Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1069

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
1,096,829	+		Ga0059261_1067	0.90	-0.2
1,096,829	+		Ga0059261_1067	0.90	-2.2
1,096,829	+		Ga0059261_1067	0.90	+2.1
1,096,829	+		Ga0059261_1067	0.90	-1.8
1,096,829	+		Ga0059261_1067	0.90	+1.3
1,096,830	-				+1.1
1,096,830	-				+1.1
1,096,830	-				+0.2
1,097,095	+		Ga0059261_1068	0.26	+0.1
1,097,095	+		Ga0059261_1068	0.26	+1.2
1,097,096	-		Ga0059261_1068	0.26	-0.4
1,097,096	-		Ga0059261_1068	0.26	-0.1
1,097,096	-		Ga0059261_1068	0.26	-1.1
1,097,096	-		Ga0059261_1068	0.26	+1.8
1,097,139	+		Ga0059261_1068	0.32	-0.6
1,097,139	+		Ga0059261_1068	0.32	+1.4
1,097,139	+		Ga0059261_1068	0.32	-2.0
1,097,139	+		Ga0059261_1068	0.32	-0.2
1,097,139	+		Ga0059261_1068	0.32	-0.3
1,097,139	+		Ga0059261_1068	0.32	-1.9
1,097,140	-		Ga0059261_1068	0.32	+0.6
1,097,140	-		Ga0059261_1068	0.32	-3.5
1,097,140	-		Ga0059261_1068	0.32	-2.4
1,097,140	-		Ga0059261_1068	0.32	-0.3
1,097,140	-		Ga0059261_1068	0.32	+0.1
1,097,224	+		Ga0059261_1068	0.43	+1.3
1,097,225	-		Ga0059261_1068	0.43	-0.7
1,097,225	-		Ga0059261_1068	0.43	-1.3
1,097,225	-				+0.3
1,097,225	-				+1.3
1,097,347	+		Ga0059261_1068	0.59	-2.2
1,097,347	+		Ga0059261_1068	0.59	-0.3
1,097,347	+		Ga0059261_1068	0.59	+0.8
1,097,347	+		Ga0059261_1068	0.59	-1.3
1,097,438	+		Ga0059261_1068	0.72	+3.0
1,097,438	+		Ga0059261_1068	0.72	-0.1
1,097,438	+		Ga0059261_1068	0.72	-0.7
1,097,438	+		Ga0059261_1068	0.72	-0.1
1,097,439	-		Ga0059261_1068	0.72	-1.7
1,097,439	-		Ga0059261_1068	0.72	+0.3
1,097,439	-		Ga0059261_1068	0.72	-0.8
1,097,643	-				+2.3
1,097,663	+				-0.0
1,097,663	+				-2.3
1,097,664	-				+1.0
1,097,664	-				-1.2
1,097,664	-				-0.3
1,097,699	-				+0.1
1,097,699	-				-1.7
1,097,699	-				-1.7
1,097,830	+				-0.5
1,097,830	+				-2.0
1,097,831	-				+0.0
1,097,831	-				+1.7
1,098,046	+		Ga0059261_1069	0.22	-0.5
1,098,046	+		Ga0059261_1069	0.22	-1.0
1,098,046	+		Ga0059261_1069	0.22	+0.7
1,098,046	+		Ga0059261_1069	0.22	+0.5
1,098,046	+		Ga0059261_1069	0.22	+2.3
1,098,047	-		Ga0059261_1069	0.22	-0.1
1,098,047	-		Ga0059261_1069	0.22	-0.7
1,098,047	-		Ga0059261_1069	0.22	-0.9
1,098,047	-		Ga0059261_1069	0.22	+0.8
1,098,047	-		Ga0059261_1069	0.22	-1.0
1,098,047	-				+0.3
1,098,047	-		Ga0059261_1069	0.22	+1.6
1,098,047	-		Ga0059261_1069	0.22	+0.3
1,098,452	+		Ga0059261_1069	0.47	+1.4
1,098,499	+		Ga0059261_1069	0.50	-2.5
1,098,499	+		Ga0059261_1069	0.50	-0.9
1,098,500	-		Ga0059261_1069	0.50	-0.6
1,098,500	-		Ga0059261_1069	0.50	+0.2
1,098,589	+		Ga0059261_1069	0.56	-0.0
1,098,590	-		Ga0059261_1069	0.56	+1.5
1,098,590	-		Ga0059261_1069	0.56	+2.3
1,098,605	+		Ga0059261_1069	0.57	+1.1
1,098,605	+		Ga0059261_1069	0.57	-0.2
1,098,605	+		Ga0059261_1069	0.57	-0.8
1,098,605	+		Ga0059261_1069	0.57	-1.4
1,098,606	-				-0.0
1,098,606	-		Ga0059261_1069	0.57	-1.0
1,098,606	-		Ga0059261_1069	0.57	-1.2
1,098,607	+		Ga0059261_1069	0.57	-1.4
1,098,607	+		Ga0059261_1069	0.57	-0.6
1,098,607	+		Ga0059261_1069	0.57	+0.3
1,098,607	+		Ga0059261_1069	0.57	-0.3
1,098,607	+				+1.3
1,098,607	+		Ga0059261_1069	0.57	+0.3
1,098,607	+		Ga0059261_1069	0.57	+1.0
1,098,607	+		Ga0059261_1069	0.57	-1.9
1,098,607	+		Ga0059261_1069	0.57	-0.9
1,098,607	+		Ga0059261_1069	0.57	-1.4
1,098,607	+		Ga0059261_1069	0.57	+0.0
1,098,607	+		Ga0059261_1069	0.57	-2.0
1,098,607	+		Ga0059261_1069	0.57	-0.5
1,098,607	+		Ga0059261_1069	0.57	+2.3
1,098,608	-		Ga0059261_1069	0.57	-1.4
1,098,608	-		Ga0059261_1069	0.57	-0.9
1,098,608	-		Ga0059261_1069	0.57	-0.4
1,098,608	-		Ga0059261_1069	0.57	-0.3
1,098,608	-		Ga0059261_1069	0.57	-0.4
1,098,608	-		Ga0059261_1069	0.57	-0.4
1,098,608	-		Ga0059261_1069	0.57	+0.3
1,098,608	-		Ga0059261_1069	0.57	-0.3
1,098,608	-		Ga0059261_1069	0.57	-1.2
1,098,608	-		Ga0059261_1069	0.57	-2.6
1,098,613	+		Ga0059261_1069	0.57	+3.6
1,098,613	+		Ga0059261_1069	0.57	+1.1
1,098,613	+		Ga0059261_1069	0.57	-0.3
1,098,613	+		Ga0059261_1069	0.57	+0.3
1,098,614	-		Ga0059261_1069	0.57	+0.4
1,098,614	-		Ga0059261_1069	0.57	+1.4
1,098,614	-		Ga0059261_1069	0.57	-0.2
1,098,614	-		Ga0059261_1069	0.57	+1.1
1,098,619	+		Ga0059261_1069	0.58	-1.0
1,098,706	+		Ga0059261_1069	0.63	+1.3
1,098,706	+		Ga0059261_1069	0.63	-1.8
1,098,706	+				-0.0
1,098,707	-		Ga0059261_1069	0.63	-1.2
1,098,707	-		Ga0059261_1069	0.63	-1.2
1,098,707	-		Ga0059261_1069	0.63	+0.3
1,098,707	-		Ga0059261_1069	0.63	-0.0
1,098,707	-		Ga0059261_1069	0.63	+0.4
1,098,707	-		Ga0059261_1069	0.63	-0.8
1,098,719	-		Ga0059261_1069	0.64	-1.3
1,098,719	-		Ga0059261_1069	0.64	-0.9
1,098,719	-		Ga0059261_1069	0.64	-1.2
1,098,719	-		Ga0059261_1069	0.64	-1.7
1,098,752	+		Ga0059261_1069	0.66	-2.0
1,098,753	-		Ga0059261_1069	0.66	+1.6
1,098,753	-		Ga0059261_1069	0.66	+0.1
1,098,763	+		Ga0059261_1069	0.67	+1.1
1,098,763	+		Ga0059261_1069	0.67	-0.9
1,098,763	+		Ga0059261_1069	0.67	-1.8
1,098,763	+		Ga0059261_1069	0.67	-1.2
1,098,763	+		Ga0059261_1069	0.67	-0.5
1,098,763	+		Ga0059261_1069	0.67	-1.2
1,098,764	-		Ga0059261_1069	0.67	+2.5
1,098,793	+		Ga0059261_1069	0.69	-1.6
1,098,793	+		Ga0059261_1069	0.69	-1.6
1,098,889	+		Ga0059261_1069	0.75	+0.6
1,098,889	+		Ga0059261_1069	0.75	+2.7
1,098,890	-		Ga0059261_1069	0.75	-1.4
1,098,919	+		Ga0059261_1069	0.77	-2.0
1,098,919	+		Ga0059261_1069	0.77	-3.5
1,098,919	+		Ga0059261_1069	0.77	-0.0
1,098,919	+		Ga0059261_1069	0.77	+1.5
1,098,919	+		Ga0059261_1069	0.77	-0.2
1,098,920	-		Ga0059261_1069	0.77	-1.9
1,098,920	-		Ga0059261_1069	0.77	-2.5
1,098,920	-		Ga0059261_1069	0.77	-1.5
1,098,920	-		Ga0059261_1069	0.77	+0.4
1,098,920	-		Ga0059261_1069	0.77	+0.5
1,098,920	-		Ga0059261_1069	0.77	-0.0
1,098,920	-		Ga0059261_1069	0.77	+1.3
1,098,920	-		Ga0059261_1069	0.77	-1.1
1,098,985	+		Ga0059261_1069	0.81	+1.8
1,098,985	+		Ga0059261_1069	0.81	-0.2
1,098,986	-		Ga0059261_1069	0.81	+2.3
1,098,986	-		Ga0059261_1069	0.81	+0.1
1,098,986	-		Ga0059261_1069	0.81	-0.1
1,098,986	-		Ga0059261_1069	0.81	+1.5
1,099,174	+				-1.0
1,099,174	+				+0.5
1,099,174	+				+0.8
1,099,174	+				+4.0
1,099,174	+				-1.0
1,099,174	+				-0.5
1,099,174	+				+3.0
1,099,175	-				+1.6
1,099,175	-				+1.3
1,099,175	-				+0.6
1,099,175	-				+0.7
1,099,175	-				-0.8
1,099,175	-				-1.5
1,099,175	-				-1.4
1,099,175	-				-0.8
1,099,175	-				-0.6
1,099,175	-				+0.4
1,099,207	+				-0.3
1,099,207	+				+4.8
1,099,207	+				+1.2
1,099,208	-				+3.2
1,099,208	-				+2.9
1,099,267	+				-0.5
1,099,595	+				+0.9
1,099,637	+				-1.8
1,099,637	+				-1.5
1,099,638	-				-1.8
1,099,638	-				-1.2
1,099,721	+		Ga0059261_1070	0.20	+0.2
1,099,721	+		Ga0059261_1070	0.20	+2.0
1,099,814	+		Ga0059261_1070	0.37	+0.4
1,099,829	+		Ga0059261_1070	0.40	-0.0
1,099,830	-		Ga0059261_1070	0.40	+0.3
1,099,830	-		Ga0059261_1070	0.40	+0.6
1,099,890	+		Ga0059261_1070	0.50	-0.9
1,099,891	-		Ga0059261_1070	0.51	+0.5
1,099,891	-		Ga0059261_1070	0.51	-0.2
1,099,971	+		Ga0059261_1070	0.65	+0.2
1,099,971	+		Ga0059261_1070	0.65	-1.4
1,099,971	+		Ga0059261_1070	0.65	+2.0
1,099,971	+		Ga0059261_1070	0.65	-0.2
1,099,972	-		Ga0059261_1070	0.65	+4.4
1,099,972	-		Ga0059261_1070	0.65	-1.2
1,099,972	-		Ga0059261_1070	0.65	+0.3
1,100,201	+				+0.6
1,100,201	+				-0.2
1,100,209	+				-0.8
1,100,209	+				+2.3
1,100,209	+				-0.4
1,100,209	+				+3.5
1,100,209	+				+0.3
1,100,209	+				+0.8
1,100,210	-				-0.8
1,100,210	-				-2.2
1,100,210	-				-1.7
1,100,210	-				+1.3
1,100,210	-				-0.4
1,100,210	-				+2.3
1,100,210	-				+0.4
1,100,210	-				-0.5
1,100,210	-				-2.7
1,100,241	+				-0.9