Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29900 and AO356_29905 are separated by 268 nucleotides AO356_29905 and AO356_29910 are separated by 293 nucleotides
AO356_29900: AO356_29900 - L-fucose dehydrogenase, at 6,953,683 to 6,954,867
_29900
AO356_29905: AO356_29905 - hypothetical protein, at 6,955,136 to 6,955,807
_29905
AO356_29910: AO356_29910 - hypothetical protein, at 6,956,101 to 6,956,556
_29910
Position (kb)
6955
6956 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6954.148 kb on - strand, within AO356_29900 at 6954.148 kb on - strand, within AO356_29900 at 6954.175 kb on + strand, within AO356_29900 at 6954.176 kb on - strand, within AO356_29900 at 6954.187 kb on + strand, within AO356_29900 at 6954.187 kb on + strand, within AO356_29900 at 6954.188 kb on - strand, within AO356_29900 at 6954.286 kb on - strand, within AO356_29900 at 6954.478 kb on + strand, within AO356_29900 at 6954.600 kb on + strand, within AO356_29900 at 6954.687 kb on + strand, within AO356_29900 at 6954.687 kb on + strand, within AO356_29900 at 6954.887 kb on + strand at 6954.888 kb on - strand at 6954.888 kb on - strand at 6954.975 kb on + strand at 6955.006 kb on - strand at 6955.088 kb on + strand at 6955.103 kb on - strand at 6955.110 kb on + strand at 6955.113 kb on + strand at 6955.114 kb on - strand at 6955.233 kb on + strand, within AO356_29905 at 6955.234 kb on - strand, within AO356_29905 at 6955.254 kb on + strand, within AO356_29905 at 6955.254 kb on + strand, within AO356_29905 at 6955.254 kb on + strand, within AO356_29905 at 6955.260 kb on + strand, within AO356_29905 at 6955.260 kb on + strand, within AO356_29905 at 6955.260 kb on + strand, within AO356_29905 at 6955.261 kb on - strand, within AO356_29905 at 6955.261 kb on - strand, within AO356_29905 at 6955.273 kb on + strand, within AO356_29905 at 6955.273 kb on + strand, within AO356_29905 at 6955.274 kb on - strand, within AO356_29905 at 6955.305 kb on + strand, within AO356_29905 at 6955.305 kb on + strand, within AO356_29905 at 6955.306 kb on - strand, within AO356_29905 at 6955.306 kb on - strand, within AO356_29905 at 6955.340 kb on - strand, within AO356_29905 at 6955.402 kb on - strand, within AO356_29905 at 6955.402 kb on - strand, within AO356_29905 at 6955.402 kb on - strand, within AO356_29905 at 6955.527 kb on + strand, within AO356_29905 at 6955.528 kb on - strand, within AO356_29905 at 6955.528 kb on - strand, within AO356_29905 at 6955.546 kb on - strand, within AO356_29905 at 6955.557 kb on + strand, within AO356_29905 at 6955.557 kb on + strand, within AO356_29905 at 6955.557 kb on + strand, within AO356_29905 at 6955.558 kb on - strand, within AO356_29905 at 6955.561 kb on - strand, within AO356_29905 at 6955.610 kb on - strand, within AO356_29905 at 6955.686 kb on + strand, within AO356_29905 at 6955.687 kb on - strand, within AO356_29905 at 6955.687 kb on - strand, within AO356_29905 at 6955.690 kb on + strand, within AO356_29905 at 6955.690 kb on + strand, within AO356_29905 at 6955.720 kb on + strand, within AO356_29905 at 6955.721 kb on - strand, within AO356_29905 at 6955.721 kb on - strand, within AO356_29905 at 6955.769 kb on + strand at 6955.827 kb on + strand at 6955.838 kb on + strand at 6955.927 kb on + strand at 6955.927 kb on + strand at 6955.927 kb on + strand at 6955.927 kb on + strand at 6955.928 kb on - strand at 6955.943 kb on - strand at 6955.943 kb on - strand at 6955.982 kb on + strand at 6955.982 kb on + strand at 6955.983 kb on - strand at 6955.983 kb on - strand at 6955.983 kb on - strand at 6955.983 kb on - strand at 6955.983 kb on - strand at 6955.983 kb on - strand at 6956.102 kb on + strand at 6956.102 kb on + strand at 6956.103 kb on - strand at 6956.107 kb on + strand at 6956.115 kb on - strand at 6956.176 kb on - strand, within AO356_29910 at 6956.194 kb on + strand, within AO356_29910 at 6956.194 kb on + strand, within AO356_29910 at 6956.194 kb on + strand, within AO356_29910 at 6956.194 kb on + strand, within AO356_29910 at 6956.194 kb on + strand, within AO356_29910 at 6956.194 kb on + strand, within AO356_29910 at 6956.195 kb on - strand, within AO356_29910 at 6956.195 kb on - strand, within AO356_29910 at 6956.211 kb on - strand, within AO356_29910 at 6956.306 kb on + strand, within AO356_29910 at 6956.311 kb on + strand, within AO356_29910 at 6956.312 kb on - strand, within AO356_29910 at 6956.312 kb on - strand, within AO356_29910 at 6956.533 kb on + strand at 6956.534 kb on - strand at 6956.534 kb on - strand at 6956.534 kb on - strand at 6956.608 kb on + strand at 6956.608 kb on + strand at 6956.608 kb on + strand at 6956.608 kb on + strand at 6956.609 kb on - strand at 6956.609 kb on - strand at 6956.609 kb on - strand at 6956.609 kb on - strand at 6956.645 kb on + strand at 6956.645 kb on + strand at 6956.656 kb on + strand at 6956.681 kb on - strand at 6956.714 kb on - strand at 6956.760 kb on - strand at 6956.790 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 6,954,148 - AO356_29900 0.39 +1.6 6,954,148 - AO356_29900 0.39 +0.6 6,954,175 + AO356_29900 0.42 +1.6 6,954,176 - AO356_29900 0.42 -0.2 6,954,187 + AO356_29900 0.43 +0.3 6,954,187 + AO356_29900 0.43 +0.6 6,954,188 - AO356_29900 0.43 +0.3 6,954,286 - AO356_29900 0.51 +0.5 6,954,478 + AO356_29900 0.67 -0.2 6,954,600 + AO356_29900 0.77 -0.5 6,954,687 + AO356_29900 0.85 +1.8 6,954,687 + AO356_29900 0.85 -0.5 6,954,887 + +1.3 6,954,888 - -0.7 6,954,888 - +0.2 6,954,975 + +0.3 6,955,006 - +0.1 6,955,088 + +1.6 6,955,103 - +0.6 6,955,110 + -1.6 6,955,113 + -0.2 6,955,114 - +1.1 6,955,233 + AO356_29905 0.14 -0.4 6,955,234 - AO356_29905 0.15 -0.3 6,955,254 + AO356_29905 0.18 -0.1 6,955,254 + AO356_29905 0.18 -0.4 6,955,254 + AO356_29905 0.18 -0.4 6,955,260 + AO356_29905 0.18 -2.2 6,955,260 + AO356_29905 0.18 -0.5 6,955,260 + AO356_29905 0.18 -0.7 6,955,261 - AO356_29905 0.19 +0.1 6,955,261 - AO356_29905 0.19 -0.6 6,955,273 + AO356_29905 0.20 +0.8 6,955,273 + AO356_29905 0.20 +0.9 6,955,274 - AO356_29905 0.21 -0.0 6,955,305 + AO356_29905 0.25 -1.3 6,955,305 + AO356_29905 0.25 +0.5 6,955,306 - AO356_29905 0.25 -0.1 6,955,306 - AO356_29905 0.25 +0.6 6,955,340 - AO356_29905 0.30 -0.1 6,955,402 - AO356_29905 0.40 +0.4 6,955,402 - AO356_29905 0.40 +0.4 6,955,402 - AO356_29905 0.40 -0.5 6,955,527 + AO356_29905 0.58 +1.3 6,955,528 - AO356_29905 0.58 +0.5 6,955,528 - AO356_29905 0.58 +0.1 6,955,546 - AO356_29905 0.61 +0.3 6,955,557 + AO356_29905 0.63 +0.2 6,955,557 + AO356_29905 0.63 +1.1 6,955,557 + AO356_29905 0.63 +0.9 6,955,558 - AO356_29905 0.63 -0.1 6,955,561 - AO356_29905 0.63 -0.8 6,955,610 - AO356_29905 0.71 +0.2 6,955,686 + AO356_29905 0.82 -0.5 6,955,687 - AO356_29905 0.82 +0.0 6,955,687 - AO356_29905 0.82 +0.5 6,955,690 + AO356_29905 0.82 +0.7 6,955,690 + AO356_29905 0.82 +0.1 6,955,720 + AO356_29905 0.87 +0.9 6,955,721 - AO356_29905 0.87 -0.1 6,955,721 - AO356_29905 0.87 +0.6 6,955,769 + -0.5 6,955,827 + +0.5 6,955,838 + -0.4 6,955,927 + -0.2 6,955,927 + -1.3 6,955,927 + +2.4 6,955,927 + +0.4 6,955,928 - +1.1 6,955,943 - +0.0 6,955,943 - +0.2 6,955,982 + -0.2 6,955,982 + +0.3 6,955,983 - +0.8 6,955,983 - +0.5 6,955,983 - -0.3 6,955,983 - -0.6 6,955,983 - +0.2 6,955,983 - +0.7 6,956,102 + +0.4 6,956,102 + +0.4 6,956,103 - -0.1 6,956,107 + -0.6 6,956,115 - +1.5 6,956,176 - AO356_29910 0.16 -0.5 6,956,194 + AO356_29910 0.20 +0.7 6,956,194 + AO356_29910 0.20 -0.3 6,956,194 + AO356_29910 0.20 -1.2 6,956,194 + AO356_29910 0.20 -1.8 6,956,194 + AO356_29910 0.20 +0.9 6,956,194 + AO356_29910 0.20 -0.9 6,956,195 - AO356_29910 0.21 +0.4 6,956,195 - AO356_29910 0.21 -0.5 6,956,211 - AO356_29910 0.24 +0.5 6,956,306 + AO356_29910 0.45 -1.0 6,956,311 + AO356_29910 0.46 -0.3 6,956,312 - AO356_29910 0.46 +0.4 6,956,312 - AO356_29910 0.46 +0.0 6,956,533 + -0.5 6,956,534 - -0.8 6,956,534 - +0.0 6,956,534 - +0.2 6,956,608 + +1.7 6,956,608 + +0.9 6,956,608 + +0.6 6,956,608 + +0.8 6,956,609 - -0.5 6,956,609 - +0.2 6,956,609 - -0.4 6,956,609 - +0.7 6,956,645 + -0.2 6,956,645 + +0.6 6,956,656 + -0.2 6,956,681 - +0.7 6,956,714 - +0.2 6,956,760 - -0.9 6,956,790 + +1.1
Or see this region's nucleotide sequence