
1,736,580	+		Ga0059261_1647	0.66	-1.4
1,736,580	+		Ga0059261_1647	0.66	+1.2
1,736,581	-		Ga0059261_1647	0.66	-1.0
1,736,581	-		Ga0059261_1647	0.66	-1.4
1,736,581	-		Ga0059261_1647	0.66	+0.9
1,736,581	-		Ga0059261_1647	0.66	+2.4
1,736,581	-		Ga0059261_1647	0.66	+0.3
1,736,583	+		Ga0059261_1647	0.66	-0.0
1,736,583	+		Ga0059261_1647	0.66	-1.0
1,736,583	+		Ga0059261_1647	0.66	+0.0
1,736,583	+		Ga0059261_1647	0.66	-0.5
1,736,583	+		Ga0059261_1647	0.66	+1.0
1,736,583	+		Ga0059261_1647	0.66	+1.5
1,736,584	-		Ga0059261_1647	0.66	-1.1
1,736,584	-		Ga0059261_1647	0.66	+1.7
1,736,584	-		Ga0059261_1647	0.66	+0.7
1,736,584	-		Ga0059261_1647	0.66	+1.6
1,736,584	-		Ga0059261_1647	0.66	+1.9
1,737,017	+				+1.1
1,737,018	-				-0.5
1,737,138	+				-1.1
1,737,138	+				-0.4
1,737,138	+				+0.7
1,737,138	+				+2.3
1,737,139	-				-1.0
1,737,139	-				+0.1
1,737,156	+				+0.8
1,737,156	+				+1.5
1,737,156	+				-1.1
1,737,156	+				-1.1
1,737,156	+				+0.2
1,737,156	+				+2.6
1,737,156	+				-2.4
1,737,157	-				-1.9
1,737,157	-				-0.9
1,737,157	-				-0.8
1,737,157	-				+0.9
1,737,157	-				+1.5
1,737,157	-				-0.4
1,737,157	-				-0.5
1,737,157	-				+1.2
1,737,229	-				-1.0
1,737,229	-				-1.2
1,737,289	+		Ga0059261_1648	0.13	+0.7
1,737,289	+		Ga0059261_1648	0.13	-0.1
1,737,290	-		Ga0059261_1648	0.13	-1.0
1,737,386	+		Ga0059261_1648	0.23	+0.9
1,737,387	-		Ga0059261_1648	0.23	+0.3
1,737,387	-		Ga0059261_1648	0.23	-0.8
1,737,387	-		Ga0059261_1648	0.23	+0.8
1,737,645	+		Ga0059261_1648	0.48	-1.6
1,737,694	+		Ga0059261_1648	0.52	-1.5
1,737,709	+		Ga0059261_1648	0.54	-1.5
1,737,710	-		Ga0059261_1648	0.54	-0.4
1,737,736	+		Ga0059261_1648	0.57	-1.4
1,737,736	+		Ga0059261_1648	0.57	+1.7
1,737,736	+		Ga0059261_1648	0.57	-2.2
1,737,736	+		Ga0059261_1648	0.57	-0.9
1,737,736	+		Ga0059261_1648	0.57	-1.7
1,737,737	-		Ga0059261_1648	0.57	-0.6
1,737,737	-		Ga0059261_1648	0.57	-0.7
1,737,737	-		Ga0059261_1648	0.57	+0.7
1,737,737	-		Ga0059261_1648	0.57	+2.1
1,737,775	+		Ga0059261_1648	0.60	-1.0
1,737,775	+		Ga0059261_1648	0.60	-0.1
1,737,775	+		Ga0059261_1648	0.60	-1.9
1,737,932	-		Ga0059261_1648	0.75	-1.1
1,737,943	+		Ga0059261_1648	0.77	-0.1
1,737,943	+		Ga0059261_1648	0.77	+0.0
1,737,943	+		Ga0059261_1648	0.77	+3.3
1,737,943	+		Ga0059261_1648	0.77	+0.4
1,737,943	+		Ga0059261_1648	0.77	+1.6
1,737,943	+		Ga0059261_1648	0.77	-1.9
1,737,944	-		Ga0059261_1648	0.77	+0.3
1,737,944	-		Ga0059261_1648	0.77	+0.2
1,737,944	-		Ga0059261_1648	0.77	-0.8